This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170040224
CDYS01023835
9070
Verrucomicrobiota
CGA
Ser
>WENV170040960
CDYS01054406
370537
Verrucomicrobiota
CCG
Arg
>WENV170040047
CDYS01015626
290976
Verrucomicrobiota
GGC
Ala
>WENV170040015
CDYS01013734
88984
Verrucomicrobiota
GTA
Tyr
>WENV170039865
CDYS01007527
88983
Verrucomicrobiota
TAA
Leu
>WENV170040939
CDYS01053531
26467
Verrucomicrobiota
GGA
Ser
>WENV170040599
CDYS01038250
370526
Verrucomicrobiota
CTG
Gln
>WENV170040025
CDYS01014206
50031
Verrucomicrobiota
TGA
Ser
>WENV170040090
CDYS01017916
88985
Verrucomicrobiota
AAG
Leu
>WENV170040048
CDYS01015626
370525
Verrucomicrobiota
TTG
Gln
>WENV170040907
CDYS01052665
65262
Verrucomicrobiota
CAG
Leu
>WENV170040544
CDYS01035604
8029
Verrucomicrobiota
GCT
Ser
>WENV170039799
CDYS01004136
139132
Verrucomicrobiota
GTC
Asp
>WENV170040940
CDYS01053531
139132
Verrucomicrobiota
GTC
Asp
>WENV170039801
CDYS01004149
370538
Verrucomicrobiota
CGT
Thr
>WENV170040089
CDYS01017916
260061
Verrucomicrobiota
>WENV170040326
CDYS01027387
388804
Verrucomicrobiota
TAC
Val
>WENV170040661
CDYS01041543
161141
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK