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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
92 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170081451
CDZY01016397
235097
Bacteroidota
TTT
Lys
>WENV170082488
CDZY01055501
235097
Bacteroidota
TTT
Lys
>WENV170082467
CDZY01054654
235102
Bacteroidota
CGT
Thr
>WENV170081357
CDZY01012909
144657
Bacteroidota
CGG
Pro
>WENV170082032
CDZY01036348
243025
Bacteroidota
CAT
Met
>WENV170081043
CDZY01001904
338155
Bacteroidota
CTC
Glu
>WENV170081674
CDZY01023822
338155
Bacteroidota
CTC
Glu
>WENV170082111
CDZY01040210
153993
Bacteroidota
GAT
Ile
>WENV170081342
CDZY01012358
58715
Bacteroidota
GAG
Leu
>WENV170081038
CDZY01001894
17323
Bacteroidota
GGA
Ser
>WENV170081229
CDZY01009828
338486
Bacteroidota
CAT
Met
>WENV170082552
CDZY01058258
411543
Bacteroidota
CTG
Gln
>WENV170082169
CDZY01042105
436206
Bacteroidota
TTG
Gln
>WENV170081461
CDZY01016875
436206
Bacteroidota
TTG
Gln
>WENV170081442
CDZY01016013
436206
Bacteroidota
TTG
Gln
>WENV170081107
CDZY01004261
237247
Bacteroidota
TTT
Lys
>WENV170082363
CDZY01050999
338124
Bacteroidota
CCG
Arg
>WENV170082465
CDZY01054311
126641
Bacteroidota
TAC
Val
>WENV170082464
CDZY01054311
126641
Bacteroidota
TAC
Val
>WENV170081510
CDZY01018270
338132
Bacteroidota
GCA
Cys
>WENV170081498
CDZY01018257
338132
Bacteroidota
GCA
Cys
>WENV170081330
CDZY01012329
338132
Bacteroidota
GCA
Cys
>WENV170081523
CDZY01018695
338132
Bacteroidota
GCA
Cys
>WENV170082361
CDZY01050999
193809
Bacteroidota
CAT
Met
>WENV170082360
CDZY01050999
193809
Bacteroidota
CAT
Met
>WENV170082350
CDZY01050569
301449
Bacteroidota
CGG
Pro
>WENV170082286
CDZY01046671
301449
Bacteroidota
CGG
Pro
>WENV170082204
CDZY01043606
301449
Bacteroidota
CGG
Pro
>WENV170082070
CDZY01037322
301449
Bacteroidota
CGG
Pro
>WENV170081897
CDZY01032207
301449
Bacteroidota
CGG
Pro
>WENV170081894
CDZY01032200
301449
Bacteroidota
CGG
Pro
>WENV170082047
CDZY01036750
144933
Bacteroidota
TCT
Arg
>WENV170082344
CDZY01049645
144933
Bacteroidota
TCT
Arg
>WENV170082553
CDZY01058258
141414
Bacteroidota
GGG
Pro
>WENV170082487
CDZY01055501
141414
Bacteroidota
GGG
Pro
>WENV170081155
CDZY01006933
141414
Bacteroidota
GGG
Pro
>WENV170081425
CDZY01015155
144656
Bacteroidota
GTG
His
>WENV170081706
CDZY01025105
235207
Bacteroidota
CAT
Met
>WENV170081595
CDZY01020985
235207
Bacteroidota
CAT
Met
>WENV170081452
CDZY01016397
235207
Bacteroidota
CAT
Met
>WENV170081621
CDZY01022115
144596
Bacteroidota
GGC
Ala
>WENV170082067
CDZY01037322
80607
Bacteroidota
GTA
Tyr
>WENV170081629
CDZY01022862
80607
Bacteroidota
GTA
Tyr
>WENV170081488
CDZY01017748
80607
Bacteroidota
GTA
Tyr
>WENV170081160
CDZY01007280
80607
Bacteroidota
