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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
125 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170031071
CDYI01039147
257966
Bacillota
CCA
Trp
>WENV170030413
CDYI01012973
261392
Bacillota
GAA
Phe
>WENV170030415
CDYI01012980
261392
Bacillota
GAA
Phe
>WENV170031361
CDYI01051432
131007
Bacillota
TAG
Leu
>WENV170030833
CDYI01029887
159235
Bacillota
GTC
Asp
>WENV170031294
CDYI01049512
261394
Bacillota
CCG
Arg
>WENV170030915
CDYI01033135
162485
Bacillota
CAT
Met
>WENV170030917
CDYI01033135
162485
Bacillota
CAT
Met
>WENV170031236
CDYI01046786
162485
Bacillota
CAT
Met
>WENV170031238
CDYI01046786
162485
Bacillota
CAT
Met
>WENV170031240
CDYI01046786
162485
Bacillota
CAT
Met
>WENV170030314
CDYI01008242
257968
Bacillota
GCC
Gly
>WENV170030834
CDYI01029887
257968
Bacillota
GCC
Gly
>WENV170030947
CDYI01034584
371229
Bacillota
CTG
Gln
>WENV170031241
CDYI01046786
369774
Bacillota
GGT
Thr
>WENV170031299
CDYI01049962
369809
Bacillota
CTC
Glu
>WENV170031357
CDYI01051432
159079
Bacillota
TCT
Arg
>WENV170030141
CDYI01000487
261354
Bacillota
GGT
Thr
>WENV170031246
CDYI01047143
261354
Bacillota
GGT
Thr
>WENV170030177
CDYI01001936
393129
Bacillota
CTC
Glu
>WENV170030551
CDYI01018235
393129
Bacillota
CTC
Glu
>WENV170031176
CDYI01044383
393129
Bacillota
CTC
Glu
>WENV170030312
CDYI01007904
410090
Bacillota
GCC
Gly
>WENV170031290
CDYI01049176
410090
Bacillota
GCC
Gly
>WENV170031354
CDYI01051403
410090
Bacillota
GCC
Gly
>WENV170030612
CDYI01020917
159242
Bacillota
CCG
Arg
>WENV170031424
CDYI01054462
159242
Bacillota
CCG
Arg
>WENV170031255
CDYI01047258
159076
Bacillota
CAT
Met
>WENV170030640
CDYI01022464
258854
Bacillota
TGC
Ala
>WENV170031544
CDYI01059772
257972
Bacillota
CGG
Pro
>WENV170030772
CDYI01027998
64854
Bacillota
TAA
Leu
>WENV170031441
CDYI01055233
64854
Bacillota
TAA
Leu
>WENV170031126
CDYI01042304
124618
Bacillota
GAG
Leu
>WENV170030968
CDYI01035482
371232
Bacillota
CTC
Glu
>WENV170030386
CDYI01011956
448255
Bacillota
CTG
Gln
>WENV170031543
CDYI01059772
448255
Bacillota
CTG
Gln
>WENV170031425
CDYI01054539
159234
Bacillota
CAC
Val
>WENV170031510
CDYI01058708
159234
Bacillota
CAC
Val
>WENV170030495
CDYI01015901
143511
Bacillota
TGG
Pro
>WENV170030140
CDYI01000476
49778
Bacillota
AAG
Leu
>WENV170031070
CDYI01039139
49778
Bacillota
AAG
Leu
>WENV170030252
CDYI01005944
262083
Bacillota
CCA
Trp
>WENV170030678
CDYI01023850
162688
Bacillota
GAT
Ile
>WENV170031060
CDYI01038673
162688
Bacillota
GAT
Ile
>WENV170031499
CDYI01058505
107867
Bacillota
GTA
Tyr
>WENV170030721
CDYI01025314
162487
Bacillota
CGG
Pro
>WENV170030549
CDYI01018138
161895
Bacillota
GAC
Val
>WENV170031190
CDYI01044846
106802
Bacillota
GTA
Tyr
>WENV170030365
CDYI01009858
159245
Bacillota
GTG
His
>WENV170030364
CDYI01009858
159237
Bacillota
TCT
Arg
>WENV170031041
CDYI01037902
159237
Bacillota
TCT
Arg
>WENV170030740
CDYI01026274
138905
Bacillota
GGG
Pro
>WENV170030680
CDYI01023869
374673
Bacillota
CTC
Glu
>WENV170030811
CDYI01029493
374673
Bacillota
CTC
Glu
>WENV170030221
CDYI01004327
261284
Bacillota
CTT
Lys
>WENV170031122
CDYI01042055
261284
Bacillota
CTT
Lys
>WENV170030191
CDYI01002895
371263
Bacillota
TTG
Gln
>WENV170030829
CDYI01029553
371263
Bacillota
TTG
Gln
>WENV170031127
CDYI01042304
131005
Bacillota
TAG
Leu
>WENV170031034
CDYI01037753
158271
Bacillota
CCT
Arg
>WENV170030506
CDYI01016231
369393
Bacillota
TTC
Glu
>WENV170031168
CDYI01044068
