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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
66 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170049884
CDZB01005838
283277
Bacillota
GTT
Asn
>WENV170051235
CDZB01060785
270088
Bacillota
CGT
Thr
>WENV170051290
CDZB01062848
387058
Bacillota
CCT
Arg
>WENV170049902
CDZB01005904
261394
Bacillota
CCG
Arg
>WENV170050371
CDZB01024035
261391
Bacillota
GTT
Asn
>WENV170050437
CDZB01026662
261391
Bacillota
GTT
Asn
>WENV170050069
CDZB01013237
162480
Bacillota
ACG
Arg
>WENV170051055
CDZB01053547
70198
Bacillota
CAA
Leu
>WENV170050318
CDZB01022128
369809
Bacillota
CTC
Glu
>WENV170051660
CDZB01077161
369809
Bacillota
CTC
Glu
>WENV170051027
CDZB01052236
269920
Bacillota
CGC
Ala
>WENV170049999
CDZB01010478
258854
Bacillota
TGC
Ala
>WENV170050140
CDZB01015683
162469
Bacillota
GTC
Asp
>WENV170050844
CDZB01045566
286917
Bacillota
TGC
Ala
>WENV170050817
CDZB01043907
143511
Bacillota
TGG
Pro
>WENV170050263
CDZB01020812
49778
Bacillota
AAG
Leu
>WENV170051508
CDZB01071451
272758
Bacillota
GCC
Gly
>WENV170049788
CDZB01000613
162688
Bacillota
GAT
Ile
>WENV170050170
CDZB01016895
162688
Bacillota
GAT
Ile
>WENV170050551
CDZB01031801
162688
Bacillota
GAT
Ile
>WENV170051166
CDZB01057428
162688
Bacillota
GAT
Ile
>WENV170051361
CDZB01066241
162688
Bacillota
GAT
Ile
>WENV170049855
CDZB01003983
162487
Bacillota
CGG
Pro
>WENV170051076
CDZB01054800
161895
Bacillota
GAC
Val
>WENV170050270
CDZB01020939
133221
Bacillota
CAA
Leu
>WENV170050520
CDZB01030480
106802
Bacillota
GTA
Tyr
>WENV170051188
CDZB01058140
106802
Bacillota
GTA
Tyr
>WENV170050739
CDZB01040082
374673
Bacillota
CTC
Glu
>WENV170051552
CDZB01073155
374673
Bacillota
CTC
Glu
>WENV170051558
CDZB01073197
374673
Bacillota
CTC
Glu
>WENV170051113
CDZB01055616
158271
Bacillota
CCT
Arg
>WENV170051319
CDZB01064032
158271
Bacillota
CCT
Arg
>WENV170050830
CDZB01044293
159089
Bacillota
GAT
Ile
>WENV170050730
CDZB01039327
50190
Bacillota
AAG
Leu
>WENV170050845
CDZB01045566
166292
Bacillota
GAT
Ile
>WENV170051088
CDZB01055436
371252
Bacillota
GTT
Asn
>WENV170051611
CDZB01075844
371252
Bacillota
GTT
Asn
>WENV170050877
CDZB01046337
171593
Bacillota
TGG
Pro
>WENV170051297
CDZB01063332
41297
Bacillota
TGA
Ser
>WENV170051053
CDZB01053321
450551
Bacillota
CCA
Trp
>WENV170049850
CDZB01003853
261358
Bacillota
GAA
Phe
>WENV170050145
CDZB01015683
261358
Bacillota
GAA
Phe
>WENV170051666
CDZB01077208
261393
Bacillota
CGT
Thr
>WENV170051442
CDZB01068851
450457
Bacillota
CTG
Gln
>WENV170050100
CDZB01014436
167205
Bacillota
TAC
Val
>WENV170050657
CDZB01036044
167205
Bacillota
TAC
Val
>WENV170051650
CDZB01076489
182424
Bacillota
CAT
Met
>WENV170050150
CDZB01016142
261310
Bacillota
CGT
Thr
>WENV170051036
CDZB01052787
261310
Bacillota
CGT
Thr
>WENV170050876
CDZB01046337
452372
Bacillota
CCA
Trp
>WENV170050886
CDZB01046955
452372
Bacillota
CCA
Trp
>WENV170051413
CDZB01067585
449102
Bacillota
CCA
Trp
>WENV170051300
CDZB01063394
159862
Bacillota
>WENV170050158
CDZB01016357
261584
Bacillota
>WENV170051170
CDZB01057492
261584
Bacillota
>WENV170049784
CDZB01000123
20902
Bacillota
GCT
Ser
>WENV170051265
CDZB01062102
293658
Bacillota
TAC
Val
>WENV170050532
CDZB01031173
159912
Bacillota
GAT
Ile
>WENV170051670
CDZB01077647
257976
Bacillota
CCC
Gly
>WENV170051180
CDZB01057569
276063
Bacillota
CTC
Glu
>WENV170050878
CDZB01046337
386213
Bacillota
TTC
Glu
>WENV170050519
CDZB01030480
258131
Bacillota
TGT
Thr
>WENV170050915
CDZB01047974
258131
Bacillota
TGT
Thr
>WENV170051187
CDZB01058140
258131
Bacillota
TGT
Thr
>WENV170051509
CDZB01071512
258131
Bacillota
TGT
Thr
>WENV170051625
CDZB01075844
131078
Bacillota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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