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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
205 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170042157
CDYU01000002
448601
Bacteroidota
TTG
Gln
>WENV170042172
CDYU01000402
294337
Bacteroidota
CCC
Gly
>WENV170042187
CDYU01000531
261333
Bacteroidota
CCC
Gly
>WENV170042188
CDYU01000532
160434
Bacteroidota
GTG
His
>WENV170042190
CDYU01000543
105701
Bacteroidota
TAG
Leu
>WENV170042197
CDYU01000700
160459
Bacteroidota
GGC
Ala
>WENV170042206
CDYU01001038
286278
Bacteroidota
TTT
Lys
>WENV170042215
CDYU01001538
261335
Bacteroidota
TTT
Lys
>WENV170042242
CDYU01002856
139254
Bacteroidota
GAC
Val
>WENV170042255
CDYU01003369
160459
Bacteroidota
GGC
Ala
>WENV170042258
CDYU01003372
452097
Bacteroidota
CTG
Gln
>WENV170042266
CDYU01003381
141365
Bacteroidota
GGG
Pro
>WENV170042274
CDYU01003389
160417
Bacteroidota
GGC
Ala
>WENV170042289
CDYU01003887
378278
Bacteroidota
CCT
Arg
>WENV170042290
CDYU01003887
166971
Bacteroidota
>WENV170042286
CDYU01003887
92319
Bacteroidota
GTA
Tyr
>WENV170042291
CDYU01003888
144955
Bacteroidota
GGG
Pro
>WENV170042292
CDYU01003905
159893
Bacteroidota
TCT
Arg
>WENV170042307
CDYU01004345
161400
Bacteroidota
>WENV170042320
CDYU01004808
18662
Bacteroidota
GGA
Ser
>WENV170042350
CDYU01005702
142773
Bacteroidota
TGG
Pro
>WENV170042362
CDYU01006171
159893
Bacteroidota
TCT
Arg
>WENV170042365
CDYU01006174
161250
Bacteroidota
GTT
Asn
>WENV170042366
CDYU01006174
161250
Bacteroidota
GTT
Asn
>WENV170042367
CDYU01006174
161250
Bacteroidota
GTT
Asn
>WENV170042369
CDYU01006180
160417
Bacteroidota
GGC
Ala
>WENV170042380
CDYU01006250
124700
Bacteroidota
>WENV170042383
CDYU01006250
124700
Bacteroidota
>WENV170042381
CDYU01006250
65114
Bacteroidota
GAG
Leu
>WENV170042400
CDYU01006627
448600
Bacteroidota
CTG
Gln
>WENV170042401
CDYU01006627
448600
Bacteroidota
CTG
Gln
>WENV170042409
CDYU01006837
259289
Bacteroidota
CTC
Glu
>WENV170042419
CDYU01007068
139253
Bacteroidota
GGG
Pro
>WENV170042427
CDYU01007100
162517
Bacteroidota
GTT
Asn
>WENV170042434
CDYU01007537
278748
Bacteroidota
CCC
Gly
>WENV170042440
CDYU01007865
26362
Bacteroidota
GCT
Ser
>WENV170042441
CDYU01007865
374505
Bacteroidota
CTC
Glu
>WENV170042467
CDYU01008440
261333
Bacteroidota
CCC
Gly
>WENV170042470
CDYU01008452
160416
Bacteroidota
GTG
His
>WENV170042471
CDYU01008455
144955
Bacteroidota
GGG
Pro
>WENV170042474
CDYU01008880
124700
Bacteroidota
>WENV170042477
CDYU01008880
124700
Bacteroidota
>WENV170042480
CDYU01008880
124700
Bacteroidota
>WENV170042475
CDYU01008880
65114
Bacteroidota
GAG
Leu
>WENV170042478
CDYU01008880
65114
Bacteroidota
GAG
Leu
>WENV170042495
CDYU01009337
449098
Bacteroidota
>WENV170042496
CDYU01009337
261369
Bacteroidota
GTC
Asp
>WENV170042525
CDYU01010210
371314
Bacteroidota
GCA
Cys
>WENV170042534
CDYU01010737
65111
Bacteroidota
CAA
Leu
>WENV170042540
CDYU01010786
286278
Bacteroidota
