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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
122 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170069247
CDZP01036750
449143
Bacteroidota
TTG
Gln
>WENV170068423
CDZP01005815
26247
Bacteroidota
CGA
Ser
>WENV170069069
CDZP01030413
65502
Bacteroidota
CAA
Leu
>WENV170069241
CDZP01036303
236813
Bacteroidota
GTC
Asp
>WENV170069562
CDZP01048793
236813
Bacteroidota
GTC
Asp
>WENV170068889
CDZP01023477
258780
Bacteroidota
>WENV170069017
CDZP01027980
258780
Bacteroidota
>WENV170068931
CDZP01025203
272161
Bacteroidota
CGT
Thr
>WENV170069653
CDZP01051154
272161
Bacteroidota
CGT
Thr
>WENV170068389
CDZP01004674
49944
Bacteroidota
TAA
Leu
>WENV170068391
CDZP01004674
49944
Bacteroidota
TAA
Leu
>WENV170068367
CDZP01004254
371226
Bacteroidota
CCT
Arg
>WENV170068541
CDZP01010976
182139
Bacteroidota
CGG
Pro
>WENV170069495
CDZP01044664
182139
Bacteroidota
CGG
Pro
>WENV170068850
CDZP01021402
139254
Bacteroidota
GAC
Val
>WENV170068350
CDZP01003797
105701
Bacteroidota
TAG
Leu
>WENV170069647
CDZP01050799
38349
Bacteroidota
CGA
Ser
>WENV170068281
CDZP01000802
259292
Bacteroidota
CGT
Thr
>WENV170068396
CDZP01004993
261339
Bacteroidota
CCA
Trp
>WENV170069251
CDZP01037128
261339
Bacteroidota
CCA
Trp
>WENV170069476
CDZP01044536
261339
Bacteroidota
CCA
Trp
>WENV170068399
CDZP01004993
105937
Bacteroidota
GTA
Tyr
>WENV170069254
CDZP01037128
105937
Bacteroidota
GTA
Tyr
>WENV170069479
CDZP01044536
105937
Bacteroidota
GTA
Tyr
>WENV170068395
CDZP01004993
261338
Bacteroidota
GTT
Asn
>WENV170069250
CDZP01037128
261338
Bacteroidota
GTT
Asn
>WENV170069475
CDZP01044536
261338
Bacteroidota
GTT
Asn
>WENV170069089
CDZP01031536
452097
Bacteroidota
CTG
Gln
>WENV170069535
CDZP01046943
452097
Bacteroidota
CTG
Gln
>WENV170068865
CDZP01022263
24636
Bacteroidota
GGA
Ser
>WENV170069642
CDZP01050744
159918
Bacteroidota
GTG
His
>WENV170068305
CDZP01001939
124700
Bacteroidota
>WENV170068308
CDZP01001939
124700
Bacteroidota
>WENV170068311
CDZP01001939
124700
Bacteroidota
>WENV170069121
CDZP01032418
124700
Bacteroidota
>WENV170069317
CDZP01038892
153591
Bacteroidota
TGG
Pro
>WENV170069656
CDZP01051160
120345
Bacteroidota
TAG
Leu
>WENV170068841
CDZP01021393
238847
Bacteroidota
GGC
Ala
>WENV170069636
CDZP01050737
205503
Bacteroidota
GTG
His
>WENV170068463
CDZP01007414
370133
Bacteroidota
CCG
Arg
>WENV170068371
CDZP01004256
63141
Bacteroidota
TGA
Ser
>WENV170068824
CDZP01020029
63141
Bacteroidota
TGA
Ser
>WENV170068264
CDZP01000333
105470
Bacteroidota
TAG
Leu
>WENV170068316
CDZP01002237
236821
Bacteroidota
>WENV170068500
CDZP01008994
236821
Bacteroidota
>WENV170069066
CDZP01030407
370665
Bacteroidota
CCG
Arg
>WENV170068945
CDZP01025646
271690
Bacteroidota
TTT
Lys
>WENV170068946
CDZP01025667
271690
Bacteroidota
TTT
Lys
>WENV170069059
CDZP01030403
322169
Bacteroidota
CCA
Trp
>WENV170069559
CDZP01048214
259289
Bacteroidota
CTC
Glu
>WENV170068363
CDZP01004252
155049
Bacteroidota
TAC
Val
>WENV170068364
CDZP01004252
155049
Bacteroidota
TAC
Val
>WENV170068365
CDZP01004252
155049
Bacteroidota
TAC
Val
>WENV170068366
CDZP01004252
155049
Bacteroidota
TAC
Val
>WENV170068926
CDZP01024599
155049
Bacteroidota
TAC
Val
>WENV170068927
CDZP01024599
155049
Bacteroidota
TAC
Val
>WENV170069114
CDZP01032414
155049
Bacteroidota
TAC
Val
>WENV170069115
CDZP01032414
155049
Bacteroidota
TAC
Val
>WENV170069439
CDZP01042552
155049
Bacteroidota
TAC
Val
>WENV170069440
CDZP01042552
155049
Bacteroidota
TAC
Val
>WENV170069527
CDZP01046571
155049
