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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
108 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170040121
CDYS01019247
152201
Bacteroidota
TAC
Val
>WENV170040122
CDYS01019247
152201
Bacteroidota
TAC
Val
>WENV170040123
CDYS01019247
152201
Bacteroidota
TAC
Val
>WENV170040213
CDYS01023293
449143
Bacteroidota
TTG
Gln
>WENV170040051
CDYS01015627
171829
Bacteroidota
CAT
Met
>WENV170040924
CDYS01053462
171829
Bacteroidota
CAT
Met
>WENV170039876
CDYS01008043
159893
Bacteroidota
TCT
Arg
>WENV170040509
CDYS01034346
166871
Bacteroidota
TCT
Arg
>WENV170040581
CDYS01037341
166871
Bacteroidota
TCT
Arg
>WENV170040593
CDYS01037811
369838
Bacteroidota
CCT
Arg
>WENV170040735
CDYS01044407
236813
Bacteroidota
GTC
Asp
>WENV170041005
CDYS01056850
236813
Bacteroidota
GTC
Asp
>WENV170039731
CDYS01001247
286278
Bacteroidota
TTT
Lys
>WENV170039889
CDYS01008517
258780
Bacteroidota
>WENV170040493
CDYS01033843
258780
Bacteroidota
>WENV170040301
CDYS01026196
160416
Bacteroidota
GTG
His
>WENV170040097
CDYS01018404
65110
Bacteroidota
CAG
Leu
>WENV170040713
CDYS01043493
139254
Bacteroidota
GAC
Val
>WENV170040552
CDYS01035751
38349
Bacteroidota
CGA
Ser
>WENV170039955
CDYS01011338
18662
Bacteroidota
GGA
Ser
>WENV170040331
CDYS01027728
259292
Bacteroidota
CGT
Thr
>WENV170040273
CDYS01025203
65111
Bacteroidota
CAA
Leu
>WENV170040211
CDYS01023090
449113
Bacteroidota
GCA
Cys
>WENV170040898
CDYS01051713
138971
Bacteroidota
GGG
Pro
>WENV170039810
CDYS01004589
452097
Bacteroidota
CTG
Gln
>WENV170040248
CDYS01024321
452097
Bacteroidota
CTG
Gln
>WENV170039965
CDYS01011878
154165
Bacteroidota
GGG
Pro
>WENV170040063
CDYS01016503
154165
Bacteroidota
GGG
Pro
>WENV170040092
CDYS01017950
154165
Bacteroidota
GGG
Pro
>WENV170039813
CDYS01004604
159918
Bacteroidota
GTG
His
>WENV170039844
CDYS01006135
161250
Bacteroidota
GTT
Asn
>WENV170039845
CDYS01006135
161250
Bacteroidota
GTT
Asn
>WENV170039846
CDYS01006135
161250
Bacteroidota
GTT
Asn
>WENV170041040
CDYS01058321
161250
Bacteroidota
GTT
Asn
>WENV170041041
CDYS01058321
161250
Bacteroidota
GTT
Asn
>WENV170041042
CDYS01058321
161250
Bacteroidota
GTT
Asn
>WENV170040286
CDYS01025466
153591
Bacteroidota
TGG
Pro
>WENV170041004
CDYS01056850
293347
Bacteroidota
CCA
Trp
>WENV170040410
CDYS01030674
120345
Bacteroidota
TAG
Leu
>WENV170040709
CDYS01043444
120345
Bacteroidota
TAG
Leu
>WENV170039833
CDYS01005953
238847
Bacteroidota
GGC
Ala
>WENV170040900
CDYS01051741
238847
Bacteroidota
GGC
Ala
>WENV170040807
CDYS01048202
205503
Bacteroidota
GTG
His
>WENV170040922
CDYS01053127
370133
Bacteroidota
CCG
Arg
>WENV170039758
CDYS01002681
105470
Bacteroidota
TAG
Leu
>WENV170040359
CDYS01029361
236821
Bacteroidota
>WENV170040559
CDYS01035995
236821
Bacteroidota
>WENV170040219
CDYS01023464
52815
Bacteroidota
TAA
Leu
>WENV170040612
CDYS01039126
322169
Bacteroidota
CCA
Trp
>WENV170040162
CDYS01020775
259289
Bacteroidota
CTC
Glu
>WENV170040124
CDYS01019272
106801
Bacteroidota
CAG
Leu
>WENV170039887
CDYS01008491
24628
Bacteroidota
GGA
Ser
>WENV170040950
CDYS01053999
24628
Bacteroidota
GGA
Ser
>WENV170039843