TTT
Lys
>WENV170042572
CDYU01012032
21025
Bacteroidota
GGA
Ser
>WENV170042594
CDYU01012516
188752
Bacteroidota
TCT
Arg
>WENV170042597
CDYU01012561
65110
Bacteroidota
CAG
Leu
>WENV170042596
CDYU01012561
18452
Bacteroidota
GGA
Ser
>WENV170042621
CDYU01012994
54039
Bacteroidota
TGA
Ser
>WENV170042636
CDYU01013408
171829
Bacteroidota
CAT
Met
>WENV170042673
CDYU01014313
193541
Bacteroidota
GTT
Asn
>WENV170042674
CDYU01014313
193541
Bacteroidota
GTT
Asn
>WENV170042687
CDYU01014787
448605
Bacteroidota
CTG
Gln
>WENV170042688
CDYU01014795
54039
Bacteroidota
TGA
Ser
>WENV170042699
CDYU01015109
54039
Bacteroidota
TGA
Ser
>WENV170042701
CDYU01015242
259272
Bacteroidota
CGT
Thr
>WENV170042736
CDYU01016204
54039
Bacteroidota
TGA
Ser
>WENV170042746
CDYU01016220
159953
Bacteroidota
CAT
Met
>WENV170042754
CDYU01016354
371242
Bacteroidota
CCT
Arg
>WENV170042763
CDYU01016675
182139
Bacteroidota
CGG
Pro
>WENV170042766
CDYU01017114
54039
Bacteroidota
TGA
Ser
>WENV170042768
CDYU01017138
65110
Bacteroidota
CAG
Leu
>WENV170042769
CDYU01017138
259272
Bacteroidota
CGT
Thr
>WENV170042770
CDYU01017138
18452
Bacteroidota
GGA
Ser
>WENV170042771
CDYU01017142
166467
Bacteroidota
>WENV170042777
CDYU01017144
369838
Bacteroidota
CCT
Arg
>WENV170042776
CDYU01017144
159415
Bacteroidota
>WENV170042774
CDYU01017144
193541
Bacteroidota
GTT
Asn
>WENV170042775
CDYU01017144
193541
Bacteroidota
GTT
Asn
>WENV170042813
CDYU01017965
52815
Bacteroidota
TAA
Leu
>WENV170042816
CDYU01017968
171829
Bacteroidota
CAT
Met
>WENV170042821
CDYU01017986
193541
Bacteroidota
GTT
Asn
>WENV170042822
CDYU01017986
193541
Bacteroidota
GTT
Asn
>WENV170042851
CDYU01018782
106801
Bacteroidota
CAG
Leu
>WENV170042856
CDYU01018955
144955
Bacteroidota
GGG
Pro
>WENV170042863
CDYU01019233
105282
Bacteroidota
TAG
Leu
>WENV170042864
CDYU01019333
89183
Bacteroidota
GTA
Tyr
>WENV170042879
CDYU01019698
258386
Bacteroidota
TTT
Lys
>WENV170042882
CDYU01019915
65517
Bacteroidota
CAG
Leu
>WENV170042881
CDYU01019915
449117
Bacteroidota
TTG
Gln
>WENV170042884
CDYU01019998
20980
Bacteroidota
GGA
Ser
>WENV170042909
CDYU01021130
138971
Bacteroidota
GGG
Pro
>WENV170042913
CDYU01021132
144955
Bacteroidota
GGG
Pro
>WENV170042915
CDYU01021147
162594
Bacteroidota
GGC
Ala
>WENV170042938
CDYU01021898
160417
Bacteroidota
GGC
Ala
>WENV170042942
CDYU01022117
26362
Bacteroidota
GCT
Ser
>WENV170042959
CDYU01022695
162521
Bacteroidota
GGC
Ala
>WENV170042968
CDYU01023060
160435
Bacteroidota
GGC
Ala
>WENV170042986
CDYU01023510
54039
Bacteroidota
TGA
Ser
>WENV170042988
CDYU01023512
54039
Bacteroidota
TGA
Ser
>WENV170042994
CDYU01023672
20913
Bacteroidota
GGA
Ser
>WENV170042995
CDYU01023684
261420
Bacteroidota
ACG
Arg
>WENV170042999
CDYU01023899
20913
Bacteroidota
GGA
Ser
>WENV170043002
CDYU01023940
65502
Bacteroidota
CAA
Leu
>WENV170043024
CDYU01024880
193541
Bacteroidota
GTT
Asn
>WENV170043025
CDYU01024880
193541
Bacteroidota
GTT
