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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
129 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170070594
CDZQ01030011
449143
Bacteroidota
TTG
Gln
>WENV170070066
CDZQ01013221
26247
Bacteroidota
CGA
Ser
>WENV170070278
CDZQ01019524
65502
Bacteroidota
CAA
Leu
>WENV170070118
CDZQ01014991
236813
Bacteroidota
GTC
Asp
>WENV170070127
CDZQ01015054
236813
Bacteroidota
GTC
Asp
>WENV170070128
CDZQ01015054
236813
Bacteroidota
GTC
Asp
>WENV170070487
CDZQ01027383
236813
Bacteroidota
GTC
Asp
>WENV170070797
CDZQ01036042
236813
Bacteroidota
GTC
Asp
>WENV170070798
CDZQ01036042
236813
Bacteroidota
GTC
Asp
>WENV170070799
CDZQ01036042
236813
Bacteroidota
GTC
Asp
>WENV170071429
CDZQ01056360
448691
Bacteroidota
TTG
Gln
>WENV170070744
CDZQ01035033
258780
Bacteroidota
>WENV170071353
CDZQ01054277
258780
Bacteroidota
>WENV170071390
CDZQ01055282
258780
Bacteroidota
>WENV170070590
CDZQ01029871
160416
Bacteroidota
GTG
His
>WENV170071285
CDZQ01051743
272161
Bacteroidota
CGT
Thr
>WENV170070810
CDZQ01036393
65110
Bacteroidota
CAG
Leu
>WENV170071510
CDZQ01058416
65110
Bacteroidota
CAG
Leu
>WENV170070602
CDZQ01030408
49944
Bacteroidota
TAA
Leu
>WENV170070816
CDZQ01036434
49944
Bacteroidota
TAA
Leu
>WENV170070818
CDZQ01036434
49944
Bacteroidota
TAA
Leu
>WENV170070917
CDZQ01040265
49944
Bacteroidota
TAA
Leu
>WENV170070919
CDZQ01040265
49944
Bacteroidota
TAA
Leu
>WENV170069922
CDZQ01006725
371226
Bacteroidota
CCT
Arg
>WENV170071021
CDZQ01043752
371226
Bacteroidota
CCT
Arg
>WENV170071504
CDZQ01058411
54117
Bacteroidota
TGA
Ser
>WENV170070070
CDZQ01013222
182139
Bacteroidota
CGG
Pro
>WENV170070807
CDZQ01036393
182139
Bacteroidota
CGG
Pro
>WENV170070238
CDZQ01018087
139254
Bacteroidota
GAC
Val
>WENV170070395
CDZQ01024422
105701
Bacteroidota
TAG
Leu
>WENV170069970
CDZQ01008479
38349
Bacteroidota
CGA
Ser
>WENV170071422
CDZQ01056344
259292
Bacteroidota
CGT
Thr
>WENV170070366
CDZQ01022824
65111
Bacteroidota
CAA
Leu
>WENV170071456
CDZQ01057379
65111
Bacteroidota
CAA
Leu
>WENV170069658
CDZQ01000001
26362
Bacteroidota
GCT
Ser
>WENV170069890
CDZQ01005697
261339
Bacteroidota
CCA
Trp
>WENV170070670
CDZQ01032001
261339
Bacteroidota
CCA
Trp
>WENV170069783
CDZQ01002870
101772
Bacteroidota
GTA
Tyr
>WENV170070120
CDZQ01014991
101772
Bacteroidota
GTA
Tyr
>WENV170070591
CDZQ01029871
101772
Bacteroidota
GTA
Tyr
>WENV170071513
CDZQ01058416
101772
Bacteroidota
GTA
Tyr
>WENV170069893
CDZQ01005697
105937
Bacteroidota
GTA
Tyr
>WENV170070673
CDZQ01032001
105937
Bacteroidota
GTA
Tyr
>WENV170069889
CDZQ01005697
261338
Bacteroidota
GTT
Asn
>WENV170070669
CDZQ01032001
261338
Bacteroidota
GTT
Asn
>WENV170069792
CDZQ01003397
374505
Bacteroidota
CTC
Glu
>WENV170070481
CDZQ01027374
154165
Bacteroidota
GGG
Pro
>WENV170070793
CDZQ01036040
153591
Bacteroidota
TGG
Pro
>WENV170069974
CDZQ01008502
120345
Bacteroidota
TAG
Leu
>WENV170070795
CDZQ01036041
238847
Bacteroidota
GGC
Ala
>WENV170069781
CDZQ01002870
205503
Bacteroidota
GTG
His
>WENV170070122
CDZQ01015041
105470
Bacteroidota
TAG
Leu
>WENV170070906
CDZQ01039749
207722
Bacteroidota
GTT
Asn
>WENV170069745
CDZQ01002323
236821
Bacteroidota
>WENV170070014
CDZQ01010536
236821
Bacteroidota
>WENV170070306
CDZQ01020989
370665
Bacteroidota
CCG
Arg
>WENV170069964
CDZQ01008115
322169
Bacteroidota
CCA
Trp
>WENV170070794
CDZQ01036041
322169
Bacteroidota
CCA
Trp
>WENV170070981
CDZQ01042420
259302
Bacteroidota
>WENV170069764
CDZQ01002848
24628
Bacteroidota
GGA
Ser
>WENV170070301
CDZQ01020618
322951
Bacteroidota
TTT
Lys
>WENV170071432
CDZQ01056421
322951
Bacteroidota
TTT
Lys
>WENV170070069
CDZQ01013221
71334
Bacteroidota
GAG
Leu
>WENV170071511
CDZQ01058416
71334
Bacteroidota
GAG
Leu
