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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170024478
BCQL01066017
458586
Alphaproteobacteria
GCA
Cys
>WENV170024034
BCQL01016491
370165
Alphaproteobacteria
TTC
Glu
>WENV170024619
BCQL01085851
370165
Alphaproteobacteria
TTC
Glu
>WENV170024229
BCQL01031764
214179
Alphaproteobacteria
CCT
Arg
>WENV170025084
BCQL01204854
214179
Alphaproteobacteria
CCT
Arg
>WENV170025057
BCQL01197871
453062
Alphaproteobacteria
CCC
Gly
>WENV170024007
BCQL01015235
380834
Alphaproteobacteria
GAA
Phe
>WENV170025202
BCQL01250514
380834
Alphaproteobacteria
GAA
Phe
>WENV170024479
BCQL01066017
261049
Alphaproteobacteria
CGT
Thr
>WENV170025048
BCQL01196467
261049
Alphaproteobacteria
CGT
Thr
>WENV170023815
BCQL01004992
32838
Alphaproteobacteria
GCT
Ser
>WENV170024101
BCQL01019988
32838
Alphaproteobacteria
GCT
Ser
>WENV170025186
BCQL01245823
32838
Alphaproteobacteria
GCT
Ser
>WENV170024360
BCQL01047222
309312
Alphaproteobacteria
TGC
Ala
>WENV170025295
BCQL01280017
393349
Alphaproteobacteria
GGT
Thr
>WENV170023880
BCQL01007506
169712
Alphaproteobacteria
TGG
Pro
>WENV170024227
BCQL01031276
448267
Alphaproteobacteria
GCA
Cys
>WENV170023899
BCQL01009149
159281
Alphaproteobacteria
GTG
His
>WENV170024132
BCQL01022810
33988
Alphaproteobacteria
CGA
Ser
>WENV170023757
BCQL01002668
462157
Alphaproteobacteria
TCC
Gly
>WENV170023631
BCQL01000356
35006
Alphaproteobacteria
CGA
Ser
>WENV170023866
BCQL01006965
35006
Alphaproteobacteria
CGA
Ser
>WENV170024309
BCQL01041730
35006
Alphaproteobacteria
CGA
Ser
>WENV170023998
BCQL01014136
114680
Alphaproteobacteria
TAG
Leu
>WENV170023792
BCQL01003764
406246
Alphaproteobacteria
GCC
Gly
>WENV170023722
BCQL01001756
76380
Alphaproteobacteria
GAG
Leu
>WENV170023796
BCQL01003850
76380
Alphaproteobacteria
GAG
Leu
>WENV170025339
BCQL01289260
448346
Alphaproteobacteria
CCC
Gly
>WENV170023750
BCQL01002336
26205
Alphaproteobacteria
GGA
Ser
>WENV170024422
BCQL01058033
26205
Alphaproteobacteria
GGA
Ser
>WENV170025019
BCQL01184164
26205
Alphaproteobacteria
GGA
Ser
>WENV170025066
BCQL01199986
26205
Alphaproteobacteria
GGA
Ser
>WENV170023721
BCQL01001753
159474
Alphaproteobacteria
ACG
Arg
>WENV170024860
BCQL01143194
159474
Alphaproteobacteria
ACG
Arg
>WENV170024559
BCQL01075042
206052
Alphaproteobacteria
>WENV170024397
BCQL01053706
369406
Alphaproteobacteria
GAC
Val
>WENV170024930
BCQL01163608
67024
Alphaproteobacteria
TAA
Leu
>WENV170024447
BCQL01062091
167092
Alphaproteobacteria
GAT
Ile
>WENV170025324
BCQL01285422
178359
Alphaproteobacteria
GTG
His
>WENV170024105
BCQL01020126
89275
Alphaproteobacteria
GAG
Leu
>WENV170023765
BCQL01002768
189424
Alphaproteobacteria
CAT
Met
>WENV170023910
BCQL01009442
189424
Alphaproteobacteria
CAT
Met
>WENV170023640
BCQL01000547
26306
Alphaproteobacteria
TGA
Ser
>WENV170024809
BCQL01133504
26306
Alphaproteobacteria
TGA
Ser
>WENV170024918
BCQL01158850
26306
Alphaproteobacteria
TGA
Ser
>WENV170025185
BCQL01245570
26306
Alphaproteobacteria
TGA
Ser
>WENV170025228
BCQL01259944
26306
Alphaproteobacteria
TGA
Ser
>WENV170025361
BCQL01300273
26306
Alphaproteobacteria
TGA
Ser
>WENV170023911
BCQL01009450
258842
Alphaproteobacteria
CGT
Thr
>WENV170024387
BCQL01051925
88722
Alphaproteobacteria
CAG
Leu
>WENV170023751
BCQL01002393
377404
Alphaproteobacteria
GAC
Val
>WENV170024143
BCQL01023484
377404
Alphaproteobacteria
GAC
Val
>WENV170024609
BCQL01084140
377404
Alphaproteobacteria
GAC
Val
>WENV170025259
BCQL01269941
377404
Alphaproteobacteria
GAC
Val
>WENV170024599
BCQL01082445
175700
Alphaproteobacteria
TGG
Pro
>WENV170023712
BCQL01001572
139123
Alphaproteobacteria
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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