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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
190 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170027760
CDTY01044117
152201
Bacteroidota
TAC
Val
>WENV170027761
CDTY01044117
152201
Bacteroidota
TAC
Val
>WENV170027917
CDTY01050055
152201
Bacteroidota
TAC
Val
>WENV170026663
CDTY01002710
449143
Bacteroidota
TTG
Gln
>WENV170026841
CDTY01008940
161400
Bacteroidota
>WENV170027728
CDTY01042848
105959
Bacteroidota
TAG
Leu
>WENV170027056
CDTY01017696
26247
Bacteroidota
CGA
Ser
>WENV170027768
CDTY01044542
65502
Bacteroidota
CAA
Leu
>WENV170027812
CDTY01046187
166871
Bacteroidota
TCT
Arg
>WENV170027163
CDTY01020303
236813
Bacteroidota
GTC
Asp
>WENV170028003
CDTY01053259
236813
Bacteroidota
GTC
Asp
>WENV170027306
CDTY01026106
478101
Bacteroidota
CTG
Gln
>WENV170026888
CDTY01010667
371247
Bacteroidota
TTC
Glu
>WENV170027527
CDTY01035244
448691
Bacteroidota
TTG
Gln
>WENV170027790
CDTY01045535
448691
Bacteroidota
TTG
Gln
>WENV170028022
CDTY01054072
448691
Bacteroidota
TTG
Gln
>WENV170026654
CDTY01002236
160436
Bacteroidota
GGC
Ala
>WENV170027138
CDTY01019431
160436
Bacteroidota
GGC
Ala
>WENV170026824
CDTY01008448
23774
Bacteroidota
GGA
Ser
>WENV170027912
CDTY01050052
118224
Bacteroidota
TAG
Leu
>WENV170027500
CDTY01033677
286278
Bacteroidota
TTT
Lys
>WENV170027608
CDTY01038784
286278
Bacteroidota
TTT
Lys
>WENV170027919
CDTY01050117
286278
Bacteroidota
TTT
Lys
>WENV170027586
CDTY01038300
258780
Bacteroidota
>WENV170027898
CDTY01049632
258780
Bacteroidota
>WENV170027985
CDTY01052771
258780
Bacteroidota
>WENV170027986
CDTY01052771
258780
Bacteroidota
>WENV170026778
CDTY01006683
49944
Bacteroidota
TAA
Leu
>WENV170026941
CDTY01012855
49944
Bacteroidota
TAA
Leu
>WENV170027322
CDTY01027388
162515
Bacteroidota
GAT
Ile
>WENV170027778
CDTY01045007
371226
Bacteroidota
CCT
Arg
>WENV170027525
CDTY01035014
54117
Bacteroidota
TGA
Ser
>WENV170027040
CDTY01016864
182139
Bacteroidota
CGG
Pro
>WENV170027852
CDTY01047960
182139
Bacteroidota
CGG
Pro
>WENV170026756
CDTY01006224
139254
Bacteroidota
GAC
Val
>WENV170027039
CDTY01016861
371242
Bacteroidota
CCT
Arg
>WENV170027809
CDTY01046140
371242
Bacteroidota
CCT
Arg
>WENV170027823
CDTY01046704
38349
Bacteroidota
CGA
Ser
>WENV170027479
CDTY01032739
18662
Bacteroidota
GGA
Ser
>WENV170027845
CDTY01047468
259292
Bacteroidota
CGT
Thr
>WENV170026839
CDTY01008933
26362
Bacteroidota
GCT
Ser
>WENV170027409
CDTY01030176
449113
Bacteroidota
GCA
Cys
>WENV170027640
CDTY01040469
261339
Bacteroidota
CCA
Trp
>WENV170027663
CDTY01040920
101772
Bacteroidota
GTA
Tyr
>WENV170027850
CDTY01047493
101772
Bacteroidota
GTA
Tyr
>WENV170027875
CDTY01048773
