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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
81 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170068383
CDZP01004667
283277
Bacillota
GTT
Asn
>WENV170069363
CDZP01039700
371877
Bacillota
CTG
Gln
>WENV170068271
CDZP01000335
131007
Bacillota
TAG
Leu
>WENV170069402
CDZP01041241
270088
Bacillota
CGT
Thr
>WENV170068565
CDZP01011808
261391
Bacillota
GTT
Asn
>WENV170068645
CDZP01013762
257968
Bacillota
GCC
Gly
>WENV170068727
CDZP01017042
257968
Bacillota
GCC
Gly
>WENV170068730
CDZP01017042
257968
Bacillota
GCC
Gly
>WENV170069455
CDZP01043313
68274
Bacillota
TAA
Leu
>WENV170068492
CDZP01008620
371229
Bacillota
CTG
Gln
>WENV170069137
CDZP01032830
46511
Bacillota
TAA
Leu
>WENV170069028
CDZP01028764
269920
Bacillota
CGC
Ala
>WENV170068644
CDZP01013762
257970
Bacillota
GAA
Phe
>WENV170068729
CDZP01017042
257970
Bacillota
GAA
Phe
>WENV170068267
CDZP01000335
159079
Bacillota
TCT
Arg
>WENV170069149
CDZP01033268
261354
Bacillota
GGT
Thr
>WENV170068617
CDZP01013034
47919
Bacillota
TGA
Ser
>WENV170068508
CDZP01009348
410090
Bacillota
GCC
Gly
>WENV170068838
CDZP01020944
410090
Bacillota
GCC
Gly
>WENV170069079
CDZP01031148
410090
Bacillota
GCC
Gly
>WENV170068691
CDZP01015410
392172
Bacillota
TTC
Glu
>WENV170069296
CDZP01038051
392172
Bacillota
TTC
Glu
>WENV170069303
CDZP01038412
392172
Bacillota
TTC
Glu
>WENV170069080
CDZP01031150
159242
Bacillota
CCG
Arg
>WENV170069151
CDZP01033268
159076
Bacillota
CAT
Met
>WENV170068293
CDZP01001581
258854
Bacillota
TGC
Ala
>WENV170069607
CDZP01050268
258854
Bacillota
TGC
Ala
>WENV170068524
CDZP01009804
161902
Bacillota
CAT
Met
>WENV170068278
CDZP01000337
371232
Bacillota
CTC
Glu
>WENV170068568
CDZP01012158
286917
Bacillota
TGC
Ala
>WENV170068249
CDZP01000001
49778
Bacillota
AAG
Leu
>WENV170068756
CDZP01017504
49778
Bacillota
AAG
Leu
>WENV170068746
CDZP01017486
272758
Bacillota
GCC
Gly
>WENV170069389
CDZP01040124
272758
Bacillota
GCC
Gly
>WENV170068256
CDZP01000330
162688
Bacillota
GAT
Ile
>WENV170068404
CDZP01005000
47790
Bacillota
TGA
Ser
>WENV170068650
CDZP01014142
369393
Bacillota
TTC
Glu
>WENV170069617
CDZP01050298
369393
Bacillota
TTC
Glu
>WENV170069292
CDZP01037655
293959
Bacillota
GGC
Ala
>WENV170069293
CDZP01037655
293959
Bacillota
GGC
Ala
>WENV170069068
CDZP01030409
369278
Bacillota
GCA
Cys
>WENV170068748
CDZP01017487
224291
Bacillota
CCT
Arg
>WENV170068352
CDZP01003799
56553
Bacillota
CAG
Leu
>WENV170068353
CDZP01003799
56553
Bacillota
CAG
Leu
>WENV170068354
CDZP01003799
56553
Bacillota
CAG
Leu
>WENV170068973
CDZP01026830
159074
Bacillota
ACG
Arg
>WENV170069635
CDZP01050736
159074
Bacillota
ACG
Arg
>WENV170068678
CDZP01015375
166292
Bacillota
GAT
Ile
>WENV170068534
CDZP01010644
47066
Bacillota
TGA
Ser
>WENV170068832
CDZP01020480
450457
Bacillota
CTG
Gln
>WENV170069101
CDZP01031930
64820
Bacillota
CAG
Leu
>WENV170069318
CDZP01038894
67413
Bacillota
CAG
Leu
>WENV170069531
CDZP01046654
67413
Bacillota
CAG
Leu
>WENV170068677
CDZP01015375
320672
Bacillota
TGC
Ala
>WENV170069540
CDZP01047422
448256
Bacillota
TTG
Gln
>WENV170069002
CDZP01027260
167205
Bacillota
TAC
Val
>WENV170069381
CDZP01040103
167205
Bacillota
TAC
Val
>WENV170069500
CDZP01044995
167205
Bacillota
TAC
Val
>WENV170069368
CDZP01039700
296620
Bacillota
GAA
Phe
>WENV170068918
CDZP01024584
261310
Bacillota
CGT
Thr
>WENV170068744
CDZP01017486
172620
Bacillota
GTC
Asp
>WENV170069387
CDZP01040124
172620
Bacillota
GTC
Asp
>WENV170068381
CDZP01004667
283213
Bacillota
CTT
Lys
>WENV170069577
CDZP01049187
283213
Bacillota
CTT
Lys
>WENV170069136
CDZP01032830
377818
Bacillota
GTT
Asn
>WENV170068917
CDZP01024579
269010
Bacillota
TGC
Ala
>WENV170069407
CDZP01041249
166295
Bacillota
GTT
Asn
>WENV170068795
CDZP01019562
215069
Bacillota
>WENV170068884
CDZP01023187
257976
Bacillota
CCC
Gly
>WENV170068812
CDZP01020024
276063
Bacillota
CTC
Glu
>WENV170069026
CDZP01028618
159345
Bacillota
GAT
Ile
>WENV170069000
CDZP01027260
258131
Bacillota
TGT
Thr
>WENV170069060
CDZP01030405
258131
Bacillota
TGT
Thr
>WENV170069379
CDZP01040103
258131
Bacillota
TGT
Thr
>WENV170068930
CDZP01024902
288387
Bacillota
GCC
Gly
>WENV170068374
CDZP01004636
261470
Bacillota
GTT
Asn
>WENV170068262
CDZP01000330
222762
Bacillota
GTC
Asp
>WENV170068386
CDZP01004667
222762
Bacillota
GTC
Asp
>WENV170069003
CDZP01027260
222762
Bacillota
GTC
Asp
>WENV170069382
CDZP01040103
222762
Bacillota
GTC
Asp
>WENV170069501
CDZP01044995
222762
Bacillota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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