369393
Bacillota
TTC
Glu
>WENV170031520
CDYI01058965
369393
Bacillota
TTC
Glu
>WENV170030242
CDYI01005684
293959
Bacillota
GGC
Ala
>WENV170030273
CDYI01006279
293959
Bacillota
GGC
Ala
>WENV170031105
CDYI01040956
293959
Bacillota
GGC
Ala
>WENV170031143
CDYI01042938
369278
Bacillota
GCA
Cys
>WENV170030602
CDYI01020701
160422
Bacillota
TCT
Arg
>WENV170030420
CDYI01012993
56553
Bacillota
CAG
Leu
>WENV170030421
CDYI01012993
56553
Bacillota
CAG
Leu
>WENV170031051
CDYI01038278
56553
Bacillota
CAG
Leu
>WENV170030647
CDYI01022485
50190
Bacillota
AAG
Leu
>WENV170030648
CDYI01022485
50190
Bacillota
AAG
Leu
>WENV170031259
CDYI01047729
159074
Bacillota
ACG
Arg
>WENV170031232
CDYI01046749
369390
Bacillota
TGT
Thr
>WENV170030887
CDYI01032226
166292
Bacillota
GAT
Ile
>WENV170031485
CDYI01058012
41297
Bacillota
TGA
Ser
>WENV170031249
CDYI01047227
369776
Bacillota
CTG
Gln
>WENV170030557
CDYI01018618
159246
Bacillota
CGC
Ala
>WENV170030306
CDYI01007653
49796
Bacillota
TGA
Ser
>WENV170030706
CDYI01024942
261393
Bacillota
CGT
Thr
>WENV170030972
CDYI01035643
159344
Bacillota
>WENV170030382
CDYI01011620
64820
Bacillota
CAG
Leu
>WENV170030307
CDYI01007653
5393
Bacillota
GCT
Ser
>WENV170030193
CDYI01003124
67413
Bacillota
CAG
Leu
>WENV170030880
CDYI01031684
67413
Bacillota
CAG
Leu
>WENV170030757
CDYI01026969
262428
Bacillota
CGT
Thr
>WENV170030886
CDYI01032226
320672
Bacillota
TGC
Ala
>WENV170030285
CDYI01006889
448256
Bacillota
TTG
Gln
>WENV170030355
CDYI01009698
167205
Bacillota
TAC
Val
>WENV170030149
CDYI01000974
261310
Bacillota
CGT
Thr
>WENV170031192
CDYI01045345
261310
Bacillota
CGT
Thr
>WENV170030367
CDYI01010157
283213
Bacillota
CTT
Lys
>WENV170030765
CDYI01027684
257960
Bacillota
CGC
Ala
>WENV170031457
CDYI01056123
257960
Bacillota
CGC
Ala
>WENV170030817
CDYI01029530
261584
Bacillota
>WENV170030642
CDYI01022471
317016
Bacillota
TTT
Lys
>WENV170030244
CDYI01005829
166295
Bacillota
GTT
Asn
>WENV170030408
CDYI01012973
162489
Bacillota
GTC
Asp
>WENV170030998
CDYI01036664
162489
Bacillota
GTC
Asp
>WENV170031320
CDYI01050380
215069
Bacillota
>WENV170030445
CDYI01014359
159236
Bacillota
GTT
Asn
>WENV170030853
CDYI01030427
159236
Bacillota
GTT
Asn
>WENV170030756
CDYI01026910
257976
Bacillota
CCC
Gly
>WENV170031013
CDYI01037140
257976
Bacillota
CCC
Gly
>WENV170031477
CDYI01057427
257976
Bacillota
CCC
Gly
>WENV170030279
CDYI01006448
276063
Bacillota
CTC
Glu
>WENV170030927
CDYI01033598
162486
Bacillota
GAT
Ile
>WENV170030858
CDYI01030650
258131
Bacillota
TGT
Thr
>WENV170031189
CDYI01044846
258131
Bacillota
TGT
Thr
>WENV170030621
CDYI01021510
71745
Bacillota
TAA
Leu
>WENV170030466
CDYI01014984
89161
Bacillota
CAA
Leu
>WENV170030404
CDYI01012937
369392
Bacillota
GCA
Cys
>WENV170030835
CDYI01029887
369392
Bacillota
GCA
Cys
>WENV170030889
CDYI01032262
390939
Bacillota
CTG
Gln
>WENV170030184
CDYI01002383
288387
Bacillota
GCC
Gly
>WENV170030341
CDYI01009134
257965
Bacillota
TGG
Pro
>WENV170031281
CDYI01048933
257965
Bacillota
TGG
Pro
>WENV170030467
CDYI01015248
64855
Bacillota
CAG
Leu
>WENV170030189
CDYI01002895
162488
Bacillota
TCT
Arg
>WENV170030827
CDYI01029553
162488
Bacillota
TCT
Arg
>WENV170030610
CDYI01020746
159238
Bacillota
GTG
His
>WENV170030235
CDYI01005422
261470
Bacillota
GTT
Asn
>WENV170031172
CDYI01044332
369391
Bacillota
TCC
Gly
>WENV170030928
CDYI01033598
131078
Bacillota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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