101772
Bacteroidota
GTA
Tyr
>WENV170027951
CDTY01051664
101772
Bacteroidota
GTA
Tyr
>WENV170027643
CDTY01040469
105937
Bacteroidota
GTA
Tyr
>WENV170027721
CDTY01042679
105937
Bacteroidota
GTA
Tyr
>WENV170026698
CDTY01003725
65517
Bacteroidota
CAG
Leu
>WENV170027083
CDTY01017726
50713
Bacteroidota
TGA
Ser
>WENV170026595
CDTY01000014
162517
Bacteroidota
GTT
Asn
>WENV170026596
CDTY01000014
162517
Bacteroidota
GTT
Asn
>WENV170026785
CDTY01006705
162517
Bacteroidota
GTT
Asn
>WENV170026786
CDTY01006705
162517
Bacteroidota
GTT
Asn
>WENV170026787
CDTY01006705
162517
Bacteroidota
GTT
Asn
>WENV170027639
CDTY01040469
261338
Bacteroidota
GTT
Asn
>WENV170027776
CDTY01044953
159589
Bacteroidota
>WENV170027017
CDTY01015534
452097
Bacteroidota
CTG
Gln
>WENV170026745
CDTY01005792
374505
Bacteroidota
CTC
Glu
>WENV170026840
CDTY01008933
374505
Bacteroidota
CTC
Glu
>WENV170027047
CDTY01017248
374505
Bacteroidota
CTC
Glu
>WENV170026864
CDTY01009807
154165
Bacteroidota
GGG
Pro
>WENV170027028
CDTY01016361
154165
Bacteroidota
GGG
Pro
>WENV170027252
CDTY01024134
154165
Bacteroidota
GGG
Pro
>WENV170027348
CDTY01028047
154165
Bacteroidota
GGG
Pro
>WENV170027967
CDTY01052316
154165
Bacteroidota
GGG
Pro
>WENV170027609
CDTY01038801
159918
Bacteroidota
GTG
His
>WENV170027236
CDTY01023676
159413
Bacteroidota
>WENV170027237
CDTY01023676
159413
Bacteroidota
>WENV170026946
CDTY01012881
124700
Bacteroidota
>WENV170026949
CDTY01012881
124700
Bacteroidota
>WENV170027059
CDTY01017697
124700
Bacteroidota
>WENV170027062
CDTY01017697
124700
Bacteroidota
>WENV170027065
CDTY01017697
124700
Bacteroidota
>WENV170027067
CDTY01017697
124700
Bacteroidota
>WENV170027972
CDTY01052708
124700
Bacteroidota
>WENV170027975
CDTY01052708
124700
Bacteroidota
>WENV170027978
CDTY01052708
124700
Bacteroidota
>WENV170027980
CDTY01052708
124700
Bacteroidota
>WENV170026798
CDTY01007152
161250
Bacteroidota
GTT
Asn
>WENV170026799
CDTY01007152
161250
Bacteroidota
GTT
Asn
>WENV170026800
CDTY01007152
161250
Bacteroidota
GTT
Asn
>WENV170026801
CDTY01007152
161250
Bacteroidota
GTT
Asn
>WENV170026802
CDTY01007152
161250
Bacteroidota
GTT
Asn
>WENV170026983
CDTY01014597
161250
Bacteroidota
GTT
Asn
>WENV170026984
CDTY01014597
161250
Bacteroidota
GTT
Asn
>WENV170027775
CDTY01044949
161250
Bacteroidota
GTT
Asn
>WENV170026902
CDTY01011114
153591
Bacteroidota
TGG
Pro
>WENV170027855
CDTY01047981
293347
Bacteroidota
CCA
Trp
>WENV170027880
CDTY01048927
293347
Bacteroidota
CCA
Trp
>WENV170026834
CDTY01008900
120345
Bacteroidota
TAG
Leu
>WENV170028059
CDTY01055438
120345
Bacteroidota
TAG
Leu
>WENV170026781
CDTY01006696
238847
Bacteroidota
GGC
Ala
>WENV170027612
CDTY01038837
205503
Bacteroidota