>WENV170071443
CDZQ01056885
259271
Bacteroidota
CTT
Lys
>WENV170071444
CDZQ01056885
259271
Bacteroidota
CTT
Lys
>WENV170071445
CDZQ01056885
259271
Bacteroidota
CTT
Lys
>WENV170071501
CDZQ01058411
259271
Bacteroidota
CTT
Lys
>WENV170070796
CDZQ01036041
259272
Bacteroidota
CGT
Thr
>WENV170070811
CDZQ01036393
259272
Bacteroidota
CGT
Thr
>WENV170070834
CDZQ01036945
141365
Bacteroidota
GGG
Pro
>WENV170069891
CDZQ01005697
449089
Bacteroidota
TTG
Gln
>WENV170070671
CDZQ01032001
449089
Bacteroidota
TTG
Gln
>WENV170071503
CDZQ01058411
49945
Bacteroidota
TGA
Ser
>WENV170070642
CDZQ01031743
160434
Bacteroidota
GTG
His
>WENV170070809
CDZQ01036393
160417
Bacteroidota
GGC
Ala
>WENV170071502
CDZQ01058411
288732
Bacteroidota
CTT
Lys
>WENV170070024
CDZQ01011490
448600
Bacteroidota
CTG
Gln
>WENV170070025
CDZQ01011490
448600
Bacteroidota
CTG
Gln
>WENV170070026
CDZQ01011490
448600
Bacteroidota
CTG
Gln
>WENV170070759
CDZQ01035502
448600
Bacteroidota
CTG
Gln
>WENV170070760
CDZQ01035502
448600
Bacteroidota
CTG
Gln
>WENV170071275
CDZQ01051245
162591
Bacteroidota
GTG
His
>WENV170070665
CDZQ01031959
449090
Bacteroidota
CTG
Gln
>WENV170070666
CDZQ01031959
449090
Bacteroidota
CTG
Gln
>WENV170070667
CDZQ01031959
449090
Bacteroidota
CTG
Gln
>WENV170071260
CDZQ01050233
449090
Bacteroidota
CTG
Gln
>WENV170071261
CDZQ01050233
449090
Bacteroidota
CTG
Gln
>WENV170071262
CDZQ01050233
449090
Bacteroidota
CTG
Gln
>WENV170070132
CDZQ01015207
24259
Bacteroidota
GGA
Ser
>WENV170070729
CDZQ01034578
58386
Bacteroidota
TGA
Ser
>WENV170070866
CDZQ01038369
58386
Bacteroidota
TGA
Ser
>WENV170071561
CDZQ01060724
216052
Bacteroidota
TCT
Arg
>WENV170071544
CDZQ01060247
139253
Bacteroidota
GGG
Pro
>WENV170069990
CDZQ01009075
162594
Bacteroidota
GGC
Ala
>WENV170069943
CDZQ01007539
414074
Bacteroidota
>WENV170069971
CDZQ01008479
414074
Bacteroidota
>WENV170071057
CDZQ01044739
414074
Bacteroidota
>WENV170071176
CDZQ01048327
414074
Bacteroidota
>WENV170069888
CDZQ01005697
261337
Bacteroidota
>WENV170070668
CDZQ01032001
261337
Bacteroidota
>WENV170070523
CDZQ01028454
293859
Bacteroidota
CCA
Trp
>WENV170071428
CDZQ01056359
160458
Bacteroidota
>WENV170070521
CDZQ01028454
95591
Bacteroidota
GTA
Tyr
>WENV170071175
CDZQ01048327
142773
Bacteroidota
TGG
Pro
>WENV170069780
CDZQ01002868
160459
Bacteroidota
GGC
Ala
>WENV170070575
CDZQ01029713
160459
Bacteroidota
GGC
Ala
>WENV170070522
CDZQ01028454
369579
Bacteroidota
GGT
Thr
>WENV170071427
CDZQ01056355
160415
Bacteroidota
TCT
Arg
>WENV170070899
CDZQ01039736
448601
Bacteroidota
TTG
Gln
>WENV170070984
CDZQ01042814
448601
Bacteroidota
TTG
Gln
>WENV170069892
CDZQ01005697
371225
Bacteroidota
TTC
Glu
>WENV170070672
CDZQ01032001
371225
Bacteroidota
TTC
Glu
>WENV170069695
CDZQ01000896
377484
Bacteroidota
CCT
Arg
>WENV170069806
CDZQ01004039
324834
Bacteroidota
CCC
Gly
>WENV170069730
CDZQ01001850
370351
Bacteroidota
CCT
Arg
>WENV170070044
CDZQ01012290
18452
Bacteroidota
GGA
Ser
>WENV170070513
CDZQ01027928
18452
Bacteroidota
GGA
Ser
>WENV170070911
CDZQ01040265
18452
Bacteroidota
GGA
Ser
>WENV170071273
CDZQ01051224
18452
Bacteroidota
GGA
Ser
>WENV170071406
CDZQ01055806
160435
Bacteroidota
GGC
Ala
>WENV170070898
CDZQ01039378
469658
Bacteroidota
CTG
Gln
>WENV170070274
CDZQ01019502
371314
Bacteroidota
GCA
Cys
>WENV170070934
CDZQ01040763
410456
Bacteroidota
CCC
Gly
>WENV170071249
CDZQ01050218
414056
Bacteroidota
GGT
Thr
>WENV170070365
CDZQ01022824
105282
Bacteroidota
TAG
Leu
>WENV170070985
CDZQ01042814
105282
Bacteroidota
TAG
Leu
>WENV170071457
CDZQ01057379
105282
Bacteroidota
TAG
Leu
>WENV170071562
CDZQ01060724
261340
Bacteroidota
CTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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