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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170069349
CDZP01039644
162410
Actinomycetota
TCT
Arg
>WENV170069267
CDZP01037188
261299
Actinomycetota
GCC
Gly
>WENV170069015
CDZP01027967
261298
Actinomycetota
CGT
Thr
>WENV170068370
CDZP01004255
26695
Actinomycetota
GAG
Leu
>WENV170069390
CDZP01040543
139249
Actinomycetota
GTC
Asp
>WENV170068499
CDZP01008990
162417
Actinomycetota
CGG
Pro
>WENV170068434
CDZP01006156
371217
Actinomycetota
CAC
Val
>WENV170069043
CDZP01029172
18633
Actinomycetota
CGA
Ser
>WENV170069157
CDZP01033617
261306
Actinomycetota
>WENV170068324
CDZP01002321
162411
Actinomycetota
CCG
Arg
>WENV170069107
CDZP01032392
371214
Actinomycetota
GTT
Asn
>WENV170069041
CDZP01029172
162414
Actinomycetota
GAT
Ile
>WENV170069047
CDZP01029561
26694
Actinomycetota
TGA
Ser
>WENV170069042
CDZP01029172
18632
Actinomycetota
GGA
Ser
>WENV170069200
CDZP01034670
162416
Actinomycetota
GTG
His
>WENV170069058
CDZP01030395
449079
Actinomycetota
CTG
Gln
>WENV170068787
CDZP01019168
124817
Actinomycetota
TAG
Leu
>WENV170068803
CDZP01019586
261304
Actinomycetota
GAA
Phe
>WENV170068826
CDZP01020091
162413
Actinomycetota
TTC
Glu
>WENV170069027
CDZP01028745
261307
Actinomycetota
TAC
Val
>WENV170068341
CDZP01003099
183611
Actinomycetota
GGG
Pro
>WENV170068977
CDZP01026838
65500
Actinomycetota
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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