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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
247 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170085746
CEAB01062133
152201
Bacteroidota
TAC
Val
>WENV170085747
CEAB01062133
152201
Bacteroidota
TAC
Val
>WENV170085748
CEAB01062133
152201
Bacteroidota
TAC
Val
>WENV170085939
CEAB01068816
152201
Bacteroidota
TAC
Val
>WENV170086122
CEAB01074446
105959
Bacteroidota
TAG
Leu
>WENV170084928
CEAB01034666
261421
Bacteroidota
CCA
Trp
>WENV170084817
CEAB01030463
159893
Bacteroidota
TCT
Arg
>WENV170084906
CEAB01033944
65502
Bacteroidota
CAA
Leu
>WENV170085494
CEAB01051504
65502
Bacteroidota
CAA
Leu
>WENV170085684
CEAB01059756
65502
Bacteroidota
CAA
Leu
>WENV170085280
CEAB01045148
166871
Bacteroidota
TCT
Arg
>WENV170085159
CEAB01041096
369487
Bacteroidota
>WENV170084090
CEAB01002479
369838
Bacteroidota
CCT
Arg
>WENV170084226
CEAB01007851
369838
Bacteroidota
CCT
Arg
>WENV170084888
CEAB01032908
236813
Bacteroidota
GTC
Asp
>WENV170085331
CEAB01046552
448691
Bacteroidota
TTG
Gln
>WENV170085860
CEAB01066890
448691
Bacteroidota
TTG
Gln
>WENV170084685
CEAB01025132
160436
Bacteroidota
GGC
Ala
>WENV170085070
CEAB01038533
160436
Bacteroidota
GGC
Ala
>WENV170084099
CEAB01003108
23774
Bacteroidota
GGA
Ser
>WENV170085369
CEAB01047813
23774
Bacteroidota
GGA
Ser
>WENV170085411
CEAB01049622
23774
Bacteroidota
GGA
Ser
>WENV170086121
CEAB01074436
23774
Bacteroidota
GGA
Ser
>WENV170084600
CEAB01022110
18458
Bacteroidota
GGA
Ser
>WENV170084158
CEAB01005762
258780
Bacteroidota
>WENV170084393
CEAB01014347
258780
Bacteroidota
>WENV170084485
CEAB01017779
258780
Bacteroidota
>WENV170084561
CEAB01020858
258780
Bacteroidota
>WENV170085480
CEAB01050976
258780
Bacteroidota
>WENV170084703
CEAB01025667
160416
Bacteroidota
GTG
His
>WENV170084711
CEAB01026264
160416
Bacteroidota
GTG
His
>WENV170084412
CEAB01015351
272161
Bacteroidota
CGT
Thr
>WENV170084765
CEAB01028157
258777
Bacteroidota
GAA
Phe
>WENV170084899
CEAB01033490
258777
Bacteroidota
GAA
Phe
>WENV170084335
CEAB01011576
65110
Bacteroidota
CAG
Leu
>WENV170084844
CEAB01031020
65110
Bacteroidota
CAG
Leu
>WENV170084983
CEAB01035968
65110
Bacteroidota
CAG
Leu
>WENV170085241
CEAB01043313
49944
Bacteroidota
TAA
Leu
>WENV170085616
CEAB01056389
49944
Bacteroidota
TAA
Leu
>WENV170084577
CEAB01021399
371226
Bacteroidota
CCT
Arg
>WENV170085699
CEAB01060430
182139
Bacteroidota
CGG
Pro
>WENV170085851
CEAB01066330
182139
Bacteroidota
CGG
Pro
>WENV170084508
CEAB01019004
139254
Bacteroidota
GAC
Val
>WENV170085143
CEAB01040947
139254
Bacteroidota
GAC
Val
>WENV170085373
CEAB01048187
139254
Bacteroidota
GAC
Val
>WENV170084809
CEAB01029860
105701
Bacteroidota
TAG
Leu
>WENV170084290
CEAB01009676
38349
Bacteroidota
CGA
Ser
>WENV170084276
CEAB01009112
259292
Bacteroidota
CGT
Thr
>WENV170085254
CEAB01044030
259292
Bacteroidota
CGT
Thr
>WENV170084214
CEAB01007241
65111
Bacteroidota
CAA
Leu
>WENV170084065
CEAB01001302
26362
Bacteroidota
GCT
Ser
>WENV170084176
CEAB01006576
26362
Bacteroidota
GCT
Ser
>WENV170086142
CEAB01075072
76307
Bacteroidota
GAG
Leu
>WENV170085636
CEAB01057582
