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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
107 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170082464
CDZY01054311
152201
Bacteroidota
TAC
Val
>WENV170082465
CDZY01054311
152201
Bacteroidota
TAC
Val
>WENV170082281
CDZY01046308
449143
Bacteroidota
TTG
Gln
>WENV170081349
CDZY01012822
161400
Bacteroidota
>WENV170081532
CDZY01019184
26247
Bacteroidota
CGA
Ser
>WENV170081820
CDZY01029440
65502
Bacteroidota
CAA
Leu
>WENV170082545
CDZY01058222
371247
Bacteroidota
TTC
Glu
>WENV170081868
CDZY01031703
448691
Bacteroidota
TTG
Gln
>WENV170081011
CDZY01000477
160436
Bacteroidota
GGC
Ala
>WENV170081142
CDZY01006435
160436
Bacteroidota
GGC
Ala
>WENV170081906
CDZY01032638
160436
Bacteroidota
GGC
Ala
>WENV170081613
CDZY01021972
23774
Bacteroidota
GGA
Ser
>WENV170081452
CDZY01016397
258780
Bacteroidota
>WENV170081595
CDZY01020985
258780
Bacteroidota
>WENV170081706
CDZY01025105
258780
Bacteroidota
>WENV170082421
CDZY01052920
272161
Bacteroidota
CGT
Thr
>WENV170082111
CDZY01040210
162515
Bacteroidota
GAT
Ile
>WENV170081662
CDZY01023427
371226
Bacteroidota
CCT
Arg
>WENV170081357
CDZY01012909
182139
Bacteroidota
CGG
Pro
>WENV170082507
CDZY01056329
139254
Bacteroidota
GAC
Val
>WENV170082467
CDZY01054654
259292
Bacteroidota
CGT
Thr
>WENV170081270
CDZY01010877
76307
Bacteroidota
GAG
Leu
>WENV170081275
CDZY01010877
76307
Bacteroidota
GAG
Leu
>WENV170081472
CDZY01017298
76307
Bacteroidota
GAG
Leu
>WENV170081772
CDZY01027747
261339
Bacteroidota
CCA
Trp
>WENV170081201
CDZY01008728
261419
Bacteroidota
CGG
Pro
>WENV170081771
CDZY01027747
261338
Bacteroidota
GTT
Asn
>WENV170082413
CDZY01052863
452097
Bacteroidota
CTG
Gln
>WENV170081559
CDZY01019809
24636
Bacteroidota
GGA
Ser
>WENV170081043
CDZY01001904
374505
Bacteroidota
CTC
Glu
>WENV170081674
CDZY01023822
374505
Bacteroidota
CTC
Glu
>WENV170081155
CDZY01006933
154165
Bacteroidota
GGG
Pro
>WENV170082487
CDZY01055501
154165
Bacteroidota
GGG
Pro
>WENV170082553
CDZY01058258
154165
Bacteroidota
GGG
Pro
>WENV170081509
CDZY01018270
159918
Bacteroidota
GTG
His
>WENV170081051
CDZY01002364
124700
Bacteroidota
>WENV170081054
CDZY01002364
124700
Bacteroidota
>WENV170081642
CDZY01023350
124700
Bacteroidota
>WENV170081645
CDZY01023350
124700
Bacteroidota
>WENV170081648
CDZY01023350
124700
Bacteroidota
>WENV170081650
CDZY01023350
124700
Bacteroidota
>WENV170082167
CDZY01042105
120345
Bacteroidota
TAG
Leu
>WENV170081211
CDZY01009363
238847
Bacteroidota
GGC
Ala
>WENV170082363
CDZY01050999
370133
Bacteroidota
CCG
Arg
>WENV170082547
CDZY01058222
449098
Bacteroidota
>WENV170081328
CDZY01011845
105470
Bacteroidota
TAG
Leu
>WENV170081231
CDZY01009876
236821
Bacteroidota
>WENV170081768
CDZY01027669
236821
Bacteroidota
>WENV170081850
CDZY01030763
52815
Bacteroidota
TAA
Leu
>WENV170082374
CDZY01051454
322169
Bacteroidota
CCA
Trp
>WENV170081332
CDZY01012329
259289
Bacteroidota
CTC
Glu
>WENV170081148
CDZY01006738
261420
Bacteroidota
ACG
Arg
>WENV170082371
CDZY01051393
261333
Bacteroidota
CCC
Gly
>WENV170082518
CDZY01056750
106801
