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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170069898
CDZQ01005904
105930
Actinomycetota
TAA
Leu
>WENV170070009
CDZQ01010535
105929
Actinomycetota
GTA
Tyr
>WENV170071541
CDZQ01060202
69295
Actinomycetota
CAG
Leu
>WENV170070125
CDZQ01015051
162410
Actinomycetota
TCT
Arg
>WENV170070360
CDZQ01022565
261299
Actinomycetota
GCC
Gly
>WENV170070852
CDZQ01037786
261299
Actinomycetota
GCC
Gly
>WENV170070854
CDZQ01037786
261299
Actinomycetota
GCC
Gly
>WENV170070856
CDZQ01037786
261299
Actinomycetota
GCC
Gly
>WENV170070961
CDZQ01041679
261298
Actinomycetota
CGT
Thr
>WENV170070851
CDZQ01037786
26695
Actinomycetota
GAG
Leu
>WENV170071157
CDZQ01047980
139249
Actinomycetota
GTC
Asp
>WENV170070007
CDZQ01010535
162417
Actinomycetota
CGG
Pro
>WENV170069894
CDZQ01005706
371217
Actinomycetota
CAC
Val
>WENV170069955
CDZQ01007951
18633
Actinomycetota
CGA
Ser
>WENV170070928
CDZQ01040679
261306
Actinomycetota
>WENV170070126
CDZQ01015051
162411
Actinomycetota
CCG
Arg
>WENV170071378
CDZQ01054788
371214
Actinomycetota
GTT
Asn
>WENV170071379
CDZQ01054788
371214
Actinomycetota
GTT
Asn
>WENV170069798
CDZQ01003764
162414
Actinomycetota
GAT
Ile
>WENV170069800
CDZQ01003764
162414
Actinomycetota
GAT
Ile
>WENV170069951
CDZQ01007951
162414
Actinomycetota
GAT
Ile
>WENV170069953
CDZQ01007951
162414
Actinomycetota
GAT
Ile
>WENV170070813
CDZQ01036397
26694
Actinomycetota
TGA
Ser
>WENV170070008
CDZQ01010535
370050
Actinomycetota
TGT
Thr
>WENV170069954
CDZQ01007951
18632
Actinomycetota
GGA
Ser
>WENV170070010
CDZQ01010535
261300
Actinomycetota
GGT
Thr
>WENV170070183
CDZQ01016263
478133
Actinomycetota
TTG
Gln
>WENV170070610
CDZQ01030915
448811
Actinomycetota
CCC
Gly
>WENV170070586
CDZQ01029869
162416
Actinomycetota
GTG
His
>WENV170069956
CDZQ01007954
449079
Actinomycetota
CTG
Gln
>WENV170069705
CDZQ01000995
124817
Actinomycetota
TAG
Leu
>WENV170071540
CDZQ01060202
261304
Actinomycetota
GAA
Phe
>WENV170070702
CDZQ01033406
162413
Actinomycetota
TTC
Glu
>WENV170070013
CDZQ01010535
261307
Actinomycetota
TAC
Val
>WENV170070930
CDZQ01040679
183611
Actinomycetota
GGG
Pro
>WENV170069822
CDZQ01004189
65500
Actinomycetota
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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