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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170081412
CDZY01014780
261182
Betaproteobacteria
GTT
Asn
>WENV170082137
CDZY01040771
229042
Betaproteobacteria
GAT
Ile
>WENV170081167
CDZY01007422
105910
Betaproteobacteria
GAG
Leu
>WENV170082318
CDZY01048376
105910
Betaproteobacteria
GAG
Leu
>WENV170082320
CDZY01048376
105910
Betaproteobacteria
GAG
Leu
>WENV170082322
CDZY01048376
105910
Betaproteobacteria
GAG
Leu
>WENV170082324
CDZY01048376
105910
Betaproteobacteria
GAG
Leu
>WENV170082326
CDZY01048376
105910
Betaproteobacteria
GAG
Leu
>WENV170082328
CDZY01048376
105910
Betaproteobacteria
GAG
Leu
>WENV170082358
CDZY01050985
18617
Betaproteobacteria
CGA
Ser
>WENV170081411
CDZY01014780
282838
Betaproteobacteria
GTT
Asn
>WENV170082317
CDZY01048376
371157
Betaproteobacteria
CCC
Gly
>WENV170081608
CDZY01021453
162308
Betaproteobacteria
ACG
Arg
>WENV170081610
CDZY01021453
162308
Betaproteobacteria
ACG
Arg
>WENV170081611
CDZY01021453
162308
Betaproteobacteria
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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