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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
149 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170079530
CDZW01008728
261473
Bacillota
CTT
Lys
>WENV170079610
CDZW01010800
269918
Bacillota
CTT
Lys
>WENV170079611
CDZW01010800
269918
Bacillota
CTT
Lys
>WENV170079612
CDZW01010800
269918
Bacillota
CTT
Lys
>WENV170079613
CDZW01010800
269918
Bacillota
CTT
Lys
>WENV170079614
CDZW01010800
269918
Bacillota
CTT
Lys
>WENV170079728
CDZW01015923
269918
Bacillota
CTT
Lys
>WENV170079729
CDZW01015923
269918
Bacillota
CTT
Lys
>WENV170079730
CDZW01015923
269918
Bacillota
CTT
Lys
>WENV170080349
CDZW01042318
257969
Bacillota
TAC
Val
>WENV170079815
CDZW01020005
261392
Bacillota
GAA
Phe
>WENV170080040
CDZW01029867
261392
Bacillota
GAA
Phe
>WENV170080112
CDZW01031374
387058
Bacillota
CCT
Arg
>WENV170079869
CDZW01021959
159235
Bacillota
GTC
Asp
>WENV170080350
CDZW01042318
159235
Bacillota
GTC
Asp
>WENV170080263
CDZW01037768
261394
Bacillota
CCG
Arg
>WENV170080426
CDZW01045533
162485
Bacillota
CAT
Met
>WENV170079556
CDZW01008794
162485
Bacillota
CAT
Met
>WENV170079457
CDZW01005078
261452
Bacillota
GCC
Gly
>WENV170080439
CDZW01046218
257968
Bacillota
GCC
Gly
>WENV170079743
CDZW01016967
257968
Bacillota
GCC
Gly
>WENV170079797
CDZW01019620
257968
Bacillota
GCC
Gly
>WENV170080235
CDZW01036435
257968
Bacillota
GCC
Gly
>WENV170080348
CDZW01042318
257968
Bacillota
GCC
Gly
>WENV170079512
CDZW01007566
162480
Bacillota
ACG
Arg
>WENV170079753
CDZW01017412
369774
Bacillota
GGT
Thr
>WENV170080216
CDZW01035549
182164
Bacillota
CGG
Pro
>WENV170080288
CDZW01038924
42153
Bacillota
TAA
Leu
>WENV170080027
CDZW01029494
269920
Bacillota
CGC
Ala
>WENV170079796
CDZW01019620
257970
Bacillota
GAA
Phe
>WENV170079311
CDZW01000443
393129
Bacillota
CTC
Glu
>WENV170079574
CDZW01009572
393129
Bacillota
CTC
Glu
>WENV170080038
CDZW01029840
393129
Bacillota
CTC
Glu
>WENV170080346
CDZW01042063
393129
Bacillota
CTC
Glu
>WENV170079676
CDZW01013779
159242
Bacillota
CCG
Arg
>WENV170079918
CDZW01024411
159242
Bacillota
CCG
Arg
>WENV170080048
CDZW01030165
177388
Bacillota
ACG
Arg
>WENV170080049
CDZW01030165
177388
Bacillota
ACG
Arg
>WENV170080255
CDZW01037334
269960
Bacillota
CCA
Trp
>WENV170079428
CDZW01004301
257972
Bacillota
CGG
Pro
>WENV170080229
CDZW01036215
257972
Bacillota
CGG
Pro
>WENV170080278
CDZW01038402
64854
Bacillota
TAA
Leu
>WENV170079872
CDZW01022002
124618
Bacillota
GAG
Leu
>WENV170080162
CDZW01032986
124618
Bacillota
GAG
Leu
>WENV170079525
CDZW01008352
259283
Bacillota
CGT
Thr
>WENV170080382
CDZW01044189
451223
Bacillota
GCA
Cys
>WENV170080481
CDZW01047717
286917
Bacillota
TGC
Ala
>WENV170079447
CDZW01005065
286917
Bacillota
TGC