449113
Bacteroidota
GCA
Cys
>WENV170086155
CEAB01075589
261339
Bacteroidota
CCA
Trp
>WENV170086158
CEAB01075589
105937
Bacteroidota
GTA
Tyr
>WENV170084155
CEAB01005328
261419
Bacteroidota
CGG
Pro
>WENV170084926
CEAB01034204
261419
Bacteroidota
CGG
Pro
>WENV170084489
CEAB01017796
65517
Bacteroidota
CAG
Leu
>WENV170084822
CEAB01030473
50713
Bacteroidota
TGA
Ser
>WENV170084700
CEAB01025664
162517
Bacteroidota
GTT
Asn
>WENV170084701
CEAB01025664
162517
Bacteroidota
GTT
Asn
>WENV170084702
CEAB01025664
162517
Bacteroidota
GTT
Asn
>WENV170085062
CEAB01038061
162517
Bacteroidota
GTT
Asn
>WENV170086154
CEAB01075589
261338
Bacteroidota
GTT
Asn
>WENV170085040
CEAB01037244
159589
Bacteroidota
>WENV170084272
CEAB01009059
452097
Bacteroidota
CTG
Gln
>WENV170084317
CEAB01010699
24636
Bacteroidota
GGA
Ser
>WENV170084560
CEAB01020832
24636
Bacteroidota
GGA
Ser
>WENV170084359
CEAB01013055
374505
Bacteroidota
CTC
Glu
>WENV170085046
CEAB01037729
374505
Bacteroidota
CTC
Glu
>WENV170085160
CEAB01041096
159413
Bacteroidota
>WENV170085161
CEAB01041096
159413
Bacteroidota
>WENV170084524
CEAB01019656
124700
Bacteroidota
>WENV170084527
CEAB01019656
124700
Bacteroidota
>WENV170084634
CEAB01023884
124700
Bacteroidota
>WENV170085033
CEAB01037188
124700
Bacteroidota
>WENV170085035
CEAB01037188
124700
Bacteroidota
>WENV170086176
CEAB01076180
124700
Bacteroidota
>WENV170086179
CEAB01076180
124700
Bacteroidota
>WENV170086182
CEAB01076180
124700
Bacteroidota
>WENV170086203
CEAB01077222
124700
Bacteroidota
>WENV170086205
CEAB01077222
124700
Bacteroidota
>WENV170084532
CEAB01019660
161250
Bacteroidota
GTT
Asn
>WENV170084533
CEAB01019660
161250
Bacteroidota
GTT
Asn
>WENV170084534
CEAB01019660
161250
Bacteroidota
GTT
Asn
>WENV170084838
CEAB01031015
161250
Bacteroidota
GTT
Asn
>WENV170084839
CEAB01031015
161250
Bacteroidota
GTT
Asn
>WENV170084840
CEAB01031015
161250
Bacteroidota
GTT
Asn
>WENV170084841
CEAB01031015
161250
Bacteroidota
GTT
Asn
>WENV170084842
CEAB01031015
161250
Bacteroidota
GTT
Asn
>WENV170085698
CEAB01060379
120345
Bacteroidota
TAG
Leu
>WENV170085777
CEAB01062873
238847
Bacteroidota
GGC
Ala
>WENV170084931
CEAB01034700
205503
Bacteroidota
GTG
His
>WENV170084606
CEAB01022641
370133
Bacteroidota
CCG
Arg
>WENV170085438
CEAB01050232
370133
Bacteroidota
CCG
Arg
>WENV170085534
CEAB01053240
370133
Bacteroidota
CCG
Arg
>WENV170084509
CEAB01019005
63141
Bacteroidota
TGA
Ser
>WENV170084632
CEAB01023884
63141
Bacteroidota
TGA
Ser
>WENV170085292
CEAB01045512
63141
Bacteroidota
TGA
Ser
>WENV170085469
CEAB01050892
63141
Bacteroidota
TGA
Ser
>WENV170085806
CEAB01064365
63141
Bacteroidota
TGA
Ser
>WENV170084881
CEAB01032800
105470
Bacteroidota
TAG
Leu
>WENV170085791
CEAB01063457
105470
Bacteroidota
TAG
Leu
>WENV170086167
CEAB01076123
105470
Bacteroidota
TAG
Leu
>WENV170084314
CEAB01010521
207722
Bacteroidota
GTT
Asn
>WENV170084572
CEAB01021399
207722
Bacteroidota
GTT
Asn
>WENV170084578
CEAB01021478
236821
Bacteroidota
>WENV170085276
CEAB01044579
236821
Bacteroidota
>WENV170085977
CEAB01070226
236821
Bacteroidota
>WENV170086130
CEAB01075027
236821
Bacteroidota
>WENV170084323
