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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170058444
CDZH01008742
169151
Thermodesulfobacteriota
TTC
Glu
>WENV170058482
CDZH01010684
169151
Thermodesulfobacteriota
TTC
Glu
>WENV170059087
CDZH01033800
169151
Thermodesulfobacteriota
TTC
Glu
>WENV170059182
CDZH01036722
169151
Thermodesulfobacteriota
TTC
Glu
>WENV170059212
CDZH01038418
169151
Thermodesulfobacteriota
TTC
Glu
>WENV170059122
CDZH01034522
270464
Thermodesulfobacteriota
GGT
Thr
>WENV170060179
CDZH01077782
231773
Thermodesulfobacteriota
GTC
Asp
>WENV170058403
CDZH01006658
205579
Thermodesulfobacteriota
ACG
Arg
>WENV170059478
CDZH01049423
205579
Thermodesulfobacteriota
ACG
Arg
>WENV170059664
CDZH01056027
205579
Thermodesulfobacteriota
ACG
Arg
>WENV170059984
CDZH01069365
205579
Thermodesulfobacteriota
ACG
Arg
>WENV170059081
CDZH01033195
377201
Thermodesulfobacteriota
CCC
Gly
>WENV170059083
CDZH01033195
377201
Thermodesulfobacteriota
CCC
Gly
>WENV170060086
CDZH01073295
377201
Thermodesulfobacteriota
CCC
Gly
>WENV170058862
CDZH01025779
170962
Thermodesulfobacteriota
CAT
Met
>WENV170058633
CDZH01018019
268423
Thermodesulfobacteriota
>WENV170059207
CDZH01037934
170965
Thermodesulfobacteriota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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