This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
182 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170085988
CEAB01071135
257966
Bacillota
CCA
Trp
>WENV170084689
CEAB01025487
271702
Bacillota
TGT
Thr
>WENV170084433
CEAB01015992
257969
Bacillota
TAC
Val
>WENV170085455
CEAB01050338
257969
Bacillota
TAC
Val
>WENV170085780
CEAB01062992
257969
Bacillota
TAC
Val
>WENV170084469
CEAB01016682
270088
Bacillota
CGT
Thr
>WENV170085802
CEAB01063856
172175
Bacillota
GAC
Val
>WENV170084516
CEAB01019525
159235
Bacillota
GTC
Asp
>WENV170084757
CEAB01028066
159235
Bacillota
GTC
Asp
>WENV170084759
CEAB01028066
159235
Bacillota
GTC
Asp
>WENV170084767
CEAB01028172
159235
Bacillota
GTC
Asp
>WENV170085456
CEAB01050338
159235
Bacillota
GTC
Asp
>WENV170085781
CEAB01062992
159235
Bacillota
GTC
Asp
>WENV170085962
CEAB01069928
159235
Bacillota
GTC
Asp
>WENV170084830
CEAB01030529
159247
Bacillota
>WENV170085039
CEAB01037240
19350
Bacillota
GCT
Ser
>WENV170084913
CEAB01034143
261391
Bacillota
GTT
Asn
>WENV170084946
CEAB01035092
261391
Bacillota
GTT
Asn
>WENV170085115
CEAB01039795
162485
Bacillota
CAT
Met
>WENV170085779
CEAB01062992
257968
Bacillota
GCC
Gly
>WENV170085783
CEAB01062992
257968
Bacillota
GCC
Gly
>WENV170084432
CEAB01015992
257968
Bacillota
GCC
Gly
>WENV170084758
CEAB01028066
257968
Bacillota
GCC
Gly
>WENV170084760
CEAB01028066
257968
Bacillota
GCC
Gly
>WENV170084974
CEAB01035855
257968
Bacillota
GCC
Gly
>WENV170085458
CEAB01050338
257968
Bacillota
GCC
Gly
>WENV170085708
CEAB01060892
257968
Bacillota
GCC
Gly
>WENV170085835
CEAB01065253
378043
Bacillota
>WENV170084131
CEAB01004189
88717
Bacillota
GTA
Tyr
>WENV170084411
CEAB01015339
88717
Bacillota
GTA
Tyr
>WENV170084558
CEAB01020360
88717
Bacillota
GTA
Tyr
>WENV170085248
CEAB01043468
369774
Bacillota
GGT
Thr
>WENV170084554
CEAB01020325
369809
Bacillota
CTC
Glu
>WENV170085766
CEAB01062695
369809
Bacillota
CTC
Glu
>WENV170084078
CEAB01002391
182782
Bacillota
ACG
Arg
>WENV170084079
CEAB01002391
182782
Bacillota
ACG
Arg
>WENV170084973
CEAB01035855
257970
Bacillota
GAA
Phe
>WENV170085457
CEAB01050338
257970
Bacillota
GAA
Phe
>WENV170085782
CEAB01062992
257970
Bacillota
GAA
Phe
>WENV170086194
CEAB01076271
257963
Bacillota
>WENV170084940
CEAB01034750
393129
Bacillota
CTC
Glu
>WENV170084941
CEAB01034750
393129
Bacillota
CTC
Glu
>WENV170084942
CEAB01034750
393129
Bacillota
CTC
Glu
>WENV170085348
CEAB01047101
393129
Bacillota
CTC
Glu
>WENV170085349
CEAB01047101
393129
Bacillota
CTC
Glu
>WENV170084515
CEAB01019525
319387
Bacillota
CCA
Trp
>WENV170085610
CEAB01056155
270601
Bacillota
TTT
Lys
>WENV170085134
CEAB01040464
159242
Bacillota
CCG
Arg
>WENV170085370
CEAB01047842
159242
Bacillota
CCG
Arg
>WENV170085893
CEAB01068062
159242
Bacillota
CCG
Arg
>WENV170086163
CEAB01075668
159242
Bacillota
CCG
Arg
>WENV170084110
CEAB01003789
257972
Bacillota
CGG
Pro
>WENV170085044
CEAB01037603
257972
Bacillota
CGG
Pro
>WENV170085375
CEAB01048241
257972
Bacillota
CGG
Pro
>WENV170086199
CEAB01077021
257972
Bacillota
CGG
Pro
>WENV170084248
CEAB01008403
64854
Bacillota
TAA
Leu
>WENV170085685
CEAB01059798
124618
Bacillota
GAG
Leu
>WENV170084769
CEAB01028212
259283
Bacillota
CGT
Thr
>WENV170084405
CEAB01014928
451223
Bacillota
GCA
Cys
>WENV170084052
CEAB01000876
449103