Bacteroidota
TAC
Val
>WENV170069528
CDZP01046571
155049
Bacteroidota
TAC
Val
>WENV170069036
CDZP01028914
106801
Bacteroidota
CAG
Leu
>WENV170068306
CDZP01001939
65114
Bacteroidota
GAG
Leu
>WENV170068309
CDZP01001939
65114
Bacteroidota
GAG
Leu
>WENV170069122
CDZP01032418
65114
Bacteroidota
GAG
Leu
>WENV170068501
CDZP01008994
322951
Bacteroidota
TTT
Lys
>WENV170068842
CDZP01021394
322951
Bacteroidota
TTT
Lys
>WENV170069158
CDZP01033660
322951
Bacteroidota
TTT
Lys
>WENV170069221
CDZP01035726
322951
Bacteroidota
TTT
Lys
>WENV170068473
CDZP01007841
22799
Bacteroidota
GGA
Ser
>WENV170068680
CDZP01015395
259271
Bacteroidota
CTT
Lys
>WENV170068681
CDZP01015395
259271
Bacteroidota
CTT
Lys
>WENV170068682
CDZP01015395
259271
Bacteroidota
CTT
Lys
>WENV170069289
CDZP01037644
159953
Bacteroidota
CAT
Met
>WENV170069290
CDZP01037644
159953
Bacteroidota
CAT
Met
>WENV170068725
CDZP01017036
448605
Bacteroidota
CTG
Gln
>WENV170068840
CDZP01021393
259272
Bacteroidota
CGT
Thr
>WENV170068397
CDZP01004993
449089
Bacteroidota
TTG
Gln
>WENV170069252
CDZP01037128
449089
Bacteroidota
TTG
Gln
>WENV170069477
CDZP01044536
449089
Bacteroidota
TTG
Gln
>WENV170068511
CDZP01009358
160434
Bacteroidota
GTG
His
>WENV170068577
CDZP01012423
162591
Bacteroidota
GTG
His
>WENV170068757
CDZP01017518
449090
Bacteroidota
CTG
Gln
>WENV170068758
CDZP01017518
449090
Bacteroidota
CTG
Gln
>WENV170069410
CDZP01041255
307992
Bacteroidota
GAA
Phe
>WENV170069561
CDZP01048789
24259
Bacteroidota
GGA
Ser
>WENV170069654
CDZP01051156
216052
Bacteroidota
TCT
Arg
>WENV170069108
CDZP01032401
139253
Bacteroidota
GGG
Pro
>WENV170069103
CDZP01031940
162594
Bacteroidota
GGC
Ala
>WENV170068869
CDZP01022272
65115
Bacteroidota
GAG
Leu
>WENV170068872
CDZP01022272
65115
Bacteroidota
GAG
Leu
>WENV170068786
CDZP01019078
414074
Bacteroidota
>WENV170068983
CDZP01027232
414074
Bacteroidota
>WENV170068394
CDZP01004993
261337
Bacteroidota
>WENV170069249
CDZP01037128
261337
Bacteroidota
>WENV170069474
CDZP01044536
261337
Bacteroidota
>WENV170069088
CDZP01031535
293859
Bacteroidota
CCA
Trp
>WENV170068400
CDZP01004994
193541
Bacteroidota
GTT
Asn
>WENV170068401
CDZP01004994
193541
Bacteroidota
GTT
Asn
>WENV170068402
CDZP01004994
193541
Bacteroidota
GTT
Asn
>WENV170069623
CDZP01050300
193541
Bacteroidota
GTT
Asn
>WENV170069624
CDZP01050300
193541
Bacteroidota
GTT
Asn
>WENV170069625
CDZP01050300
193541
Bacteroidota
GTT
Asn
>WENV170068788
CDZP01019544
160459
Bacteroidota
GGC
Ala
>WENV170068478
CDZP01008160
369579
Bacteroidota
GGT
Thr
>WENV170068864
CDZP01022262
448601
Bacteroidota
TTG
Gln
>WENV170068398
CDZP01004993
371225
Bacteroidota
TTC
Glu
>WENV170069253
CDZP01037128
371225
Bacteroidota
TTC
Glu
>WENV170069478
CDZP01044536
371225
Bacteroidota
TTC
Glu
>WENV170068287
CDZP01001170
377484
Bacteroidota
CCT
Arg
>WENV170068533
CDZP01010642
324834
Bacteroidota
CCC
Gly
>WENV170068496
CDZP01008871
370351
Bacteroidota
CCT
Arg
>WENV170068659
CDZP01014605
18452
Bacteroidota
GGA
Ser
>WENV170068980
CDZP01026869
18452
Bacteroidota
GGA
Ser
>WENV170068427
CDZP01006150
160435
Bacteroidota
GGC
Ala
>WENV170069481
CDZP01044538
371314
Bacteroidota
GCA
Cys
>WENV170068457
CDZP01007410
410456
Bacteroidota
CCC
Gly
>WENV170069652
CDZP01051154
414056
Bacteroidota
GGT
Thr
>WENV170069070
CDZP01030419
105282
Bacteroidota
TAG
Leu
>WENV170069008
CDZP01027527
278748
Bacteroidota
CCC
Gly
>WENV170069655
CDZP01051156
261340
Bacteroidota
CTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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