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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
117 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170059884
CDZH01065309
408459
Bacillota
TTG
Gln
>WENV170060296
CDZH01082673
283277
Bacillota
GTT
Asn
>WENV170060006
CDZH01070533
453866
Bacillota
GCA
Cys
>WENV170058360
CDZH01005356
270088
Bacillota
CGT
Thr
>WENV170058668
CDZH01018864
261394
Bacillota
CCG
Arg
>WENV170058272
CDZH01002490
261391
Bacillota
GTT
Asn
>WENV170059631
CDZH01055860
261391
Bacillota
GTT
Asn
>WENV170058351
CDZH01005342
261452
Bacillota
GCC
Gly
>WENV170058760
CDZH01022700
261452
Bacillota
GCC
Gly
>WENV170058764
CDZH01022700
261452
Bacillota
GCC
Gly
>WENV170059453
CDZH01048700
162480
Bacillota
ACG
Arg
>WENV170058662
CDZH01018751
183347
Bacillota
>WENV170059961
CDZH01068540
296231
Bacillota
TGC
Ala
>WENV170059549
CDZH01051356
369774
Bacillota
GGT
Thr
>WENV170059295
CDZH01042337
70198
Bacillota
CAA
Leu
>WENV170059536
CDZH01050841
369809
Bacillota
CTC
Glu
>WENV170059566
CDZH01052623
369809
Bacillota
CTC
Glu
>WENV170059174
CDZH01036593
182782
Bacillota
ACG
Arg
>WENV170059195
CDZH01037874
269920
Bacillota
CGC
Ala
>WENV170060171
CDZH01077205
269920
Bacillota
CGC
Ala
>WENV170059866
CDZH01064639
410090
Bacillota
GCC
Gly
>WENV170059909
CDZH01065980
410090
Bacillota
GCC
Gly
>WENV170060197
CDZH01078476
410090
Bacillota
GCC
Gly
>WENV170060199
CDZH01078484
410090
Bacillota
GCC
Gly
>WENV170058346
CDZH01005289
392172
Bacillota
TTC
Glu
>WENV170059634
CDZH01055879
184565
Bacillota
GAT
Ile
>WENV170058769
CDZH01023263
286917
Bacillota
TGC
Ala
>WENV170059317
CDZH01042775
448255
Bacillota
CTG
Gln
>WENV170059985
CDZH01069644
49778
Bacillota
AAG
Leu
>WENV170059305
CDZH01042342
272758
Bacillota
GCC
Gly
>WENV170059723
CDZH01058619
272758
Bacillota
GCC
Gly
>WENV170060046
CDZH01072062
272758
Bacillota
GCC
Gly
>WENV170058869
CDZH01026030
269973
Bacillota
CCA
Trp
>WENV170059994
CDZH01069898
269973
Bacillota
CCA
Trp
>WENV170060113
CDZH01074534
269973
Bacillota
CCA
Trp
>WENV170060225
CDZH01079869
269973
Bacillota
CCA
Trp
>WENV170058201
CDZH01000385
268483
Bacillota
CTT
Lys
>WENV170059512
CDZH01050259
268483
Bacillota
CTT
Lys
>WENV170059595
CDZH01054555
124820
Bacillota
TAG
Leu
>WENV170059496
CDZH01050080
162688
Bacillota
GAT
Ile
>WENV170060293
CDZH01082673
162688
Bacillota
GAT
Ile
>WENV170058409
CDZH01007328
162688
Bacillota
GAT
Ile
>WENV170058488
CDZH01011148
162688
Bacillota
GAT
Ile
>WENV170058605
CDZH01016665
162688
Bacillota
GAT
Ile
>WENV170058631
CDZH01017994
162688
Bacillota
GAT
Ile
>WENV170059535
CDZH01050839
392893
Bacillota
TTC
Glu
>WENV170060344
CDZH01084365
133221
Bacillota
CAA
Leu
>WENV170059525
CDZH01050819
106802
Bacillota
GTA
Tyr
>WENV170059987
CDZH01069774
106802
Bacillota
GTA
Tyr
>WENV170060089
CDZH01073843
261561
Bacillota
TGC
Ala
>WENV170058218
CDZH01000730
47790
Bacillota
TGA
Ser
>WENV170058704
CDZH01020119
47790
Bacillota
TGA
Ser
>WENV170060119
CDZH01075189
159237
Bacillota
TCT
Arg
>WENV170058781
CDZH01023326
90522
Bacillota
CAG
Leu
>WENV170058783
CDZH01023326
90522
Bacillota
CAG
Leu
>WENV170059454
CDZH01048703
90522
Bacillota
CAG
Leu
>WENV170059456
CDZH01048703
90522
Bacillota
CAG
Leu
>WENV170059505
CDZH01050170
374673
Bacillota
