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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
165 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170030237
CDYI01005523
449143
Bacteroidota
TTG
Gln
>WENV170031204
CDYI01045867
161400
Bacteroidota
>WENV170030294
CDYI01007303
26247
Bacteroidota
CGA
Ser
>WENV170030969
CDYI01035493
159893
Bacteroidota
TCT
Arg
>WENV170030725
CDYI01025482
65502
Bacteroidota
CAA
Leu
>WENV170031370
CDYI01052263
369487
Bacteroidota
>WENV170030760
CDYI01027280
160436
Bacteroidota
GGC
Ala
>WENV170030892
CDYI01032349
160436
Bacteroidota
GGC
Ala
>WENV170030546
CDYI01017766
300555
Bacteroidota
CCA
Trp
>WENV170030291
CDYI01007056
258780
Bacteroidota
>WENV170031487
CDYI01058036
258780
Bacteroidota
>WENV170030960
CDYI01035024
160416
Bacteroidota
GTG
His
>WENV170030961
CDYI01035024
160416
Bacteroidota
GTG
His
>WENV170030795
CDYI01029051
272161
Bacteroidota
CGT
Thr
>WENV170030800
CDYI01029052
272161
Bacteroidota
CGT
Thr
>WENV170030856
CDYI01030467
65110
Bacteroidota
CAG
Leu
>WENV170030929
CDYI01033623
65110
Bacteroidota
CAG
Leu
>WENV170030854
CDYI01030452
162515
Bacteroidota
GAT
Ile
>WENV170031412
CDYI01053803
261457
Bacteroidota
GCC
Gly
>WENV170030586
CDYI01020528
182139
Bacteroidota
CGG
Pro
>WENV170031462
CDYI01056230
139254
Bacteroidota
GAC
Val
>WENV170030918
CDYI01033142
371242
Bacteroidota
CCT
Arg
>WENV170030361
CDYI01009722
18662
Bacteroidota
GGA
Ser
>WENV170031247
CDYI01047149
18662
Bacteroidota
GGA
Ser
>WENV170030615
CDYI01021119
144955
Bacteroidota
GGG
Pro
>WENV170030767
CDYI01027797
144955
Bacteroidota
GGG
Pro
>WENV170030796
CDYI01029051
144955
Bacteroidota
GGG
Pro
>WENV170030797
CDYI01029052
144955
Bacteroidota
GGG
Pro
>WENV170030822
CDYI01029536
144955
Bacteroidota
GGG
Pro
>WENV170030433
CDYI01013455
259292
Bacteroidota
CGT
Thr
>WENV170031157
CDYI01043458
65111
Bacteroidota
CAA
Leu
>WENV170031158
CDYI01043461
65111
Bacteroidota
CAA
Leu
>WENV170031517
CDYI01058933
65111
Bacteroidota
CAA
Leu
>WENV170031136
CDYI01042524
76307
Bacteroidota
GAG
Leu
>WENV170030332
CDYI01008793
138923
Bacteroidota
TAC
Val
>WENV170030383
CDYI01011624
138923
Bacteroidota
TAC
Val
>WENV170030689
CDYI01024240
138923
Bacteroidota
TAC
Val
>WENV170030690
CDYI01024240
138923
Bacteroidota
TAC
Val
>WENV170030691
CDYI01024240
138923
Bacteroidota
TAC
Val
>WENV170031086
CDYI01039664
162616
Bacteroidota
TGT
Thr
>WENV170031490
CDYI01058456
449113
Bacteroidota
GCA
Cys
>WENV170031302
CDYI01049985
261339
Bacteroidota
CCA
Trp
>WENV170031305
CDYI01049985
105937
Bacteroidota
GTA
Tyr
>WENV170030564
CDYI01018866
50713
Bacteroidota
TGA
Ser
>WENV170031301
CDYI01049985
261338
Bacteroidota
GTT
Asn
>WENV170031065
CDYI01038732
452097
Bacteroidota
CTG
Gln
>WENV170031242
CDYI01046829
452097
Bacteroidota
CTG
Gln
>WENV170031250
CDYI01047229
452097
Bacteroidota
CTG
Gln
>WENV170031348
CDYI01051387
452097
Bacteroidota
CTG
Gln
>WENV170031117
CDYI01041826
374505
Bacteroidota
CTC
Glu
>WENV170030461
CDYI01014914
159918
Bacteroidota
GTG
His
>WENV170031419
CDYI01054268
159918
Bacteroidota
GTG
His
>WENV170030434
CDYI01013477
159413
Bacteroidota
>WENV170030435
CDYI01013477
159413
Bacteroidota
>WENV170031243
CDYI01046852
159413
Bacteroidota
>WENV170031244
CDYI01046852
159413
Bacteroidota
>WENV170031245
CDYI01046852
159413
Bacteroidota
>WENV170030159
CDYI01001613
124700
Bacteroidota
>WENV170030380
CDYI01011617
161250
Bacteroidota
GTT
Asn
>WENV170031366
CDYI01051945
293347
Bacteroidota
CCA
Trp
>WENV170030233
CDYI01005406
205503
Bacteroidota
GTG
His
>WENV170030450
CDYI01014401
370133
Bacteroidota
CCG
Arg
>WENV170030726
CDYI01025536
105470
Bacteroidota
TAG
Leu
>WENV170031124
CDYI01042065
105470
Bacteroidota
TAG
Leu
>WENV170030296
CDYI01007308
52815
Bacteroidota
TAA
Leu
>WENV170030553
CDYI01018237
52815
Bacteroidota
TAA
Leu
>WENV170030592
CDYI01020631
322169
Bacteroidota
CCA
Trp
>WENV170031505
CDYI01058520
259289
Bacteroidota
CTC
Glu
>WENV170030428
CDYI01013005
261333
Bacteroidota
CCC
Gly
>WENV170030150
CDYI01001041
106801
Bacteroidota
CAG
Leu
>WENV170031120
CDYI01041963
322951
Bacteroidota
TTT
Lys
>WENV170031427
CDYI01054737
322951
Bacteroidota
TTT
Lys
>WENV170030930
CDYI01033623
71334
Bacteroidota
GAG
Leu
>WENV170031121
CDYI01042049
71334
Bacteroidota
GAG
Leu
>WENV170030556
CDYI01018547
22799
Bacteroidota
GGA
Ser
>WENV170031208
CDYI01045908
22799
Bacteroidota
GGA
Ser
>WENV170031206
CDYI01045902
259271
Bacteroidota
CTT
Lys
>WENV170030548
CDYI01017839
276085
Bacteroidota
TTT
Lys
>WENV170031532
CDYI01059412
159953
Bacteroidota
CAT
Met
>WENV170031533
CDYI01059412
159953
Bacteroidota
CAT
Met
>WENV170030240
CDYI01005626
20980
Bacteroidota
GGA
Ser
>WENV170030655
CDYI01022944
20980
Bacteroidota
GGA
Ser
>WENV170030624
CDYI01021654
448605
Bacteroidota
CTG
Gln
>WENV170030308
CDYI01007777
259272
Bacteroidota
CGT
Thr
>WENV170031214
CDYI01046267
259272
Bacteroidota
CGT
Thr
>WENV170031309
CDYI01050015
141365
Bacteroidota
GGG
Pro
>WENV170031303
CDYI01049985
449089
Bacteroidota
TTG
Gln
>WENV170031207
CDYI01045902
49945
Bacteroidota
TGA
Ser
>WENV170030142
CDYI01000505
22191
Bacteroidota
GGA
Ser
>WENV170030938
CDYI01034081
160434
Bacteroidota
GTG
His
>WENV170030946
CDYI01034582
160434
Bacteroidota
GTG
His
>WENV170031365
CDYI01051874
160434
Bacteroidota
GTG
His
>WENV170030309
CDYI01007777
160417
Bacteroidota
GGC
Ala
>WENV170030406
CDYI01012960
166971
Bacteroidota
>WENV170030634
CDYI01022064
166971
Bacteroidota
>WENV170031125
CDYI01042098
166971
Bacteroidota
>WENV170030566
CDYI01019121
162591
Bacteroidota
GTG
His
>WENV170031014
CDYI01037175
449090
Bacteroidota
CTG
Gln
>WENV170030388
CDYI01012074
58386
Bacteroidota
TGA
Ser
>WENV170030465
CDYI01014924
58386
Bacteroidota
TGA
Ser
>WENV170030593
CDYI01020692
58386
Bacteroidota
TGA
Ser
>WENV170031064
CDYI01038729
58386
Bacteroidota
TGA
Ser
>WENV170030484
CDYI01015423
26711
Bacteroidota
GCT
Ser
>WENV170030130
CDYI01000030
216052
Bacteroidota
TCT
Arg
>WENV170031518
CDYI01058963
162594
Bacteroidota
GGC
Ala
>WENV170030179
CDYI01001949
90587
Bacteroidota
TAG
Leu
>WENV170030588
CDYI01020591
90587
Bacteroidota
TAG
Leu
>WENV170030153
CDYI01001166
414074
Bacteroidota
>WENV170030441
CDYI01013925
414074
Bacteroidota
>WENV170030525
CDYI01016845
414074
Bacteroidota
>WENV170031104
CDYI01040666
414074
Bacteroidota
>WENV170031300
CDYI01049985
261337
Bacteroidota
>WENV170030166
CDYI01001928
193541
Bacteroidota
GTT
Asn
>WENV170030167
CDYI01001928
193541
Bacteroidota
GTT
Asn
>WENV170030246
CDYI01005941
193541
Bacteroidota
GTT
Asn
>WENV170030247
CDYI01005941
193541
Bacteroidota
GTT
Asn
>WENV170030248
CDYI01005941
193541
Bacteroidota
GTT
Asn
>WENV170030485
CDYI01015506
193541
Bacteroidota
GTT
Asn
>WENV170030486
CDYI01015506
193541
Bacteroidota
GTT
Asn
>WENV170030532
CDYI01017307
193541
Bacteroidota
GTT
Asn
>WENV170030533
CDYI01017307
193541
Bacteroidota
GTT
Asn
>WENV170030561
CDYI01018767
193541
Bacteroidota
GTT
Asn
>WENV170030562
CDYI01018767
193541
Bacteroidota
GTT
Asn
>WENV170030563
CDYI01018767
193541
Bacteroidota
GTT
Asn
>WENV170031381
CDYI01052813
193541
Bacteroidota
GTT
Asn
>WENV170031426
CDYI01054644
193541
Bacteroidota
GTT
Asn
>WENV170031445
CDYI01055315
193541
Bacteroidota
GTT
Asn
>WENV170031446
CDYI01055315
193541
Bacteroidota
GTT
Asn
>WENV170031447
CDYI01055315
193541
Bacteroidota
GTT
Asn
>WENV170030269
CDYI01006091
95591
Bacteroidota
GTA
Tyr
>WENV170030471
CDYI01015391
95591
Bacteroidota
GTA
Tyr
>WENV170030590
CDYI01020631
95591
Bacteroidota
GTA
Tyr
>WENV170030862
CDYI01030909
95591
Bacteroidota
GTA
Tyr
>WENV170030979
CDYI01036020
216682
Bacteroidota
>WENV170031442
CDYI01055253
216682
Bacteroidota
>WENV170031465
CDYI01056545
216682
Bacteroidota
>WENV170030186
CDYI01002514
160459
Bacteroidota
GGC
Ala
>WENV170030591
CDYI01020631
369579
Bacteroidota
GGT
Thr
>WENV170030164
CDYI01001919
160415
Bacteroidota
TCT
Arg
>WENV170030622
CDYI01021639
448601
Bacteroidota
TTG
Gln
>WENV170031418
CDYI01054181
448601
Bacteroidota
TTG
Gln
>WENV170031304
CDYI01049985
371225
Bacteroidota
TTC
Glu
>WENV170030301
CDYI01007338
377484
Bacteroidota
CCT
Arg
>WENV170031097
CDYI01040611
377484
Bacteroidota
CCT
Arg
>WENV170031110
CDYI01041069
377484
Bacteroidota
CCT
Arg
>WENV170030288
CDYI01006939
324834
Bacteroidota
CCC
Gly
>WENV170030855
CDYI01030452
162516
Bacteroidota
TGC
Ala
>WENV170030788
CDYI01028996
113804
Bacteroidota
CAA
Leu
>WENV170030912
CDYI01033130
113804
Bacteroidota
CAA
Leu
>WENV170030489
CDYI01015741
21025
Bacteroidota
GGA
Ser
>WENV170030628
CDYI01022064
92319
Bacteroidota
GTA
Tyr
>WENV170030778
CDYI01028172
18452
Bacteroidota
GGA
Ser
>WENV170031448
CDYI01055368
18452
Bacteroidota
GGA
Ser
>WENV170030780
CDYI01028187
30330
Bacteroidota
CGA
Ser
>WENV170030366
CDYI01009875
160435
Bacteroidota
GGC
Ala
>WENV170031344
CDYI01051387
88754
Bacteroidota
GTA
Tyr
>WENV170031545
CDYI01059845
371314
Bacteroidota
GCA
Cys
>WENV170031044
CDYI01038273
410456
Bacteroidota
CCC
Gly
>WENV170031458
CDYI01056188
410456
Bacteroidota
CCC
Gly
>WENV170030794
CDYI01029051
414056
Bacteroidota
GGT
Thr
>WENV170030799
CDYI01029052
414056
Bacteroidota
GGT
Thr
>WENV170030876
CDYI01031352
105282
Bacteroidota
TAG
Leu
>WENV170031428
CDYI01054757
105282
Bacteroidota
TAG
Leu
>WENV170031474
CDYI01057135
28588
Bacteroidota
GCT
Ser
>WENV170030336
CDYI01009016
261340
Bacteroidota
CTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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