Asn
>WENV170043026
CDYU01024882
369838
Bacteroidota
CCT
Arg
>WENV170043027
CDYU01024882
159415
Bacteroidota
>WENV170043030
CDYU01024884
65115
Bacteroidota
GAG
Leu
>WENV170043042
CDYU01025364
285851
Bacteroidota
GCC
Gly
>WENV170043056
CDYU01025884
258386
Bacteroidota
TTT
Lys
>WENV170043057
CDYU01025901
144955
Bacteroidota
GGG
Pro
>WENV170043068
CDYU01026309
261340
Bacteroidota
CTC
Glu
>WENV170043080
CDYU01026810
258780
Bacteroidota
>WENV170043089
CDYU01027166
162591
Bacteroidota
GTG
His
>WENV170043099
CDYU01027285
285851
Bacteroidota
GCC
Gly
>WENV170043104
CDYU01027672
21025
Bacteroidota
GGA
Ser
>WENV170043109
CDYU01028072
193541
Bacteroidota
GTT
Asn
>WENV170043110
CDYU01028072
193541
Bacteroidota
GTT
Asn
>WENV170043111
CDYU01028072
193541
Bacteroidota
GTT
Asn
>WENV170043136
CDYU01029047
193541
Bacteroidota
GTT
Asn
>WENV170043142
CDYU01029064
452097
Bacteroidota
CTG
Gln
>WENV170043143
CDYU01029066
369581
Bacteroidota
>WENV170043144
CDYU01029066
369581
Bacteroidota
>WENV170043182
CDYU01030343
162617
Bacteroidota
CAT
Met
>WENV170043186
CDYU01030357
272161
Bacteroidota
CGT
Thr
>WENV170043197
CDYU01030973
371247
Bacteroidota
TTC
Glu
>WENV170043218
CDYU01031641
162594
Bacteroidota
GGC
Ala
>WENV170043229
CDYU01032468
138971
Bacteroidota
GGG
Pro
>WENV170043247
CDYU01032882
90587
Bacteroidota
TAG
Leu
>WENV170043262
CDYU01033380
261335
Bacteroidota
TTT
Lys
>WENV170043271
CDYU01033717
452097
Bacteroidota
CTG
Gln
>WENV170043301
CDYU01034570
370133
Bacteroidota
CCG
Arg
>WENV170043309
CDYU01034734
369838
Bacteroidota
CCT
Arg
>WENV170043325
CDYU01035219
160459
Bacteroidota
GGC
Ala
>WENV170043328
CDYU01035631
448601
Bacteroidota
TTG
Gln
>WENV170043338
CDYU01035650
105282
Bacteroidota
TAG
Leu
>WENV170043373
CDYU01036521
166971
Bacteroidota
>WENV170043374
CDYU01036521
162591
Bacteroidota
GTG
His
>WENV170043369
CDYU01036521
88754
Bacteroidota
GTA
Tyr
>WENV170043387
CDYU01037030
26362
Bacteroidota
GCT
Ser
>WENV170043388
CDYU01037030
374505
Bacteroidota
CTC
Glu
>WENV170043406
CDYU01037448
160416
Bacteroidota
GTG
His
>WENV170043407
CDYU01037448
160416
Bacteroidota
GTG
His
>WENV170043408
CDYU01037451
285851
Bacteroidota
GCC
Gly
>WENV170043419
CDYU01037867
18452
Bacteroidota
GGA
Ser
>WENV170043425
CDYU01038182
278748
Bacteroidota
CCC
Gly
>WENV170043430
CDYU01038309
166871
Bacteroidota
TCT
Arg
>WENV170043431
CDYU01038310
138923
Bacteroidota
TAC
Val
>WENV170043432
CDYU01038310
138923
Bacteroidota
TAC
Val
>WENV170043439
CDYU01038737
171829
Bacteroidota
CAT
Met
>WENV170043440
CDYU01038737
138971
Bacteroidota
GGG
Pro
>WENV170043443
CDYU01038745
54039
Bacteroidota
TGA
Ser
>WENV170043469
CDYU01039240
54039
Bacteroidota
TGA
Ser
>WENV170043496
CDYU01039841
193541
Bacteroidota
GTT
Asn
>WENV170043497
CDYU01039841
193541
Bacteroidota
GTT
Asn
>WENV170043498
CDYU01039841
193541
Bacteroidota
GTT
Asn
>WENV170043499
CDYU01039841
193541
Bacteroidota
GTT
Asn
>WENV170043501
