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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
113 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170059780
CDZH01061231
449143
Bacteroidota
TTG
Gln
>WENV170060057
CDZH01072517
258203
Bacteroidota
CCA
Trp
>WENV170059740
CDZH01059520
159893
Bacteroidota
TCT
Arg
>WENV170058467
CDZH01010062
166871
Bacteroidota
TCT
Arg
>WENV170058956
CDZH01028784
369487
Bacteroidota
>WENV170059806
CDZH01062102
478101
Bacteroidota
CTG
Gln
>WENV170059807
CDZH01062102
478101
Bacteroidota
CTG
Gln
>WENV170059808
CDZH01062102
478101
Bacteroidota
CTG
Gln
>WENV170058451
CDZH01009428
300555
Bacteroidota
CCA
Trp
>WENV170060052
CDZH01072434
258780
Bacteroidota
>WENV170058711
CDZH01020749
159421
Bacteroidota
GTG
His
>WENV170058712
CDZH01020749
159421
Bacteroidota
GTG
His
>WENV170059547
CDZH01051333
159421
Bacteroidota
GTG
His
>WENV170059548
CDZH01051333
159421
Bacteroidota
GTG
His
>WENV170059868
CDZH01064727
272161
Bacteroidota
CGT
Thr
>WENV170060053
CDZH01072471
272161
Bacteroidota
CGT
Thr
>WENV170058496
CDZH01011279
65110
Bacteroidota
CAG
Leu
>WENV170058925
CDZH01027458
258208
Bacteroidota
TTT
Lys
>WENV170058973
CDZH01029376
182139
Bacteroidota
CGG
Pro
>WENV170059586
CDZH01053950
139254
Bacteroidota
GAC
Val
>WENV170058804
CDZH01024000
85544
Bacteroidota
GAG
Leu
>WENV170060189
CDZH01077856
85544
Bacteroidota
GAG
Leu
>WENV170060190
CDZH01077856
85544
Bacteroidota
GAG
Leu
>WENV170059620
CDZH01055418
259292
Bacteroidota
CGT
Thr
>WENV170058651
CDZH01018688
50713
Bacteroidota
TGA
Ser
>WENV170058209
CDZH01000650
452097
Bacteroidota
CTG
Gln
>WENV170058405
CDZH01006714
374505
Bacteroidota
CTC
Glu
>WENV170058875
CDZH01026042
159918
Bacteroidota
GTG
His
>WENV170058418
CDZH01007909
124700
Bacteroidota
>WENV170059792
CDZH01061919
124700
Bacteroidota
>WENV170059795
CDZH01061919
124700
Bacteroidota
>WENV170059798
CDZH01061919
124700
Bacteroidota
>WENV170058477
CDZH01010542
153591
Bacteroidota
TGG
Pro
>WENV170060130
CDZH01075867
120345
Bacteroidota
TAG
Leu
>WENV170059416
CDZH01047040
238847
Bacteroidota
GGC
Ala
>WENV170058517
CDZH01012092
370133
Bacteroidota
CCG
Arg
>WENV170060143
CDZH01076452
370133
Bacteroidota
CCG
Arg
>WENV170059875
CDZH01065294
105932
Bacteroidota
TAG
Leu
>WENV170059876
CDZH01065300
105932
Bacteroidota
TAG
Leu
>WENV170058533
CDZH01013307
63141
Bacteroidota
TGA
Ser
>WENV170059935
CDZH01067217
63141
Bacteroidota
TGA
Ser
>WENV170059014
CDZH01030731
105470
Bacteroidota
TAG
Leu
>WENV170059289
CDZH01041933
236821
Bacteroidota
>WENV170059698
CDZH01057394
236821
Bacteroidota
>WENV170059931
CDZH01067062
322169
Bacteroidota
CCA
Trp
>WENV170059372
CDZH01044947
259289
Bacteroidota
CTC
Glu
>WENV170058258
CDZH01002069
155049
Bacteroidota
TAC
Val
>WENV170058259
CDZH01002069
155049
Bacteroidota
TAC
Val
>WENV170058260
CDZH01002069
155049
Bacteroidota
TAC
Val
>WENV170058906
CDZH01026900
155049
Bacteroidota
TAC
Val
>WENV170058907
CDZH01026900
155049
Bacteroidota
TAC
Val
>WENV170058969
CDZH01029372
155049
Bacteroidota
TAC
Val
>WENV170058970
CDZH01029372
155049
Bacteroidota
TAC
Val
>WENV170059078
CDZH01033107
155049
Bacteroidota
TAC
Val
>WENV170059330
CDZH01043041
155049
Bacteroidota
TAC
Val
>WENV170059554
CDZH01051958
155049
Bacteroidota
TAC
Val
>WENV170060316