GTA
Tyr
>WENV170081150
CDZY01006919
80607
Bacteroidota
GTA
Tyr
>WENV170081076
CDZY01003312
80607
Bacteroidota
GTA
Tyr
>WENV170081051
CDZY01002364
113604
Bacteroidota
>WENV170081650
CDZY01023350
113604
Bacteroidota
>WENV170081648
CDZY01023350
113604
Bacteroidota
>WENV170081645
CDZY01023350
113604
Bacteroidota
>WENV170081642
CDZY01023350
113604
Bacteroidota
>WENV170081054
CDZY01002364
113604
Bacteroidota
>WENV170081613
CDZY01021972
16999
Bacteroidota
GGA
Ser
>WENV170082269
CDZY01045749
154643
Bacteroidota
CAT
Met
>WENV170082073
CDZY01037322
144590
Bacteroidota
GTT
Asn
>WENV170082072
CDZY01037322
144590
Bacteroidota
GTT
Asn
>WENV170081975
CDZY01034114
144590
Bacteroidota
GTT
Asn
>WENV170081974
CDZY01034114
144590
Bacteroidota
GTT
Asn
>WENV170081973
CDZY01034114
144590
Bacteroidota
GTT
Asn
>WENV170081328
CDZY01011845
95559
Bacteroidota
TAG
Leu
>WENV170081790
CDZY01028317
144655
Bacteroidota
GGC
Ala
>WENV170081383
CDZY01013796
95875
Bacteroidota
TAG
Leu
>WENV170081830
CDZY01029512
338314
Bacteroidota
CCT
Arg
>WENV170081850
CDZY01030763
44852
Bacteroidota
TAA
Leu
>WENV170081489
CDZY01017748
338165
Bacteroidota
GGT
Thr
>WENV170081077
CDZY01003312
338165
Bacteroidota
GGT
Thr
>WENV170082439
CDZY01053354
19528
Bacteroidota
GGA
Ser
>WENV170081802
CDZY01028691
425638
Bacteroidota
CTG
Gln
>WENV170081096
CDZY01003765
425638
Bacteroidota
CTG
Gln
>WENV170081026
CDZY01001381
425638
Bacteroidota
CTG
Gln
>WENV170082278
CDZY01046211
19317
Bacteroidota
GGA
Ser
>WENV170082273
CDZY01045749
353927
Bacteroidota
TTC
Glu
>WENV170081493
CDZY01017753
185921
Bacteroidota
GTC
Asp
>WENV170081042
CDZY01001904
23696
Bacteroidota
GCT
Ser
>WENV170082413
CDZY01052863
414426
Bacteroidota
CTG
Gln
>WENV170082277
CDZY01046211
56823
Bacteroidota
TGA
Ser
>WENV170082225
CDZY01044798
56823
Bacteroidota
TGA
Ser
>WENV170082219
CDZY01044796
56823
Bacteroidota
TGA
Ser
>WENV170081424
CDZY01015155
56823
Bacteroidota
TGA
Ser
>WENV170081100
CDZY01004197
56823
Bacteroidota
TGA
Ser
>WENV170082490
CDZY01055861
48914
Bacteroidota
TGA
Ser
>WENV170082188
CDZY01043065
16224
Bacteroidota
GGA
Ser
>WENV170081991
CDZY01034967
16224
Bacteroidota
GGA
Ser
>WENV170081130
CDZY01005537
16220
Bacteroidota
GGA
Ser
>WENV170082114
CDZY01040276
338125
Bacteroidota
CCT
Arg
>WENV170081866
CDZY01031699
338125
Bacteroidota
CCT
Arg
>WENV170081563
CDZY01020105
338125
Bacteroidota
CCT
Arg
>WENV170081348
CDZY01012822
338125
Bacteroidota
CCT
Arg
>WENV170082441
CDZY01053408
235129
Bacteroidota
GCC
Gly
>WENV170082094
CDZY01037815
235129
Bacteroidota
GCC
Gly
>WENV170081868
CDZY01031703
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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