Bacillota
GCA
Cys
>WENV170085622
CEAB01056646
286917
Bacillota
TGC
Ala
>WENV170084048
CEAB01000743
448255
Bacillota
CTG
Gln
>WENV170084109
CEAB01003789
448255
Bacillota
CTG
Gln
>WENV170084774
CEAB01028583
448255
Bacillota
CTG
Gln
>WENV170085043
CEAB01037603
448255
Bacillota
CTG
Gln
>WENV170085072
CEAB01038549
448255
Bacillota
CTG
Gln
>WENV170085074
CEAB01038553
448255
Bacillota
CTG
Gln
>WENV170085340
CEAB01047079
448255
Bacillota
CTG
Gln
>WENV170085374
CEAB01048241
448255
Bacillota
CTG
Gln
>WENV170085666
CEAB01059027
448255
Bacillota
CTG
Gln
>WENV170084089
CEAB01002467
159234
Bacillota
CAC
Val
>WENV170085059
CEAB01038038
159234
Bacillota
CAC
Val
>WENV170085503
CEAB01051809
159234
Bacillota
CAC
Val
>WENV170085567
CEAB01054955
159234
Bacillota
CAC
Val
>WENV170085794
CEAB01063703
159234
Bacillota
CAC
Val
>WENV170086198
CEAB01076897
159234
Bacillota
CAC
Val
>WENV170085181
CEAB01041210
268270
Bacillota
CGT
Thr
>WENV170084329
CEAB01011287
162688
Bacillota
GAT
Ile
>WENV170084781
CEAB01029159
162688
Bacillota
GAT
Ile
>WENV170085437
CEAB01050214
162688
Bacillota
GAT
Ile
>WENV170085807
CEAB01064385
162688
Bacillota
GAT
Ile
>WENV170084690
CEAB01025487
107867
Bacillota
GTA
Tyr
>WENV170085220
CEAB01042843
133221
Bacillota
CAA
Leu
>WENV170085642
CEAB01057911
106802
Bacillota
GTA
Tyr
>WENV170084260
CEAB01008932
159237
Bacillota
TCT
Arg
>WENV170084370
CEAB01013752
159237
Bacillota
TCT
Arg
>WENV170085219
CEAB01042843
159237
Bacillota
TCT
Arg
>WENV170085261
CEAB01044274
159237
Bacillota
TCT
Arg
>WENV170085778
CEAB01062963
159237
Bacillota
TCT
Arg
>WENV170084164
CEAB01005905
257977
Bacillota
CGT
Thr
>WENV170084721
CEAB01026823
257977
Bacillota
CGT
Thr
>WENV170085255
CEAB01044057
90522
Bacillota
CAG
Leu
>WENV170084587
CEAB01021535
374673
Bacillota
CTC
Glu
>WENV170085992
CEAB01071197
374673
Bacillota
CTC
Glu
>WENV170086091
CEAB01073778
374673
Bacillota
CTC
Glu
>WENV170086117
CEAB01074429
374673
Bacillota
CTC
Glu
>WENV170085484
CEAB01051349
105206
Bacillota
GTA
Tyr
>WENV170085686
CEAB01059798
131005
Bacillota
TAG
Leu
>WENV170084049
CEAB01000759
158271
Bacillota
CCT
Arg
>WENV170084039
CEAB01000625
369393
Bacillota
TTC
Glu
>WENV170084462
CEAB01016651
369393
Bacillota
TTC
Glu
>WENV170084893
CEAB01033024
369393
Bacillota
TTC
Glu
>WENV170084992
CEAB01036017
293959
Bacillota
GGC
Ala
>WENV170084993
CEAB01036017
293959
Bacillota
GGC
Ala
>WENV170085717
CEAB01060997
293959
Bacillota
GGC
Ala
>WENV170084091
CEAB01002647
64857
Bacillota
TAA
Leu
>WENV170084539
CEAB01020265
64857
Bacillota
TAA
Leu
>WENV170085815
CEAB01064587
233867
Bacillota
CAT
Met
>WENV170084958
CEAB01035331
56553
Bacillota
CAG
Leu
>WENV170085399
CEAB01048886
56553
Bacillota
CAG
Leu
>WENV170084073
CEAB01001765
186428
Bacillota
TCT
Arg
>WENV170084255
CEAB01008483
369390
Bacillota
TGT
Thr
>WENV170084385
CEAB01014287
369390
Bacillota
TGT
Thr
>WENV170086109
CEAB01073920
369390
Bacillota
TGT
Thr
>WENV170086197
CEAB01076774
369390
Bacillota
TGT
Thr
>WENV170084086
CEAB01002400
11993
Bacillota
GGA
Ser
>WENV170084459
CEAB01016612
11993
Bacillota
GGA
Ser
>WENV170085789
CEAB01063344
11993
Bacillota
GGA
Ser
>WENV170085790
CEAB01063344
11993
Bacillota
GGA
Ser
>WENV170086018
CEAB01071984
11993
Bacillota
GGA
Ser
>WENV170085728
CEAB01061506
277767
Bacillota
CGC
Ala
