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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170041047
CDYS01059106
50172
Actinomycetota
TGA
Ser
>WENV170040572
CDYS01037156
19409
Actinomycetota
GAG
Leu
>WENV170040442
CDYS01032126
190892
Actinomycetota
CAT
Met
>WENV170040188
CDYS01022200
211952
Actinomycetota
ACG
Arg
>WENV170040187
CDYS01022194
133430
Actinomycetota
TAA
Leu
>WENV170040443
CDYS01032244
238709
Actinomycetota
CAA
Leu
>WENV170040742
CDYS01045200
238709
Actinomycetota
CAA
Leu
>WENV170040719
CDYS01044050
288631
Actinomycetota
CCT
Arg
>WENV170039859
CDYS01006948
161068
Actinomycetota
>WENV170040338
CDYS01028265
158695
Actinomycetota
ACG
Arg
>WENV170040348
CDYS01029153
116981
Actinomycetota
GTA
Tyr
>WENV170040043
CDYS01015230
257872
Actinomycetota
CGT
Thr
>WENV170039721
CDYS01000919
158694
Actinomycetota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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