Bacteroidota
CAG
Leu
>WENV170081416
CDZY01015152
24628
Bacteroidota
GGA
Ser
>WENV170082534
CDZY01057287
24628
Bacteroidota
GGA
Ser
>WENV170081052
CDZY01002364
65114
Bacteroidota
GAG
Leu
>WENV170081055
CDZY01002364
65114
Bacteroidota
GAG
Leu
>WENV170081643
CDZY01023350
65114
Bacteroidota
GAG
Leu
>WENV170081646
CDZY01023350
65114
Bacteroidota
GAG
Leu
>WENV170081916
CDZY01033098
322951
Bacteroidota
TTT
Lys
>WENV170082343
CDZY01049643
322951
Bacteroidota
TTT
Lys
>WENV170081342
CDZY01012358
71334
Bacteroidota
GAG
Leu
>WENV170081991
CDZY01034967
22799
Bacteroidota
GGA
Ser
>WENV170082188
CDZY01043065
22799
Bacteroidota
GGA
Ser
>WENV170082546
CDZY01058222
371248
Bacteroidota
GTT
Asn
>WENV170082360
CDZY01050999
159953
Bacteroidota
CAT
Met
>WENV170082361
CDZY01050999
159953
Bacteroidota
CAT
Met
>WENV170082373
CDZY01051414
448605
Bacteroidota
CTG
Gln
>WENV170081602
CDZY01021196
259272
Bacteroidota
CGT
Thr
>WENV170081107
CDZY01004261
258386
Bacteroidota
TTT
Lys
>WENV170081425
CDZY01015155
160434
Bacteroidota
GTG
His
>WENV170081760
CDZY01026944
160417
Bacteroidota
GGC
Ala
>WENV170082269
CDZY01045749
166971
Bacteroidota
>WENV170082288
CDZY01046675
449090
Bacteroidota
CTG
Gln
>WENV170082410
CDZY01052863
307992
Bacteroidota
GAA
Phe
>WENV170082439
CDZY01053354
24259
Bacteroidota
GGA
Ser
>WENV170081100
CDZY01004197
58386
Bacteroidota
TGA
Ser
>WENV170081424
CDZY01015155
58386
Bacteroidota
TGA
Ser
>WENV170082219
CDZY01044796
58386
Bacteroidota
TGA
Ser
>WENV170082225
CDZY01044798
58386
Bacteroidota
TGA
Ser
>WENV170082277
CDZY01046211
58386
Bacteroidota
TGA
Ser
>WENV170081106
CDZY01004204
139253
Bacteroidota
GGG
Pro
>WENV170080996
CDZY01000057
65115
Bacteroidota
GAG
Leu
>WENV170080999
CDZY01000057
65115
Bacteroidota
GAG
Leu
>WENV170082076
CDZY01037328
65115
Bacteroidota
GAG
Leu
>WENV170082079
CDZY01037328
65115
Bacteroidota
GAG
Leu
>WENV170081229
CDZY01009828
414074
Bacteroidota
>WENV170082158
CDZY01041689
293859
Bacteroidota
CCA
Trp
>WENV170081973
CDZY01034114
193541
Bacteroidota
GTT
Asn
>WENV170081974
CDZY01034114
193541
Bacteroidota
GTT
Asn
>WENV170081975
CDZY01034114
193541
Bacteroidota
GTT
Asn
>WENV170082072
CDZY01037322
193541
Bacteroidota
GTT
Asn
>WENV170082073
CDZY01037322
193541
Bacteroidota
GTT
Asn
>WENV170081621
CDZY01022115
160459
Bacteroidota
GGC
Ala
>WENV170081856
CDZY01031223
448601
Bacteroidota
TTG
Gln
>WENV170082544
CDZY01058222
41432
Bacteroidota
TAA
Leu
>WENV170082538
CDZY01057692
324834
Bacteroidota
CCC
Gly
>WENV170082112
CDZY01040210
162516
Bacteroidota
TGC
Ala
>WENV170081830
CDZY01029512
370351
Bacteroidota
CCT
Arg
>WENV170081790
CDZY01028317
160435
Bacteroidota
GGC
Ala
>WENV170082552
CDZY01058258
469658
Bacteroidota
CTG
Gln
>WENV170082548
CDZY01058222
261369
Bacteroidota
GTC
Asp
>WENV170082468
CDZY01054655
410456
Bacteroidota
CCC
Gly
>WENV170081383
CDZY01013796
105282
Bacteroidota
TAG
Leu
>WENV170081801
CDZY01028632
278748
Bacteroidota
CCC
Gly
>WENV170081784
CDZY01028214
261340
Bacteroidota
CTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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