Ala
>WENV170079566
CDZW01009541
286917
Bacillota
TGC
Ala
>WENV170079840
CDZW01020758
286917
Bacillota
TGC
Ala
>WENV170079414
CDZW01003828
448255
Bacillota
CTG
Gln
>WENV170079427
CDZW01004301
448255
Bacillota
CTG
Gln
>WENV170080118
CDZW01031819
448255
Bacillota
CTG
Gln
>WENV170080228
CDZW01036215
448255
Bacillota
CTG
Gln
>WENV170079716
CDZW01015875
159234
Bacillota
CAC
Val
>WENV170079790
CDZW01019303
159234
Bacillota
CAC
Val
>WENV170080184
CDZW01034009
159234
Bacillota
CAC
Val
>WENV170080046
CDZW01030163
181889
Bacillota
>WENV170080480
CDZW01047717
159433
Bacillota
GAT
Ile
>WENV170079839
CDZW01020758
159433
Bacillota
GAT
Ile
>WENV170079398
CDZW01003570
162688
Bacillota
GAT
Ile
>WENV170079802
CDZW01019666
162688
Bacillota
GAT
Ile
>WENV170080324
CDZW01041255
162688
Bacillota
GAT
Ile
>WENV170079581
CDZW01009606
162487
Bacillota
CGG
Pro
>WENV170079830
CDZW01020421
133221
Bacillota
CAA
Leu
>WENV170079429
CDZW01004365
18457
Bacillota
GCT
Ser
>WENV170079503
CDZW01007178
106802
Bacillota
GTA
Tyr
>WENV170080444
CDZW01046250
159237
Bacillota
TCT
Arg
>WENV170079744
CDZW01016982
159237
Bacillota
TCT
Arg
>WENV170079459
CDZW01005201
90522
Bacillota
CAG
Leu
>WENV170080489
CDZW01048230
177383
Bacillota
CGG
Pro
>WENV170079630
CDZW01011968
374673
Bacillota
CTC
Glu
>WENV170079314
CDZW01000504
105206
Bacillota
GTA
Tyr
>WENV170080283
CDZW01038655
105206
Bacillota
GTA
Tyr
>WENV170079773
CDZW01018454
371263
Bacillota
TTG
Gln
>WENV170079909
CDZW01024036
371263
Bacillota
TTG
Gln
>WENV170079401
CDZW01003602
293188
Bacillota
GTC
Asp
>WENV170079389
CDZW01003239
189541
Bacillota
GTC
Asp
>WENV170079781
CDZW01018873
189541
Bacillota
GTC
Asp
>WENV170080099
CDZW01031226
158271
Bacillota
CCT
Arg
>WENV170080141
CDZW01032644
259286
Bacillota
TTT
Lys
>WENV170080366
CDZW01043608
369393
Bacillota
TTC
Glu
>WENV170079386
CDZW01002876
369393
Bacillota
TTC
Glu
>WENV170080277
CDZW01038300
369393
Bacillota
TTC
Glu
>WENV170079900
CDZW01023184
293959
Bacillota
GGC
Ala
>WENV170080477
CDZW01047493
50190
Bacillota
AAG
Leu
>WENV170079555
CDZW01008768
50190
Bacillota
AAG
Leu
>WENV170080214
CDZW01035549
50190
Bacillota
AAG
Leu
>WENV170080215
CDZW01035549
50190
Bacillota
AAG
Leu
>WENV170079313
CDZW01000504
369390
Bacillota
TGT
Thr
>WENV170079567
CDZW01009541
166292
Bacillota
GAT
Ile
>WENV170079921
CDZW01024707
371252
Bacillota
GTT
Asn
>WENV170080441
CDZW01046222
259285
Bacillota
CTG
Gln
>WENV170079472
CDZW01006030
370128
Bacillota
GCC
Gly
>WENV170079927
CDZW01024748
370128
Bacillota
GCC
Gly
>WENV170079928
CDZW01024748
370128
Bacillota
GCC
Gly
>WENV170080484
CDZW01047827
11993
Bacillota
GGA
Ser
>WENV170080113
CDZW01031634
11993
Bacillota
GGA
Ser
>WENV170080157
CDZW01032868
370126
Bacillota
CTC
Glu
