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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170055445
CDZF01005875
370534
Verrucomicrobiota
TGT
Thr
>WENV170056330
CDZF01046272
370537
Verrucomicrobiota
CCG
Arg
>WENV170055882
CDZF01025222
88984
Verrucomicrobiota
GTA
Tyr
>WENV170056325
CDZF01046272
448769
Verrucomicrobiota
TCC
Gly
>WENV170055439
CDZF01005720
88983
Verrucomicrobiota
TAA
Leu
>WENV170055852
CDZF01023468
88983
Verrucomicrobiota
TAA
Leu
>WENV170055723
CDZF01017696
65261
Verrucomicrobiota
CAG
Leu
>WENV170055871
CDZF01024877
370530
Verrucomicrobiota
TAC
Val
>WENV170056184
CDZF01039884
370526
Verrucomicrobiota
CTG
Gln
>WENV170055951
CDZF01028971
50031
Verrucomicrobiota
TGA
Ser
>WENV170055834
CDZF01022912
260058
Verrucomicrobiota
GGC
Ala
>WENV170056110
CDZF01037170
88985
Verrucomicrobiota
AAG
Leu
>WENV170056293
CDZF01044643
8030
Verrucomicrobiota
CGA
Ser
>WENV170055479
CDZF01007100
370525
Verrucomicrobiota
TTG
Gln
>WENV170055441
CDZF01005720
8029
Verrucomicrobiota
GCT
Ser
>WENV170055854
CDZF01023468
8029
Verrucomicrobiota
GCT
Ser
>WENV170055614
CDZF01013517
139132
Verrucomicrobiota
GTC
Asp
>WENV170056309
CDZF01045060
139132
Verrucomicrobiota
GTC
Asp
>WENV170056016
CDZF01031841
370538
Verrucomicrobiota
CGT
Thr
>WENV170056109
CDZF01037170
260061
Verrucomicrobiota
>WENV170056327
CDZF01046272
161141
Verrucomicrobiota
TGG
Pro
>WENV170055440
CDZF01005720
260057
Verrucomicrobiota
>WENV170055853
CDZF01023468
260057
Verrucomicrobiota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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