CDZH01082795
155049
Bacteroidota
TAC
Val
>WENV170060317
CDZH01082795
155049
Bacteroidota
TAC
Val
>WENV170060318
CDZH01082795
155049
Bacteroidota
TAC
Val
>WENV170059588
CDZH01053968
261333
Bacteroidota
CCC
Gly
>WENV170058484
CDZH01010775
106801
Bacteroidota
CAG
Leu
>WENV170058419
CDZH01007909
65114
Bacteroidota
GAG
Leu
>WENV170059793
CDZH01061919
65114
Bacteroidota
GAG
Leu
>WENV170059796
CDZH01061919
65114
Bacteroidota
GAG
Leu
>WENV170059145
CDZH01036006
159953
Bacteroidota
CAT
Met
>WENV170059146
CDZH01036006
159953
Bacteroidota
CAT
Met
>WENV170058544
CDZH01013450
448605
Bacteroidota
CTG
Gln
>WENV170059668
CDZH01056091
448605
Bacteroidota
CTG
Gln
>WENV170059545
CDZH01051327
141365
Bacteroidota
GGG
Pro
>WENV170058823
CDZH01024676
448321
Bacteroidota
TTG
Gln
>WENV170058472
CDZH01010084
160434
Bacteroidota
GTG
His
>WENV170059730
CDZH01059250
166971
Bacteroidota
>WENV170059597
CDZH01054655
288732
Bacteroidota
CTT
Lys
>WENV170060183
CDZH01077809
288732
Bacteroidota
CTT
Lys
>WENV170060184
CDZH01077809
288732
Bacteroidota
CTT
Lys
>WENV170060185
CDZH01077809
288732
Bacteroidota
CTT
Lys
>WENV170060186
CDZH01077809
288732
Bacteroidota
CTT
Lys
>WENV170058232
CDZH01000798
369490
Bacteroidota
CTC
Glu
>WENV170060326
CDZH01083259
369490
Bacteroidota
CTC
Glu
>WENV170060327
CDZH01083259
369490
Bacteroidota
CTC
Glu
>WENV170059290
CDZH01042073
58386
Bacteroidota
TGA
Ser
>WENV170059284
CDZH01041746
386044
Bacteroidota
>WENV170059403
CDZH01046355
288453
Bacteroidota
>WENV170059580
CDZH01053303
288453
Bacteroidota
>WENV170058583
CDZH01015723
162594
Bacteroidota
GGC
Ala
>WENV170060172
CDZH01077291
162594
Bacteroidota
GGC
Ala
>WENV170058273
CDZH01002541
293859
Bacteroidota
CCA
Trp
>WENV170058821
CDZH01024676
41238
Bacteroidota
TAA
Leu
>WENV170060227
CDZH01079876
193541
Bacteroidota
GTT
Asn
>WENV170060228
CDZH01079876
193541
Bacteroidota
GTT
Asn
>WENV170060229
CDZH01079876
193541
Bacteroidota
GTT
Asn
>WENV170059285
CDZH01041746
121873
Bacteroidota
CAA
Leu
>WENV170058812
CDZH01024227
159412
Bacteroidota
GTC
Asp
>WENV170059198
CDZH01037905
159412
Bacteroidota
GTC
Asp
>WENV170059199
CDZH01037905
159412
Bacteroidota
GTC
Asp
>WENV170059596
CDZH01054650
160459
Bacteroidota
GGC
Ala
>WENV170060138
CDZH01076035
160415
Bacteroidota
TCT
Arg
>WENV170058747
CDZH01022250
448601
Bacteroidota
TTG
Gln
>WENV170060056
CDZH01072517
369492
Bacteroidota
GGT
Thr
>WENV170060334
CDZH01083324
377484
Bacteroidota
CCT
Arg
>WENV170059414
CDZH01046907
113804
Bacteroidota
CAA
Leu
>WENV170060153
CDZH01077082
160435
Bacteroidota
GGC
Ala
>WENV170058803
CDZH01024000
105933
Bacteroidota
CAG
Leu
>WENV170058452
CDZH01009432
142268
Bacteroidota
TAC
Val
>WENV170058446
CDZH01009305
410456
Bacteroidota
CCC
Gly
>WENV170058512
CDZH01011976
410456
Bacteroidota
CCC
Gly
>WENV170058614
CDZH01016701
414056
Bacteroidota
GGT
Thr
>WENV170058652
CDZH01018688
414056
Bacteroidota
GGT
Thr
>WENV170058904
CDZH01026824
414056
Bacteroidota
GGT
Thr
>WENV170059861
CDZH01064637
414056
Bacteroidota
GGT
Thr
>WENV170058695
CDZH01019940
105282
Bacteroidota
TAG
Leu
>WENV170059503
CDZH01050167
278748
Bacteroidota
CCC
Gly
>WENV170059137
CDZH01035306
261340
Bacteroidota
CTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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