GTG
His
>WENV170027664
CDTY01040936
370133
Bacteroidota
CCG
Arg
>WENV170026890
CDTY01010667
449098
Bacteroidota
>WENV170027368
CDTY01028779
105470
Bacteroidota
TAG
Leu
>WENV170027606
CDTY01038778
236821
Bacteroidota
>WENV170026904
CDTY01011118
52815
Bacteroidota
TAA
Leu
>WENV170027557
CDTY01036158
52815
Bacteroidota
TAA
Leu
>WENV170027913
CDTY01050052
52815
Bacteroidota
TAA
Leu
>WENV170027942
CDTY01051416
271690
Bacteroidota
TTT
Lys
>WENV170027877
CDTY01048787
322169
Bacteroidota
CCA
Trp
>WENV170027232
CDTY01023291
259289
Bacteroidota
CTC
Glu
>WENV170027198
CDTY01022258
261420
Bacteroidota
ACG
Arg
>WENV170027291
CDTY01025459
261420
Bacteroidota
ACG
Arg
>WENV170027482
CDTY01032747
261420
Bacteroidota
ACG
Arg
>WENV170027021
CDTY01015672
259302
Bacteroidota
>WENV170027503
CDTY01033696
259302
Bacteroidota
>WENV170027386
CDTY01029235
261333
Bacteroidota
CCC
Gly
>WENV170027583
CDTY01038288
261333
Bacteroidota
CCC
Gly
>WENV170027093
CDTY01018183
106801
Bacteroidota
CAG
Leu
>WENV170026969
CDTY01013818
24628
Bacteroidota
GGA
Ser
>WENV170026947
CDTY01012881
65114
Bacteroidota
GAG
Leu
>WENV170026950
CDTY01012881
65114
Bacteroidota
GAG
Leu
>WENV170027973
CDTY01052708
65114
Bacteroidota
GAG
Leu
>WENV170027976
CDTY01052708
65114
Bacteroidota
GAG
Leu
>WENV170027165
CDTY01020307
322951
Bacteroidota
TTT
Lys
>WENV170027382
CDTY01028851
71334
Bacteroidota
GAG
Leu
>WENV170027239
CDTY01023691
22799
Bacteroidota
GGA
Ser
>WENV170027601
CDTY01038773
22799
Bacteroidota
GGA
Ser
>WENV170027518
CDTY01034510
259271
Bacteroidota
CTT
Lys
>WENV170027519
CDTY01034510
259271
Bacteroidota
CTT
Lys
>WENV170027520
CDTY01034510
259271
Bacteroidota
CTT
Lys
>WENV170026889
CDTY01010667
371248
Bacteroidota
GTT
Asn
>WENV170027341
CDTY01027918
259223
Bacteroidota
>WENV170027369
CDTY01028783
159953
Bacteroidota
CAT
Met
>WENV170027182
CDTY01021210
20980
Bacteroidota
GGA
Ser
>WENV170026865
CDTY01009807
448605
Bacteroidota
CTG
Gln
>WENV170026782
CDTY01006696
259272
Bacteroidota
CGT
Thr
>WENV170027641
CDTY01040469
449089
Bacteroidota
TTG
Gln
>WENV170027754
CDTY01044084
258386
Bacteroidota
TTT
Lys
>WENV170027600
CDTY01038773
160434
Bacteroidota
GTG
His
>WENV170027816
CDTY01046542
160417
Bacteroidota
GGC
Ala
>WENV170027596
CDTY01038684
166971
Bacteroidota
>WENV170027676
CDTY01041361
166971
Bacteroidota
>WENV170027719
CDTY01042433
259293
Bacteroidota
CCC
Gly
>WENV170027264
CDTY01024581
162591
Bacteroidota
GTG
His
>WENV170027139
CDTY01019438
449090
Bacteroidota
CTG
Gln
>WENV170027140
CDTY01019438
449090
Bacteroidota
CTG
Gln
>WENV170027018
CDTY01015534
307992
Bacteroidota
GAA
Phe
>WENV170027042
CDTY01016866
24259
Bacteroidota
GGA
Ser
>WENV170027559
CDTY01036194
