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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170069032
CDZP01028778
370534
Verrucomicrobiota
TGT
Thr
>WENV170068707
CDZP01015833
370537
Verrucomicrobiota
CCG
Arg
>WENV170068739
CDZP01017485
290976
Verrucomicrobiota
GGC
Ala
>WENV170068957
CDZP01026003
88984
Verrucomicrobiota
GTA
Tyr
>WENV170068953
CDZP01026003
88983
Verrucomicrobiota
TAA
Leu
>WENV170068554
CDZP01011650
65261
Verrucomicrobiota
CAG
Leu
>WENV170069319
CDZP01038899
370530
Verrucomicrobiota
TAC
Val
>WENV170068346
CDZP01003472
370526
Verrucomicrobiota
CTG
Gln
>WENV170068273
CDZP01000336
50031
Verrucomicrobiota
TGA
Ser
>WENV170068807
CDZP01019951
8030
Verrucomicrobiota
CGA
Ser
>WENV170068742
CDZP01017485
370525
Verrucomicrobiota
TTG
Gln
>WENV170068955
CDZP01026003
8029
Verrucomicrobiota
GCT
Ser
>WENV170068347
CDZP01003472
139132
Verrucomicrobiota
GTC
Asp
>WENV170068482
CDZP01008252
139132
Verrucomicrobiota
GTC
Asp
>WENV170068900
CDZP01023791
161141
Verrucomicrobiota
TGG
Pro
>WENV170068954
CDZP01026003
260057
Verrucomicrobiota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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