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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
119 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170044527
CDYX01010049
257969
Bacillota
TAC
Val
>WENV170044513
CDYX01009742
261392
Bacillota
GAA
Phe
>WENV170044868
CDYX01021967
453866
Bacillota
GCA
Cys
>WENV170044496
CDYX01009113
371877
Bacillota
CTG
Gln
>WENV170044278
CDYX01004397
65505
Bacillota
TAA
Leu
>WENV170045099
CDYX01029089
65505
Bacillota
TAA
Leu
>WENV170045212
CDYX01032038
261394
Bacillota
CCG
Arg
>WENV170044386
CDYX01006515
261391
Bacillota
GTT
Asn
>WENV170045023
CDYX01026926
261391
Bacillota
GTT
Asn
>WENV170044145
CDYX01000964
162485
Bacillota
CAT
Met
>WENV170044376
CDYX01006445
162485
Bacillota
CAT
Met
>WENV170045251
CDYX01033305
162485
Bacillota
CAT
Met
>WENV170044205
CDYX01002435
261452
Bacillota
GCC
Gly
>WENV170044725
CDYX01017264
261452
Bacillota
GCC
Gly
>WENV170044212
CDYX01002732
257968
Bacillota
GCC
Gly
>WENV170044425
CDYX01007692
257968
Bacillota
GCC
Gly
>WENV170044526
CDYX01010049
257968
Bacillota
GCC
Gly
>WENV170045086
CDYX01028716
257968
Bacillota
GCC
Gly
>WENV170045554
CDYX01041549
257968
Bacillota
GCC
Gly
>WENV170044129
CDYX01000251
162480
Bacillota
ACG
Arg
>WENV170044186
CDYX01002021
88717
Bacillota
GTA
Tyr
>WENV170045404
CDYX01037751
369774
Bacillota
GGT
Thr
>WENV170044707
CDYX01016432
269920
Bacillota
CGC
Ala
>WENV170045277
CDYX01033791
269920
Bacillota
CGC
Ala
>WENV170044424
CDYX01007692
257970
Bacillota
GAA
Phe
>WENV170045085
CDYX01028716
257970
Bacillota
GAA
Phe
>WENV170045553
CDYX01041549
257970
Bacillota
GAA
Phe
>WENV170044144
CDYX01000922
257963
Bacillota
>WENV170044829
CDYX01020291
257963
Bacillota
>WENV170044362
CDYX01005833
393129
Bacillota
CTC
Glu
>WENV170044739
CDYX01017853
393129
Bacillota
CTC
Glu
>WENV170044821
CDYX01019793
393129
Bacillota
CTC
Glu
>WENV170044835
CDYX01020609
393129
Bacillota
CTC
Glu
>WENV170044887
CDYX01023056
393129
Bacillota
CTC
Glu
>WENV170044983
CDYX01026308
393129
Bacillota
CTC
Glu
>WENV170045498
CDYX01040304
393129
Bacillota
CTC
Glu
>WENV170044521
CDYX01009774
392172
Bacillota
TTC
Glu
>WENV170044854
CDYX01021391
392172
Bacillota
TTC
Glu
>WENV170044158
CDYX01001345
159242
Bacillota
CCG
Arg
>WENV170044523
CDYX01009871
159242
Bacillota
CCG
Arg
>WENV170044789
CDYX01018492
131004
Bacillota
TAG
Leu
>WENV170044667
CDYX01014632
161902
Bacillota
CAT
Met
>WENV170044790
CDYX01018492
124618
Bacillota
GAG
Leu
>WENV170044249
CDYX01003945
449103
Bacillota
GCA
Cys
>WENV170044460
CDYX01008361
449103
Bacillota
GCA
Cys
>WENV170045624
CDYX01043564
448255
Bacillota
CTG
Gln
>WENV170044961
CDYX01025885
159234
Bacillota
CAC
Val
>WENV170044141
CDYX01000602
272758
Bacillota
GCC
Gly
>WENV170044575
CDYX01011796
269973
Bacillota
CCA
Trp
>WENV170044163
CDYX01001377
162688
Bacillota
GAT
Ile
>WENV170044593
CDYX01012723
162688
Bacillota
GAT
Ile
>WENV170044221
CDYX01003282
162487
Bacillota
CGG
Pro
>WENV170045380
CDYX01037396
162487
Bacillota
CGG
Pro
>WENV170044420
CDYX01007638
133221
Bacillota
CAA
Leu
>WENV170044895
CDYX01023116
106802
Bacillota
GTA
Tyr
>WENV170044686
CDYX01015338
159245
Bacillota
GTG
His
>WENV170044685
CDYX01015338
159237
Bacillota
TCT
Arg
>WENV170044772
CDYX01018237
261284
Bacillota
CTT
Lys
>WENV170044938
CDYX01024816
261284
Bacillota
CTT
Lys
