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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170044766
CDYX01017957
50172
Actinomycetota
TGA
Ser
>WENV170044626
CDYX01013541
19409
Actinomycetota
GAG
Leu
>WENV170045474
CDYX01039677
190892
Actinomycetota
CAT
Met
>WENV170045500
CDYX01040330
105930
Actinomycetota
TAA
Leu
>WENV170044888
CDYX01023077
105929
Actinomycetota
GTA
Tyr
>WENV170044645
CDYX01014163
293317
Actinomycetota
GGC
Ala
>WENV170044512
CDYX01009739
162410
Actinomycetota
TCT
Arg
>WENV170044364
CDYX01005951
261299
Actinomycetota
GCC
Gly
>WENV170045115
CDYX01029737
322268
Actinomycetota
CGT
Thr
>WENV170044564
CDYX01011489
261298
Actinomycetota
CGT
Thr
>WENV170045288
CDYX01034287
261298
Actinomycetota
CGT
Thr
>WENV170045466
CDYX01039329
139249
Actinomycetota
GTC
Asp
>WENV170044559
CDYX01010768
58412
Actinomycetota
CGA
Ser
>WENV170044596
CDYX01012778
58412
Actinomycetota
CGA
Ser
>WENV170044631
CDYX01013541
261336
Actinomycetota
GTT
Asn
>WENV170044767
CDYX01017957
369047
Actinomycetota
TTC
Glu
>WENV170044444
CDYX01007842
162417
Actinomycetota
CGG
Pro
>WENV170044505
CDYX01009121
371217
Actinomycetota
CAC
Val
>WENV170044757
CDYX01017957
469498
Actinomycetota
CCC
Gly
>WENV170045614
CDYX01043479
18633
Actinomycetota
CGA
Ser
>WENV170044371
CDYX01006163
133430
Actinomycetota
TAA
Leu
>WENV170045433
CDYX01038471
162411
Actinomycetota
CCG
Arg
>WENV170044628
CDYX01013541
238709
Actinomycetota
CAA
Leu
>WENV170045138
CDYX01029944
238709
Actinomycetota
CAA
Leu
>WENV170045193
CDYX01031614
159159
Actinomycetota
TGG
Pro
>WENV170044818
CDYX01019544
371214
Actinomycetota
GTT
Asn
>WENV170044978
CDYX01026285
162414
Actinomycetota
GAT
Ile
>WENV170044980
CDYX01026285
162414
Actinomycetota
GAT
Ile
>WENV170044825
CDYX01020075
288631
Actinomycetota
CCT
Arg
>WENV170045047
CDYX01027312
288631
Actinomycetota
CCT
Arg
>WENV170044747
CDYX01017957
161068
Actinomycetota
>WENV170044768
CDYX01017957
161068
Actinomycetota
>WENV170045346
CDYX01035712
26694
Actinomycetota
TGA
Ser
>WENV170044620
CDYX01013541
328213
Actinomycetota
GTT
Asn
>WENV170044630
CDYX01013541
328213
Actinomycetota
GTT
Asn
>WENV170045592
CDYX01042867
218329
Actinomycetota
CTT
Lys
>WENV170045613
CDYX01043479
18632
Actinomycetota
GGA
Ser
>WENV170044889
CDYX01023077
261300
Actinomycetota
GGT
Thr
>WENV170045626
CDYX01043768
261300
Actinomycetota
GGT
Thr
>WENV170044752
CDYX01017957
102952
Actinomycetota
CAG
Leu
>WENV170044928
CDYX01024499
158695
Actinomycetota
ACG
Arg
>WENV170044929
CDYX01024499
158695
Actinomycetota
ACG
Arg
>WENV170045467
CDYX01039441
158695
Actinomycetota
ACG
Arg
>WENV170045468
CDYX01039441
158695
Actinomycetota
ACG
Arg
>WENV170045469
CDYX01039441
158695
Actinomycetota
ACG
Arg
>WENV170044899
CDYX01023479
162416
Actinomycetota
GTG
His
>WENV170045333
CDYX01035259
449079
Actinomycetota
CTG
Gln
>WENV170044717
CDYX01016909
448231
Actinomycetota
CCC
Gly
>WENV170045136
CDYX01029914
162413
Actinomycetota
TTC
Glu
>WENV170045281
CDYX01034096
261307
Actinomycetota
TAC
Val
>WENV170044219
CDYX01003051
183611
Actinomycetota
GGG
Pro
>WENV170044764
CDYX01017957
116981
Actinomycetota
GTA
Tyr
>WENV170045117
CDYX01029737
257872
Actinomycetota
CGT
Thr
>WENV170044594
CDYX01012731
65500
Actinomycetota
CAA
Leu
>WENV170044765
CDYX01017957
158694
Actinomycetota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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