24259
Bacteroidota
GGA
Ser
>WENV170026599
CDTY01000023
58386
Bacteroidota
TGA
Ser
>WENV170026828
CDTY01008473
58386
Bacteroidota
TGA
Ser
>WENV170026875
CDTY01010253
58386
Bacteroidota
TGA
Ser
>WENV170026942
CDTY01012859
58386
Bacteroidota
TGA
Ser
>WENV170026943
CDTY01012859
58386
Bacteroidota
TGA
Ser
>WENV170027057
CDTY01017697
58386
Bacteroidota
TGA
Ser
>WENV170027507
CDTY01034081
58386
Bacteroidota
TGA
Ser
>WENV170027599
CDTY01038773
58386
Bacteroidota
TGA
Ser
>WENV170027948
CDTY01051530
58386
Bacteroidota
TGA
Ser
>WENV170028045
CDTY01054987
58386
Bacteroidota
TGA
Ser
>WENV170027328
CDTY01027836
166972
Bacteroidota
TGT
Thr
>WENV170027890
CDTY01049235
216052
Bacteroidota
TCT
Arg
>WENV170026877
CDTY01010267
139253
Bacteroidota
GGG
Pro
>WENV170026597
CDTY01000016
162594
Bacteroidota
GGC
Ala
>WENV170027289
CDTY01025450
162594
Bacteroidota
GGC
Ala
>WENV170026985
CDTY01014599
414074
Bacteroidota
>WENV170027148
CDTY01019880
414074
Bacteroidota
>WENV170027876
CDTY01048776
414074
Bacteroidota
>WENV170027638
CDTY01040469
261337
Bacteroidota
>WENV170027940
CDTY01051407
293859
Bacteroidota
CCA
Trp
>WENV170027363
CDTY01028363
193541
Bacteroidota
GTT
Asn
>WENV170027364
CDTY01028363
193541
Bacteroidota
GTT
Asn
>WENV170027365
CDTY01028363
193541
Bacteroidota
GTT
Asn
>WENV170027446
CDTY01031474
162617
Bacteroidota
CAT
Met
>WENV170027732
CDTY01043110
258391
Bacteroidota
CTT
Lys
>WENV170026644
CDTY01001813
160459
Bacteroidota
GGC
Ala
>WENV170026751
CDTY01006023
448601
Bacteroidota
TTG
Gln
>WENV170026918
CDTY01012000
448601
Bacteroidota
TTG
Gln
>WENV170027033
CDTY01016370
448601
Bacteroidota
TTG
Gln
>WENV170026887
CDTY01010667
41432
Bacteroidota
TAA
Leu
>WENV170027642
CDTY01040469
371225
Bacteroidota
TTC
Glu
>WENV170026944
CDTY01012859
261432
Bacteroidota
CCA
Trp
>WENV170027006
CDTY01015076
261432
Bacteroidota
CCA
Trp
>WENV170027566
CDTY01037018
377484
Bacteroidota
CCT
Arg
>WENV170027323
CDTY01027388
162516
Bacteroidota
TGC
Ala
>WENV170027854
CDTY01047981
376506
Bacteroidota
GGT
Thr
>WENV170027587
CDTY01038305
18452
Bacteroidota
GGA
Ser
>WENV170027501
CDTY01033681
160435
Bacteroidota
GGC
Ala
>WENV170026891
CDTY01010667
261369
Bacteroidota
GTC
Asp
>WENV170027847
CDTY01047479
371314
Bacteroidota
GCA
Cys
>WENV170026702
CDTY01004046
410456
Bacteroidota
CCC
Gly
>WENV170027085
CDTY01017726
414056
Bacteroidota
GGT
Thr
>WENV170028047
CDTY01054992
105282
Bacteroidota
TAG
Leu
>WENV170027733
CDTY01043147
278748
Bacteroidota
CCC
Gly
>WENV170026697
CDTY01003725
449117
Bacteroidota
TTG
Gln
>WENV170027891
CDTY01049235
261340
Bacteroidota
CTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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