>WENV170045476
CDYX01039679
261284
Bacillota
CTT
Lys
>WENV170045264
CDYX01033668
371263
Bacillota
TTG
Gln
>WENV170045519
CDYX01040414
158271
Bacillota
CCT
Arg
>WENV170044532
CDYX01010125
369393
Bacillota
TTC
Glu
>WENV170044893
CDYX01023084
369393
Bacillota
TTC
Glu
>WENV170045166
CDYX01030684
293959
Bacillota
GGC
Ala
>WENV170044898
CDYX01023468
41269
Bacillota
TGA
Ser
>WENV170044190
CDYX01002083
56553
Bacillota
CAG
Leu
>WENV170044191
CDYX01002083
56553
Bacillota
CAG
Leu
>WENV170045422
CDYX01038126
50190
Bacillota
AAG
Leu
>WENV170045423
CDYX01038126
50190
Bacillota
AAG
Leu
>WENV170045113
CDYX01029449
166292
Bacillota
GAT
Ile
>WENV170045170
CDYX01030912
166292
Bacillota
GAT
Ile
>WENV170044867
CDYX01021786
370126
Bacillota
CTC
Glu
>WENV170045100
CDYX01029089
261358
Bacillota
GAA
Phe
>WENV170045150
CDYX01030480
261358
Bacillota
GAA
Phe
>WENV170045087
CDYX01028717
369776
Bacillota
CTG
Gln
>WENV170045101
CDYX01029092
369776
Bacillota
CTG
Gln
>WENV170045367
CDYX01036951
159246
Bacillota
CGC
Ala
>WENV170045292
CDYX01034432
49796
Bacillota
TGA
Ser
>WENV170044137
CDYX01000581
261393
Bacillota
CGT
Thr
>WENV170044995
CDYX01026571
261393
Bacillota
CGT
Thr
>WENV170045483
CDYX01039972
450457
Bacillota
CTG
Gln
>WENV170045293
CDYX01034432
5393
Bacillota
GCT
Ser
>WENV170044281
CDYX01004685
162605
Bacillota
CCT
Arg
>WENV170044171
CDYX01001382
67413
Bacillota
CAG
Leu
>WENV170044534
CDYX01010401
67413
Bacillota
CAG
Leu
>WENV170045018
CDYX01026925
67413
Bacillota
CAG
Leu
>WENV170045536
CDYX01040927
67413
Bacillota
CAG
Leu
>WENV170045112
CDYX01029449
320672
Bacillota
TGC
Ala
>WENV170045169
CDYX01030912
320672
Bacillota
TGC
Ala
>WENV170044974
CDYX01026051
167205
Bacillota
TAC
Val
>WENV170045270
CDYX01033791
167205
Bacillota
TAC
Val
>WENV170044501
CDYX01009113
296620
Bacillota
GAA
Phe
>WENV170045062
CDYX01027900
257960
Bacillota
CGC
Ala
>WENV170044419
CDYX01007630
166295
Bacillota
GTT
Asn
>WENV170044842
CDYX01020743
166295
Bacillota
GTT
Asn
>WENV170045525
CDYX01040657
162489
Bacillota
GTC
Asp
>WENV170044834
CDYX01020577
159236
Bacillota
GTT
Asn
>WENV170044870
CDYX01022071
159236
Bacillota
GTT
Asn
>WENV170044952
CDYX01025522
159236
Bacillota
GTT
Asn
>WENV170044696
CDYX01015800
257976
Bacillota
CCC
Gly
>WENV170045247
CDYX01033128
257976
Bacillota
CCC
Gly
>WENV170044326
CDYX01005136
276063
Bacillota
CTC
Glu
>WENV170045552
CDYX01041404
375901
Bacillota
CCG
Arg
>WENV170044417
CDYX01007439
258131
Bacillota
TGT
Thr
>WENV170044664
CDYX01014632
258131
Bacillota
TGT
Thr
>WENV170045473
CDYX01039650
89161
Bacillota
CAA
Leu
>WENV170045262
CDYX01033668
162488
Bacillota
TCT
Arg
>WENV170044574
CDYX01011796
105955
Bacillota
TAG
Leu
>WENV170044558
CDYX01010762
261470
Bacillota
GTT
Asn
>WENV170044175
CDYX01001693
369391
Bacillota
TCC
Gly
>WENV170044169
CDYX01001377
222762
Bacillota
GTC
Asp
>WENV170044286
CDYX01004739
222762
Bacillota
GTC
Asp
>WENV170044723
CDYX01017264
222762
Bacillota
GTC
Asp
>WENV170045271
CDYX01033791
222762
Bacillota
GTC
Asp
>WENV170045557
CDYX01041606
222762
Bacillota
GTC
Asp
>WENV170044150
CDYX01001007
131078
Bacillota
TAG
Leu
>WENV170044438
CDYX01007762
131078
Bacillota
TAG
Leu
>WENV170045405
CDYX01037813
131078
Bacillota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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