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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170070757
CDZQ01035416
169151
Thermodesulfobacteriota
TTC
Glu
>WENV170071124
CDZQ01046250
169151
Thermodesulfobacteriota
TTC
Glu
>WENV170071253
CDZQ01050222
169151
Thermodesulfobacteriota
TTC
Glu
>WENV170070626
CDZQ01030998
163103
Thermodesulfobacteriota
GGG
Pro
>WENV170071043
CDZQ01044327
163103
Thermodesulfobacteriota
GGG
Pro
>WENV170071103
CDZQ01045756
163103
Thermodesulfobacteriota
GGG
Pro
>WENV170071055
CDZQ01044710
231773
Thermodesulfobacteriota
GTC
Asp
>WENV170071054
CDZQ01044710
268465
Thermodesulfobacteriota
CAC
Val
>WENV170070060
CDZQ01012767
377201
Thermodesulfobacteriota
CCC
Gly
>WENV170071566
CDZQ01060735
28067
Thermodesulfobacteriota
TGA
Ser
>WENV170071550
CDZQ01060655
202467
Thermodesulfobacteriota
GAT
Ile
>WENV170070018
CDZQ01010609
5649
Thermodesulfobacteriota
>WENV170070497
CDZQ01027407
170962
Thermodesulfobacteriota
CAT
Met
>WENV170069999
CDZQ01009637
268423
Thermodesulfobacteriota
>WENV170070201
CDZQ01017187
81866
Thermodesulfobacteriota
CAG
Leu
>WENV170070607
CDZQ01030553
81866
Thermodesulfobacteriota
CAG
Leu
>WENV170069874
CDZQ01005675
271617
Thermodesulfobacteriota
GGT
Thr
>WENV170070964
CDZQ01042008
92150
Thermodesulfobacteriota
GTA
Tyr
>WENV170069950
CDZQ01007947
127941
Thermodesulfobacteriota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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