CTC
Glu
>WENV170059636
CDZH01055938
374673
Bacillota
CTC
Glu
>WENV170059757
CDZH01059892
374673
Bacillota
CTC
Glu
>WENV170059947
CDZH01067920
374673
Bacillota
CTC
Glu
>WENV170060083
CDZH01073282
374673
Bacillota
CTC
Glu
>WENV170059359
CDZH01044371
189541
Bacillota
GTC
Asp
>WENV170059823
CDZH01063203
131005
Bacillota
TAG
Leu
>WENV170059029
CDZH01030862
369393
Bacillota
TTC
Glu
>WENV170058495
CDZH01011277
160422
Bacillota
TCT
Arg
>WENV170058619
CDZH01017284
159089
Bacillota
GAT
Ile
>WENV170060071
CDZH01073140
159089
Bacillota
GAT
Ile
>WENV170058314
CDZH01003584
56553
Bacillota
CAG
Leu
>WENV170058378
CDZH01005589
56553
Bacillota
CAG
Leu
>WENV170058379
CDZH01005589
56553
Bacillota
CAG
Leu
>WENV170058330
CDZH01004677
370406
Bacillota
TTC
Glu
>WENV170060072
CDZH01073175
11993
Bacillota
GGA
Ser
>WENV170059878
CDZH01065309
370126
Bacillota
CTC
Glu
>WENV170059981
CDZH01069157
311391
Bacillota
>WENV170060266
CDZH01081318
258126
Bacillota
GCC
Gly
>WENV170059107
CDZH01034404
162605
Bacillota
CCT
Arg
>WENV170059645
CDZH01056014
308738
Bacillota
TTG
Gln
>WENV170058242
CDZH01001451
167205
Bacillota
TAC
Val
>WENV170058521
CDZH01012609
167205
Bacillota
TAC
Val
>WENV170058551
CDZH01014060
167205
Bacillota
TAC
Val
>WENV170058846
CDZH01025320
167205
Bacillota
TAC
Val
>WENV170059213
CDZH01038467
167205
Bacillota
TAC
Val
>WENV170059802
CDZH01061951
182424
Bacillota
CAT
Met
>WENV170059200
CDZH01037924
296620
Bacillota
GAA
Phe
>WENV170059227
CDZH01039237
376229
Bacillota
CTC
Glu
>WENV170059262
CDZH01040846
261310
Bacillota
CGT
Thr
>WENV170060121
CDZH01075231
261310
Bacillota
CGT
Thr
>WENV170059379
CDZH01045487
259284
Bacillota
CTT
Lys
>WENV170059187
CDZH01037568
283213
Bacillota
CTT
Lys
>WENV170060294
CDZH01082673
283213
Bacillota
CTT
Lys
>WENV170059993
CDZH01069898
159862
Bacillota
>WENV170059415
CDZH01046983
371445
Bacillota
>WENV170059141
CDZH01035931
293658
Bacillota
TAC
Val
>WENV170059924
CDZH01066641
451224
Bacillota
CCC
Gly
>WENV170059830
CDZH01063299
457544
Bacillota
TCC
Gly
>WENV170059489
CDZH01049452
265662
Bacillota
GGT
Thr
>WENV170059533
CDZH01050836
265662
Bacillota
GGT
Thr
>WENV170058800
CDZH01023986
375901
Bacillota
CCG
Arg
>WENV170059882
CDZH01065309
237000
Bacillota
TCT
Arg
>WENV170058844
CDZH01025320
258131
Bacillota
TGT
Thr
>WENV170059524
CDZH01050819
258131
Bacillota
TGT
Thr
>WENV170059897
CDZH01065561
258131
Bacillota
TGT
Thr
>WENV170059986
CDZH01069774
258131
Bacillota
TGT
Thr
>WENV170060194
CDZH01078062
258131
Bacillota
TGT
Thr
>WENV170059971
CDZH01069121
159239
Bacillota
CCT
Arg
>WENV170058396
CDZH01006646
390939
Bacillota
CTG
Gln
>WENV170059216
CDZH01038473
64855
Bacillota
CAG
Leu
>WENV170060224
CDZH01079869
105955
Bacillota
TAG
Leu
>WENV170058685
CDZH01019395
172178
Bacillota
GGG
Pro
>WENV170059356
CDZH01044371
392593
Bacillota
TTC
Glu
>WENV170058522
CDZH01012609
222762
Bacillota
GTC
Asp
>WENV170058758
CDZH01022700
222762
Bacillota
GTC
Asp
>WENV170058762
CDZH01022700
222762
Bacillota
GTC
Asp
>WENV170058842
CDZH01025319
222762
Bacillota
GTC
Asp
>WENV170058847
CDZH01025320
222762
Bacillota
GTC
Asp
>WENV170060299
CDZH01082673
222762
Bacillota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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