>WENV170085688
CEAB01060329
64856
Bacillota
CAA
Leu
>WENV170085006
CEAB01036627
131055
Bacillota
TAG
Leu
>WENV170084139
CEAB01004685
49796
Bacillota
TGA
Ser
>WENV170084848
CEAB01031124
49796
Bacillota
TGA
Ser
>WENV170085338
CEAB01047001
49796
Bacillota
TGA
Ser
>WENV170085679
CEAB01059635
49796
Bacillota
TGA
Ser
>WENV170085880
CEAB01067569
49796
Bacillota
TGA
Ser
>WENV170084831
CEAB01030534
261393
Bacillota
CGT
Thr
>WENV170086164
CEAB01075820
261393
Bacillota
CGT
Thr
>WENV170085184
CEAB01041607
159344
Bacillota
>WENV170084880
CEAB01032795
5393
Bacillota
GCT
Ser
>WENV170085339
CEAB01047001
5393
Bacillota
GCT
Ser
>WENV170085881
CEAB01067569
5393
Bacillota
GCT
Ser
>WENV170085488
CEAB01051448
162605
Bacillota
CCT
Arg
>WENV170085901
CEAB01068553
448256
Bacillota
TTG
Gln
>WENV170084514
CEAB01019176
448256
Bacillota
TTG
Gln
>WENV170085655
CEAB01058452
448256
Bacillota
TTG
Gln
>WENV170084771
CEAB01028388
167205
Bacillota
TAC
Val
>WENV170084884
CEAB01032903
167205
Bacillota
TAC
Val
>WENV170085298
CEAB01045883
167205
Bacillota
TAC
Val
>WENV170085947
CEAB01068891
449102
Bacillota
CCA
Trp
>WENV170084215
CEAB01007252
257960
Bacillota
CGC
Ala
>WENV170085297
CEAB01045882
18326
Bacillota
CGA
Ser
>WENV170084552
CEAB01020312
312418
Bacillota
GAA
Phe
>WENV170086126
CEAB01074532
166295
Bacillota
GTT
Asn
>WENV170084949
CEAB01035289
159236
Bacillota
GTT
Asn
>WENV170084978
CEAB01035907
159236
Bacillota
GTT
Asn
>WENV170085032
CEAB01037143
159236
Bacillota
GTT
Asn
>WENV170085377
CEAB01048266
159236
Bacillota
GTT
Asn
>WENV170085631
CEAB01057294
159236
Bacillota
GTT
Asn
>WENV170085828
CEAB01065056
159236
Bacillota
GTT
Asn
>WENV170085987
CEAB01071035
159236
Bacillota
GTT
Asn
>WENV170084223
CEAB01007539
257976
Bacillota
CCC
Gly
>WENV170084410
CEAB01015318
257976
Bacillota
CCC
Gly
>WENV170085623
CEAB01056692
257976
Bacillota
CCC
Gly
>WENV170084998
CEAB01036069
172176
Bacillota
TGG
Pro
>WENV170085397
CEAB01048486
375901
Bacillota
CCG
Arg
>WENV170085641
CEAB01057911
258131
Bacillota
TGT
Thr
>WENV170085999
CEAB01071735
258131
Bacillota
TGT
Thr
>WENV170084070
CEAB01001646
369392
Bacillota
GCA
Cys
>WENV170084761
CEAB01028066
369392
Bacillota
GCA
Cys
>WENV170085568
CEAB01054960
292274
Bacillota
TTT
Lys
>WENV170084862
CEAB01032205
257965
Bacillota
TGG
Pro
>WENV170085049
CEAB01037843
257965
Bacillota
TGG
Pro
>WENV170085722
CEAB01061498
257965
Bacillota
TGG
Pro
>WENV170086065
CEAB01073149
257965
Bacillota
TGG
Pro
>WENV170084075
CEAB01002248
64855
Bacillota
CAG
Leu
>WENV170084491
CEAB01017860
64855
Bacillota
CAG
Leu
>WENV170084791
CEAB01029329
64855
Bacillota
CAG
Leu
>WENV170085080
CEAB01038733
64855
Bacillota
CAG
Leu
>WENV170085665
CEAB01059014
64855
Bacillota
CAG
Leu
>WENV170086108
CEAB01073846
64855
Bacillota
CAG
Leu
>WENV170084707
CEAB01025794
105955
Bacillota
TAG
Leu
>WENV170084261
CEAB01008932
159238
Bacillota
GTG
His
>WENV170084371
CEAB01013752
159238
Bacillota
GTG
His
>WENV170085262
CEAB01044274
159238
Bacillota
GTG
His
>WENV170085720
CEAB01061196
159238
Bacillota
GTG
His
>WENV170084107
CEAB01003720
369391
Bacillota
TCC
Gly
>WENV170084204
CEAB01007116
369391
Bacillota
TCC
Gly
>WENV170085718
CEAB01060997
369391
Bacillota
TCC
Gly
>WENV170085775
CEAB01062778
131078
Bacillota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK