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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
85 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170056212
CDZF01040753
152201
Bacteroidota
TAC
Val
>WENV170056213
CDZF01040753
152201
Bacteroidota
TAC
Val
>WENV170056214
CDZF01040753
152201
Bacteroidota
TAC
Val
>WENV170055481
CDZF01007114
171829
Bacteroidota
CAT
Met
>WENV170055934
CDZF01028210
171829
Bacteroidota
CAT
Met
>WENV170055444
CDZF01005874
369487
Bacteroidota
>WENV170056292
CDZF01044641
478101
Bacteroidota
CTG
Gln
>WENV170055669
CDZF01015334
448691
Bacteroidota
TTG
Gln
>WENV170056078
CDZF01034910
160436
Bacteroidota
GGC
Ala
>WENV170055639
CDZF01014295
23774
Bacteroidota
GGA
Ser
>WENV170056154
CDZF01038727
118224
Bacteroidota
TAG
Leu
>WENV170056006
CDZF01031466
300555
Bacteroidota
CCA
Trp
>WENV170056256
CDZF01043168
258780
Bacteroidota
>WENV170055294
CDZF01000638
272161
Bacteroidota
CGT
Thr
>WENV170056032
CDZF01032647
258777
Bacteroidota
GAA
Phe
>WENV170056079
CDZF01035335
453390
Bacteroidota
TTG
Gln
>WENV170055561
CDZF01010594
105701
Bacteroidota
TAG
Leu
>WENV170056218
CDZF01040958
18662
Bacteroidota
GGA
Ser
>WENV170055518
CDZF01008357
261339
Bacteroidota
CCA
Trp
>WENV170055521
CDZF01008357
105937
Bacteroidota
GTA
Tyr
>WENV170056252
CDZF01042891
169676
Bacteroidota
GTG
His
>WENV170055656
CDZF01014632
91080
Bacteroidota
GTA
Tyr
>WENV170055517
CDZF01008357
261338
Bacteroidota
GTT
Asn
>WENV170055476
CDZF01006909
452097
Bacteroidota
CTG
Gln
>WENV170056138
CDZF01038131
452097
Bacteroidota
CTG
Gln
>WENV170055969
CDZF01030176
374505
Bacteroidota
CTC
Glu
>WENV170055524
CDZF01008492
154165
Bacteroidota
GGG
Pro
>WENV170055922
CDZF01028199
154165
Bacteroidota
GGG
Pro
>WENV170056096
CDZF01036741
154165
Bacteroidota
GGG
Pro
>WENV170055531
CDZF01008929
159918
Bacteroidota
GTG
His
>WENV170055911
CDZF01027521
153591
Bacteroidota
TGG
Pro
>WENV170056307
CDZF01045056
153591
Bacteroidota
TGG
Pro
>WENV170055659
CDZF01014632
159420
Bacteroidota
CAT
Met
>WENV170055666
CDZF01014979
293347
Bacteroidota
CCA
Trp
>WENV170055308
CDZF01001626
120345
Bacteroidota
TAG
Leu
>WENV170055752
CDZF01019159
120345
Bacteroidota
TAG
Leu
>WENV170056111
CDZF01037172
120345
Bacteroidota
TAG
Leu
>WENV170055605
CDZF01012411
370665
Bacteroidota
CCG
Arg
>WENV170055417
CDZF01005153
52815
Bacteroidota
TAA
Leu
>WENV170056194
CDZF01039967
52815
Bacteroidota
TAA
Leu
>WENV170055756
CDZF01019233
106801
Bacteroidota
CAG
Leu
>WENV170055784
CDZF01020499
24628
Bacteroidota
GGA
Ser
>WENV170056134
CDZF01037906
276085
Bacteroidota
TTT
Lys
>WENV170056320
CDZF01045916
83854
Bacteroidota
GAG
Leu
>WENV170055887
CDZF01025441
49817
Bacteroidota
TGA
Ser
>WENV170055519
CDZF01008357
449089
Bacteroidota
TTG
Gln
>WENV170055848
CDZF01023328
371246
Bacteroidota
CCT
Arg
>WENV170056102
CDZF01036876
160434
Bacteroidota
GTG
His
>WENV170056077
CDZF01034703
166971
Bacteroidota
>WENV170055807
CDZF01021689
162591
Bacteroidota
GTG
His
>WENV170056237
CDZF01042197
162591
Bacteroidota
GTG
His
>WENV170055696
CDZF01016504
369490
Bacteroidota
CTC
Glu
>WENV170055952
CDZF01029210
307992
Bacteroidota
GAA
Phe
>WENV170056025
CDZF01032244
24259
Bacteroidota
GGA
Ser
>WENV170055435
CDZF01005547
58386
Bacteroidota
TGA
Ser
>WENV170055708
CDZF01016854
58386
Bacteroidota
TGA
Ser
>WENV170055995
CDZF01031034
261335
Bacteroidota
TTT
Lys
>WENV170056262
CDZF01043487
166972
Bacteroidota
TGT
Thr
>WENV170056297
CDZF01044749
166972
Bacteroidota
TGT
Thr
>WENV170056331
CDZF01046274
288453
Bacteroidota
>WENV170056024
CDZF01032237
162594
Bacteroidota
GGC
Ala
>WENV170056189
CDZF01039952
162594
Bacteroidota
GGC
Ala
>WENV170056377
CDZF01048199
90587
Bacteroidota
TAG
Leu
>WENV170055516
CDZF01008357
261337
Bacteroidota
>WENV170055742
CDZF01018784
41238
Bacteroidota
TAA
Leu
>WENV170055992
CDZF01031027
193541
Bacteroidota
GTT
Asn
>WENV170055993
CDZF01031027
193541
Bacteroidota
GTT
Asn
>WENV170055905
CDZF01027147
162617
Bacteroidota
CAT
Met
>WENV170055364
CDZF01003614
232558
Bacteroidota
TGT
Thr
>WENV170056087
CDZF01036061
232558
Bacteroidota
TGT
Thr
>WENV170056222
CDZF01041413
258391
Bacteroidota
CTT
Lys
>WENV170055958
CDZF01029782
160459
Bacteroidota
GGC
Ala
>WENV170055520
CDZF01008357
371225
Bacteroidota
TTC
Glu
>WENV170055665
CDZF01014913
261432
Bacteroidota
CCA
Trp
>WENV170055886
CDZF01025441
261432
Bacteroidota
CCA
Trp
>WENV170055944
CDZF01028604
324834
Bacteroidota
CCC
Gly
>WENV170056160
CDZF01038904
324834
Bacteroidota
CCC
Gly
>WENV170055757
CDZF01019236
113804
Bacteroidota
CAA
Leu
>WENV170056319
CDZF01045916
105933
Bacteroidota
CAG
Leu
>WENV170056341
CDZF01046859
410456
Bacteroidota
CCC
Gly
>WENV170056375
CDZF01048081
410456
Bacteroidota
CCC
Gly
>WENV170055353
CDZF01003235
414056
Bacteroidota
GGT
Thr
>WENV170055959
CDZF01029791
414056
Bacteroidota
GGT
Thr
>WENV170055565
CDZF01010944
28588
Bacteroidota
GCT
Ser
>WENV170055785
CDZF01020508
28588
Bacteroidota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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