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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170023829
BCQL01005354
449417
Actinomycetota
TTG
Gln
>WENV170023926
BCQL01009966
449417
Actinomycetota
TTG
Gln
>WENV170023709
BCQL01001450
380583
Actinomycetota
GAC
Val
>WENV170024320
BCQL01042158
380583
Actinomycetota
GAC
Val
>WENV170024683
BCQL01097463
380583
Actinomycetota
GAC
Val
>WENV170023759
BCQL01002674
269039
Actinomycetota
CAT
Met
>WENV170023661
BCQL01000981
41960
Actinomycetota
GGA
Ser
>WENV170023652
BCQL01000721
271638
Actinomycetota
GTG
His
>WENV170023718
BCQL01001690
271638
Actinomycetota
GTG
His
>WENV170024203
BCQL01029967
271638
Actinomycetota
GTG
His
>WENV170024476
BCQL01065050
88644
Actinomycetota
CAG
Leu
>WENV170024326
BCQL01043056
170891
Actinomycetota
CAA
Leu
>WENV170023639
BCQL01000543
257231
Actinomycetota
CCG
Arg
>WENV170023788
BCQL01003622
316103
Actinomycetota
>WENV170024207
BCQL01030457
177374
Actinomycetota
TAA
Leu
>WENV170024106
BCQL01020484
260088
Actinomycetota
CGC
Ala
>WENV170023752
BCQL01002442
275554
Actinomycetota
TTC
Glu
>WENV170023663
BCQL01001014
368997
Actinomycetota
CAC
Val
>WENV170023724
BCQL01001963
368997
Actinomycetota
CAC
Val
>WENV170024585
BCQL01078814
368997
Actinomycetota
CAC
Val
>WENV170023790
BCQL01003622
163308
Actinomycetota
GAA
Phe
>WENV170024895
BCQL01152870
2658
Actinomycetota
>WENV170023708
BCQL01001450
370271
Actinomycetota
GCA
Cys
>WENV170024098
BCQL01019593
169790
Actinomycetota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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