CDYS01006129
322951
Bacteroidota
TTT
Lys
>WENV170039874
CDYS01008035
71334
Bacteroidota
GAG
Leu
>WENV170039899
CDYS01009020
22799
Bacteroidota
GGA
Ser
>WENV170040961
CDYS01054407
22799
Bacteroidota
GGA
Ser
>WENV170040431
CDYS01031155
259271
Bacteroidota
CTT
Lys
>WENV170040172
CDYS01021590
159953
Bacteroidota
CAT
Met
>WENV170040173
CDYS01021590
159953
Bacteroidota
CAT
Met
>WENV170040268
CDYS01024812
159953
Bacteroidota
CAT
Met
>WENV170040269
CDYS01024812
159953
Bacteroidota
CAT
Met
>WENV170040718
CDYS01043961
20980
Bacteroidota
GGA
Ser
>WENV170040091
CDYS01017950
448605
Bacteroidota
CTG
Gln
>WENV170040098
CDYS01018404
259272
Bacteroidota
CGT
Thr
>WENV170040831
CDYS01049091
141365
Bacteroidota
GGG
Pro
>WENV170040353
CDYS01029185
159415
Bacteroidota
>WENV170039827
CDYS01005316
160434
Bacteroidota
GTG
His
>WENV170040481
CDYS01033335
160417
Bacteroidota
GGC
Ala
>WENV170040465
CDYS01032817
166971
Bacteroidota
>WENV170040867
CDYS01050872
166971
Bacteroidota
>WENV170040500
CDYS01034190
448600
Bacteroidota
CTG
Gln
>WENV170040466
CDYS01032817
162591
Bacteroidota
GTG
His
>WENV170040893
CDYS01051676
449090
Bacteroidota
CTG
Gln
>WENV170040894
CDYS01051676
449090
Bacteroidota
CTG
Gln
>WENV170040895
CDYS01051676
449090
Bacteroidota
CTG
Gln
>WENV170040020
CDYS01014147
307992
Bacteroidota
GAA
Phe
>WENV170040222
CDYS01023775
58386
Bacteroidota
TGA
Ser
>WENV170040840
CDYS01049435
58386
Bacteroidota
TGA
Ser
>WENV170041024
CDYS01057345
58386
Bacteroidota
TGA
Ser
>WENV170041030
CDYS01057816
58386
Bacteroidota
TGA
Ser
>WENV170041032
CDYS01057972
58386
Bacteroidota
TGA
Ser
>WENV170041049
CDYS01059314
58386
Bacteroidota
TGA
Ser
>WENV170040019
CDYS01013922
162594
Bacteroidota
GGC
Ala
>WENV170040260
CDYS01024785
162594
Bacteroidota
GGC
Ala
>WENV170040820
CDYS01048609
162594
Bacteroidota
GGC
Ala
>WENV170039956
CDYS01011384
414074
Bacteroidota
>WENV170040736
CDYS01044434
414074
Bacteroidota
>WENV170040812
CDYS01048217
193541
Bacteroidota
GTT
Asn
>WENV170040813
CDYS01048217
193541
Bacteroidota
GTT
Asn
>WENV170040772
CDYS01046728
162617
Bacteroidota
CAT
Met
>WENV170040109
CDYS01018765
142773
Bacteroidota
TGG
Pro
>WENV170040502
CDYS01034339
258391
Bacteroidota
CTT
Lys
>WENV170039719
CDYS01000684
160459
Bacteroidota
GGC
Ala
>WENV170039826
CDYS01005166
448601
Bacteroidota
TTG
Gln
>WENV170040205
CDYS01022675
448601
Bacteroidota
TTG
Gln
>WENV170041003
CDYS01056850
376506
Bacteroidota
GGT
Thr
>WENV170039716
CDYS01000489
18452
Bacteroidota
GGA
Ser
>WENV170040171
CDYS01021114
160435
Bacteroidota
GGC
Ala
>WENV170040638
CDYS01039736
160435
Bacteroidota
GGC
Ala
>WENV170040163
CDYS01020776
410456
Bacteroidota
CCC
Gly
>WENV170040554
CDYS01035934
410456
Bacteroidota
CCC
Gly
>WENV170039995
CDYS01012852
414056
Bacteroidota
GGT
Thr
>WENV170040076
CDYS01017012
414056
Bacteroidota
GGT
Thr
>WENV170040744
CDYS01045340
414056
Bacteroidota
GGT
Thr
>WENV170040550
CDYS01035638
105282
Bacteroidota
TAG
Leu
>WENV170039768
CDYS01003207
278748
Bacteroidota
CCC
Gly
>WENV170040054
CDYS01016018
261340
Bacteroidota
CTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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