>WENV170080158
CDZW01032868
370126
Bacillota
CTC
Glu
>WENV170079959
CDZW01025924
41297
Bacillota
TGA
Ser
>WENV170079843
CDZW01020776
371251
Bacillota
>WENV170079559
CDZW01009057
64856
Bacillota
CAA
Leu
>WENV170080267
CDZW01038134
131055
Bacillota
TAG
Leu
>WENV170079531
CDZW01008728
371335
Bacillota
CTC
Glu
>WENV170079569
CDZW01009552
159246
Bacillota
CGC
Ala
>WENV170079941
CDZW01025817
159246
Bacillota
CGC
Ala
>WENV170079510
CDZW01007515
49796
Bacillota
TGA
Ser
>WENV170079876
CDZW01022490
49796
Bacillota
TGA
Ser
>WENV170079679
CDZW01013961
159344
Bacillota
>WENV170079814
CDZW01020005
162457
Bacillota
>WENV170080316
CDZW01040937
162457
Bacillota
>WENV170079511
CDZW01007515
5393
Bacillota
GCT
Ser
>WENV170079854
CDZW01021309
5393
Bacillota
GCT
Ser
>WENV170080189
CDZW01034504
67413
Bacillota
CAG
Leu
>WENV170080413
CDZW01045241
448256
Bacillota
TTG
Gln
>WENV170080438
CDZW01046218
448256
Bacillota
TTG
Gln
>WENV170079720
CDZW01015899
167205
Bacillota
TAC
Val
>WENV170080287
CDZW01038921
182424
Bacillota
CAT
Met
>WENV170080110
CDZW01031303
452372
Bacillota
CCA
Trp
>WENV170079306
CDZW01000396
259284
Bacillota
CTT
Lys
>WENV170080309
CDZW01040114
259284
Bacillota
CTT
Lys
>WENV170080310
CDZW01040114
259284
Bacillota
CTT
Lys
>WENV170079356
CDZW01002125
65112
Bacillota
AAG
Leu
>WENV170079357
CDZW01002125
65112
Bacillota
AAG
Leu
>WENV170079944
CDZW01025909
65112
Bacillota
AAG
Leu
>WENV170079945
CDZW01025909
65112
Bacillota
AAG
Leu
>WENV170079396
CDZW01003263
257960
Bacillota
CGC
Ala
>WENV170080210
CDZW01035496
448207
Bacillota
CCC
Gly
>WENV170080457
CDZW01046710
20902
Bacillota
GCT
Ser
>WENV170079507
CDZW01007268
159236
Bacillota
GTT
Asn
>WENV170079562
CDZW01009157
159236
Bacillota
GTT
Asn
>WENV170079595
CDZW01010102
159236
Bacillota
GTT
Asn
>WENV170080211
CDZW01035510
159236
Bacillota
GTT
Asn
>WENV170080431
CDZW01045585
257976
Bacillota
CCC
Gly
>WENV170079502
CDZW01007178
258131
Bacillota
TGT
Thr
>WENV170080271
CDZW01038181
258131
Bacillota
TGT
Thr
>WENV170079845
CDZW01020779
71745
Bacillota
TAA
Leu
>WENV170080440
CDZW01046218
369392
Bacillota
GCA
Cys
>WENV170079438
CDZW01004692
257965
Bacillota
TGG
Pro
>WENV170080319
CDZW01041076
64855
Bacillota
CAG
Leu
>WENV170079771
CDZW01018454
162488
Bacillota
TCT
Arg
>WENV170079699
CDZW01015131
105955
Bacillota
TAG
Leu
>WENV170080445
CDZW01046250
159238
Bacillota
GTG
His
>WENV170079745
CDZW01016982
159238
Bacillota
GTG
His
>WENV170079523
CDZW01008007
261470
Bacillota
GTT
Asn
>WENV170079534
CDZW01008749
369391
Bacillota
TCC
Gly
>WENV170080356
CDZW01042780
131078
Bacillota
TAG
Leu
>WENV170080412
CDZW01045221
131078
Bacillota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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