CDYU01040134
160436
Bacteroidota
GGC
Ala
>WENV170043508
CDYU01040150
369581
Bacteroidota
>WENV170043507
CDYU01040150
142773
Bacteroidota
TGG
Pro
>WENV170043510
CDYU01040151
160415
Bacteroidota
TCT
Arg
>WENV170043519
CDYU01040167
452097
Bacteroidota
CTG
Gln
>WENV170043588
CDYU01041734
159589
Bacteroidota
>WENV170043590
CDYU01041970
369581
Bacteroidota
>WENV170043597
CDYU01042430
162594
Bacteroidota
GGC
Ala
>WENV170043624
CDYU01043289
159893
Bacteroidota
TCT
Arg
>WENV170043634
CDYU01044091
30330
Bacteroidota
CGA
Ser
>WENV170043642
CDYU01044105
89183
Bacteroidota
GTA
Tyr
>WENV170043674
CDYU01045508
259292
Bacteroidota
CGT
Thr
>WENV170043675
CDYU01045522
54117
Bacteroidota
TGA
Ser
>WENV170043676
CDYU01045522
259271
Bacteroidota
CTT
Lys
>WENV170043678
CDYU01045522
49945
Bacteroidota
TGA
Ser
>WENV170043677
CDYU01045522
288732
Bacteroidota
CTT
Lys
>WENV170043682
CDYU01045530
453376
Bacteroidota
CTG
Gln
>WENV170043708
CDYU01046238
26705
Bacteroidota
GCT
Ser
>WENV170043710
CDYU01046295
369579
Bacteroidota
GGT
Thr
>WENV170043709
CDYU01046295
89183
Bacteroidota
GTA
Tyr
>WENV170043711
CDYU01046325
159415
Bacteroidota
>WENV170043716
CDYU01046353
171829
Bacteroidota
CAT
Met
>WENV170043721
CDYU01046799
371246
Bacteroidota
CCT
Arg
>WENV170043754
CDYU01047311
166871
Bacteroidota
TCT
Arg
>WENV170043770
CDYU01048005
261420
Bacteroidota
ACG
Arg
>WENV170043781
CDYU01048214
18452
Bacteroidota
GGA
Ser
>WENV170043789
CDYU01048505
54039
Bacteroidota
TGA
Ser
>WENV170043794
CDYU01048674
105470
Bacteroidota
TAG
Leu
>WENV170043809
CDYU01049614
258780
Bacteroidota
>WENV170043827
CDYU01050047
166971
Bacteroidota
>WENV170043824
CDYU01050047
88754
Bacteroidota
GTA
Tyr
>WENV170043830
CDYU01050067
449113
Bacteroidota
GCA
Cys
>WENV170043841
CDYU01050633
142668
Bacteroidota
TAC
Val
>WENV170043875
CDYU01051837
89183
Bacteroidota
GTA
Tyr
>WENV170043905
CDYU01052321
448691
Bacteroidota
TTG
Gln
>WENV170043928
CDYU01052821
258391
Bacteroidota
CTT
Lys
>WENV170043925
CDYU01052821
142668
Bacteroidota
TAC
Val
>WENV170043926
CDYU01052821
142668
Bacteroidota
TAC
Val
>WENV170043957
CDYU01053724
293347
Bacteroidota
CCA
Trp
>WENV170043956
CDYU01053724
376506
Bacteroidota
GGT
Thr
>WENV170043967
CDYU01053871
449116
Bacteroidota
CTG
Gln
>WENV170044011
CDYU01055104
285851
Bacteroidota
GCC
Gly
>WENV170044013
CDYU01055119
89183
Bacteroidota
GTA
Tyr
>WENV170044025
CDYU01055618
160435
Bacteroidota
GGC
Ala
>WENV170044026
CDYU01055634
370133
Bacteroidota
CCG
Arg
>WENV170044029
CDYU01056039
159918
Bacteroidota
GTG
His
>WENV170044061
CDYU01056982
193541
Bacteroidota
GTT
Asn
>WENV170044065
CDYU01057013
193541
Bacteroidota
GTT
Asn
>WENV170044066
CDYU01057013
193541
Bacteroidota
GTT
Asn
>WENV170044090
CDYU01057617
370665
Bacteroidota
CCG
Arg
>WENV170044107
CDYU01057971
160416
Bacteroidota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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