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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
151 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170026850
CDTY01009229
257966
Bacillota
CCA
Trp
>WENV170027102
CDTY01018560
271702
Bacillota
TGT
Thr
>WENV170026687
CDTY01003608
257969
Bacillota
TAC
Val
>WENV170027173
CDTY01021056
257969
Bacillota
TAC
Val
>WENV170027002
CDTY01015075
172175
Bacillota
GAC
Val
>WENV170026627
CDTY01000890
159235
Bacillota
GTC
Asp
>WENV170026688
CDTY01003608
159235
Bacillota
GTC
Asp
>WENV170026851
CDTY01009229
159235
Bacillota
GTC
Asp
>WENV170026959
CDTY01013192
159235
Bacillota
GTC
Asp
>WENV170027711
CDTY01042284
159235
Bacillota
GTC
Asp
>WENV170027302
CDTY01025762
19350
Bacillota
GCT
Ser
>WENV170027137
CDTY01019424
26185
Bacillota
TAA
Leu
>WENV170026626
CDTY01000890
257968
Bacillota
GCC
Gly
>WENV170026686
CDTY01003608
257968
Bacillota
GCC
Gly
>WENV170026690
CDTY01003608
257968
Bacillota
GCC
Gly
>WENV170027172
CDTY01021056
257968
Bacillota
GCC
Gly
>WENV170027185
CDTY01021381
257968
Bacillota
GCC
Gly
>WENV170027564
CDTY01037015
257968
Bacillota
GCC
Gly
>WENV170027576
CDTY01037785
257968
Bacillota
GCC
Gly
>WENV170027710
CDTY01042284
257968
Bacillota
GCC
Gly
>WENV170027712
CDTY01042284
257968
Bacillota
GCC
Gly
>WENV170027915
CDTY01050054
378043
Bacillota
>WENV170026693
CDTY01003609
88717
Bacillota
GTA
Tyr
>WENV170027404
CDTY01030167
88717
Bacillota
GTA
Tyr
>WENV170027551
CDTY01035769
88717
Bacillota
GTA
Tyr
>WENV170027489
CDTY01033397
182164
Bacillota
CGG
Pro
>WENV170027794
CDTY01045685
369809
Bacillota
CTC
Glu
>WENV170027682
CDTY01041366
182782
Bacillota
ACG
Arg
>WENV170027683
CDTY01041366
182782
Bacillota
ACG
Arg
>WENV170027686
CDTY01041786
269920
Bacillota
CGC
Ala
>WENV170027759
CDTY01044112
269920
Bacillota
CGC
Ala
>WENV170026625
CDTY01000890
257970
Bacillota
GAA
Phe
>WENV170026689
CDTY01003608
257970
Bacillota
GAA
Phe
>WENV170027184
CDTY01021381
257970
Bacillota
GAA
Phe
>WENV170027709
CDTY01042284
257970
Bacillota
GAA
Phe
>WENV170027832
CDTY01047063
257970
Bacillota
GAA
Phe
>WENV170027131
CDTY01019424
258075
Bacillota
TAC
Val
>WENV170026905
CDTY01011170
257963
Bacillota
>WENV170026958
CDTY01013192
319387
Bacillota
CCA
Trp
>WENV170026736
CDTY01005745
270601
Bacillota
TTT
Lys
>WENV170027439
CDTY01031124
270601
Bacillota
TTT
Lys
>WENV170026604
CDTY01000048
159242
Bacillota
CCG
Arg
>WENV170028026
CDTY01054318
159242
Bacillota
CCG
Arg
>WENV170026997
CDTY01015072
131004
Bacillota
TAG
Leu
>WENV170027279
CDTY01025026
160738
Bacillota
TCT
Arg
>WENV170026752
CDTY01006221
161902
Bacillota
CAT
Met
>WENV170027629
CDTY01040393
161902
Bacillota
CAT
Met
>WENV170026718
CDTY01005290
257972
Bacillota
CGG
Pro
>WENV170026886
CDTY01010663
257972
Bacillota
CGG
Pro
>WENV170027863
CDTY01048315
257972
Bacillota
CGG
Pro
>WENV170026796
CDTY01007137
64854
Bacillota
TAA
Leu
>WENV170027001
CDTY01015072
124618
Bacillota
GAG
Leu
>WENV170027096
CDTY01018509
124618
Bacillota
GAG
Leu
>WENV170026717
CDTY01005290
448255
Bacillota
CTG
Gln
>WENV170026818
CDTY01008035
448255
Bacillota
CTG
Gln
>WENV170026853
CDTY01009237
448255
Bacillota
CTG
Gln
>WENV170026885
CDTY01010663
448255
Bacillota
CTG
Gln
>WENV170026977
CDTY01014179
448255
Bacillota
CTG
Gln
>WENV170027174
CDTY01021068
448255
Bacillota
CTG
Gln
>WENV170027267
CDTY01024602
448255
Bacillota
CTG
Gln
>WENV170027862
CDTY01048315
448255
Bacillota
CTG
Gln
>WENV170027241
CDTY01023774
159234
Bacillota
CAC
Val
>WENV170027620
CDTY01039420
159234
Bacillota
CAC
Val
>WENV170027887
CDTY01049216
159234
Bacillota
CAC
Val
>WENV170027106
CDTY01018560
172174
Bacillota
CAT
Met
>WENV170027905
CDTY01050038
162688
Bacillota
GAT
Ile
>WENV170028058
CDTY01055436
162688
Bacillota
GAT
Ile
>WENV170027103
CDTY01018560
107867
Bacillota
GTA
Tyr
>WENV170027827
CDTY01046767
159245
Bacillota
GTG
His
>WENV170027463
CDTY01031916
159237
Bacillota
TCT
Arg
>WENV170027563
CDTY01036982
159237
Bacillota
TCT
Arg
>WENV170027826
CDTY01046767
159237
Bacillota
TCT
Arg
>WENV170027543
CDTY01035765
90522
Bacillota
CAG
Leu
>WENV170026730
CDTY01005650
138905
Bacillota
GGG
Pro
>WENV170027661
CDTY01040866
374673
Bacillota
CTC
Glu
>WENV170027885
CDTY01049209
374673
Bacillota
CTC
Glu
>WENV170027113
CDTY01018999
105206
Bacillota
GTA
Tyr
>WENV170027616
CDTY01039202
105206
Bacillota
GTA
Tyr
>WENV170027130
CDTY01019424
189541
Bacillota
GTC
Asp
>WENV170027097
CDTY01018509
131005
Bacillota
TAG
Leu
>WENV170026884
CDTY01010663
158271
Bacillota
CCT
Arg
>WENV170026601
CDTY01000048
369393
Bacillota
TTC
Glu
>WENV170026954
CDTY01012962
369393
Bacillota
TTC
Glu
>WENV170027422
CDTY01030542
293959
Bacillota
GGC
Ala
>WENV170027881
CDTY01048977
293959
Bacillota
GGC
Ala
>WENV170026998
CDTY01015072
64857
Bacillota
TAA
Leu
>WENV170026692
CDTY01003609
369390
Bacillota
TGT
Thr
>WENV170027550
CDTY01035769
369390
Bacillota
TGT
Thr
>WENV170027622
CDTY01039657
369390
Bacillota
TGT
Thr
>WENV170027771
CDTY01044589
369282
Bacillota
CCT
Arg
>WENV170028029
CDTY01054476
166292
Bacillota
GAT
Ile
>WENV170027297
CDTY01025762
271703
Bacillota
GTG
His
>WENV170026624
CDTY01000890
11993
Bacillota
GGA
Ser
>WENV170026870
CDTY01009868
11993
Bacillota
GGA
Ser
>WENV170027695
CDTY01041787
42123
Bacillota
TAA
Leu
>WENV170027000
CDTY01015072
159246
Bacillota
CGC
Ala
>WENV170026774
CDTY01006613
49796
Bacillota
TGA
Ser
>WENV170027871
CDTY01048772
49796
Bacillota
TGA
Ser
>WENV170027921
CDTY01050221
49796
Bacillota
TGA
Ser
>WENV170026803
CDTY01007272
450457
Bacillota
CTG
Gln
>WENV170027128
CDTY01019407
265643
Bacillota
GTT
Asn
>WENV170027287
CDTY01025407
5393
Bacillota
GCT
Ser
>WENV170027872
CDTY01048772
5393
Bacillota
GCT
Ser
>WENV170027298
CDTY01025762
308738
Bacillota
TTG
Gln
>WENV170027751
CDTY01044066
275448
Bacillota
TGC
Ala
>WENV170028028
CDTY01054476
320672
Bacillota
TGC
Ala
>WENV170026605
CDTY01000152
448256
Bacillota
TTG
Gln
>WENV170026957
CDTY01013150
448256
Bacillota
TTG
Gln
>WENV170027784
CDTY01045367
448256
Bacillota
TTG
Gln
>WENV170027907
CDTY01050046
167205
Bacillota
TAC
Val
>WENV170027692
CDTY01041787
296620
Bacillota
GAA
Phe
>WENV170027767
CDTY01044178
296620
Bacillota
GAA
Phe
>WENV170027467
CDTY01032054
171332
Bacillota
CGG
Pro
>WENV170027886
CDTY01049209
283213
Bacillota
CTT
Lys
>WENV170026720
CDTY01005333
131046
Bacillota
TAG
Leu
>WENV170027300
CDTY01025762
125410
Bacillota
TAG
Leu
>WENV170026980
CDTY01014528
162489
Bacillota
GTC
Asp
>WENV170027433
CDTY01031124
162489
Bacillota
GTC
Asp
>WENV170027105
CDTY01018560
265662
Bacillota
GGT
Thr
>WENV170026694
CDTY01003609
159236
Bacillota
GTT
Asn
>WENV170026701
CDTY01004042
159236
Bacillota
GTT
Asn
>WENV170027228
CDTY01023286
159236
Bacillota
GTT
Asn
>WENV170027837
CDTY01047105
159236
Bacillota
GTT
Asn
>WENV170027874
CDTY01048772
159236
Bacillota
GTT
Asn
>WENV170028053
CDTY01055381
159236
Bacillota
GTT
Asn
>WENV170026691
CDTY01003608
257976
Bacillota
CCC
Gly
>WENV170026923
CDTY01012396
257976
Bacillota
CCC
Gly
>WENV170027753
CDTY01044083
257976
Bacillota
CCC
Gly
>WENV170027529
CDTY01035349
172176
Bacillota
TGG
Pro
>WENV170027274
CDTY01025000
237000
Bacillota
TCT
Arg
>WENV170026676
CDTY01002974
258131
Bacillota
TGT
Thr
>WENV170028002
CDTY01053248
133321
Bacillota
TAG
Leu
>WENV170027713
CDTY01042284
369392
Bacillota
GCA
Cys
>WENV170027565
CDTY01037015
369392
Bacillota
GCA
Cys
>WENV170027299
CDTY01025762
292274
Bacillota
TTT
Lys
>WENV170027607
CDTY01038780
292274
Bacillota
TTT
Lys
>WENV170027659
CDTY01040833
257965
Bacillota
TGG
Pro
>WENV170027861
CDTY01048315
257965
Bacillota
TGG
Pro
>WENV170026861
CDTY01009371
64855
Bacillota
CAG
Leu
>WENV170027403
CDTY01030167
64855
Bacillota
CAG
Leu
>WENV170027828
CDTY01046767
64855
Bacillota
CAG
Leu
>WENV170027464
CDTY01031916
159238
Bacillota
GTG
His
>WENV170027032
CDTY01016368
172178
Bacillota
GGG
Pro
>WENV170027707
CDTY01042237
51347
Bacillota
CGA
Ser
>WENV170026820
CDTY01008051
369391
Bacillota
TCC
Gly
>WENV170027882
CDTY01048977
369391
Bacillota
TCC
Gly
>WENV170027964
CDTY01052238
369391
Bacillota
TCC
Gly
>WENV170027169
CDTY01020751
222762
Bacillota
GTC
Asp
>WENV170027908
CDTY01050046
222762
Bacillota
GTC
Asp
>WENV170027419
CDTY01030413
283545
Bacillota
GTT
Asn
>WENV170027554
CDTY01036095
283545
Bacillota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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