CEAB01010819
370665
Bacteroidota
CCG
Arg
>WENV170085560
CEAB01054419
370665
Bacteroidota
CCG
Arg
>WENV170084343
CEAB01011963
449116
Bacteroidota
CTG
Gln
>WENV170084115
CEAB01004066
322169
Bacteroidota
CCA
Trp
>WENV170085800
CEAB01063842
259289
Bacteroidota
CTC
Glu
>WENV170086079
CEAB01073486
259289
Bacteroidota
CTC
Glu
>WENV170084105
CEAB01003556
261420
Bacteroidota
ACG
Arg
>WENV170084592
CEAB01021578
261420
Bacteroidota
ACG
Arg
>WENV170084159
CEAB01005762
155049
Bacteroidota
TAC
Val
>WENV170084160
CEAB01005762
155049
Bacteroidota
TAC
Val
>WENV170084161
CEAB01005762
155049
Bacteroidota
TAC
Val
>WENV170084162
CEAB01005762
155049
Bacteroidota
TAC
Val
>WENV170084306
CEAB01010219
155049
Bacteroidota
TAC
Val
>WENV170084307
CEAB01010219
155049
Bacteroidota
TAC
Val
>WENV170084386
CEAB01014347
155049
Bacteroidota
TAC
Val
>WENV170084387
CEAB01014347
155049
Bacteroidota
TAC
Val
>WENV170084388
CEAB01014347
155049
Bacteroidota
TAC
Val
>WENV170084390
CEAB01014347
155049
Bacteroidota
TAC
Val
>WENV170084502
CEAB01018396
155049
Bacteroidota
TAC
Val
>WENV170084503
CEAB01018396
155049
Bacteroidota
TAC
Val
>WENV170084644
CEAB01024432
155049
Bacteroidota
TAC
Val
>WENV170085063
CEAB01038126
155049
Bacteroidota
TAC
Val
>WENV170085064
CEAB01038126
155049
Bacteroidota
TAC
Val
>WENV170085065
CEAB01038126
155049
Bacteroidota
TAC
Val
>WENV170085144
CEAB01041013
155049
Bacteroidota
TAC
Val
>WENV170084076
CEAB01002282
155049
Bacteroidota
TAC
Val
>WENV170085145
CEAB01041013
155049
Bacteroidota
TAC
Val
>WENV170085226
CEAB01042899
155049
Bacteroidota
TAC
Val
>WENV170085476
CEAB01050976
155049
Bacteroidota
TAC
Val
>WENV170085477
CEAB01050976
155049
Bacteroidota
TAC
Val
>WENV170085478
CEAB01050976
155049
Bacteroidota
TAC
Val
>WENV170085479
CEAB01050976
155049
Bacteroidota
TAC
Val
>WENV170085819
CEAB01064817
155049
Bacteroidota
TAC
Val
>WENV170085820
CEAB01064817
155049
Bacteroidota
TAC
Val
>WENV170085821
CEAB01064817
155049
Bacteroidota
TAC
Val
>WENV170085985
CEAB01070922
155049
Bacteroidota
TAC
Val
>WENV170085986
CEAB01070922
155049
Bacteroidota
TAC
Val
>WENV170084506
CEAB01019001
261333
Bacteroidota
CCC
Gly
>WENV170084988
CEAB01035982
261333
Bacteroidota
CCC
Gly
>WENV170084718
CEAB01026287
106801
Bacteroidota
CAG
Leu
>WENV170084525
CEAB01019656
65114
Bacteroidota
GAG
Leu
>WENV170084579
CEAB01021478
322951
Bacteroidota
TTT
Lys
>WENV170084641
CEAB01024398
322951
Bacteroidota
TTT
Lys
>WENV170085264
CEAB01044513
322951
Bacteroidota
TTT
Lys
>WENV170084816
CEAB01030423
22799
Bacteroidota
GGA
Ser
>WENV170085224
CEAB01042895
22799
Bacteroidota
GGA
Ser
>WENV170085664
CEAB01059007
22799
Bacteroidota
GGA
Ser
>WENV170084381
CEAB01014018
259271
Bacteroidota
CTT
Lys
>WENV170084382
CEAB01014018
259271
Bacteroidota
CTT
Lys
>WENV170084504
CEAB01018547
259271
Bacteroidota
CTT
Lys
>WENV170084033
CEAB01000603
276085
Bacteroidota
TTT
Lys
>WENV170084642
CEAB01024432
276085
Bacteroidota
TTT
Lys
>WENV170085894
CEAB01068162
276085
Bacteroidota
TTT
Lys
>WENV170084119
CEAB01004126
159953
Bacteroidota
CAT
Met
>WENV170084120
CEAB01004126
159953
Bacteroidota
CAT
Met
>WENV170084463
CEAB01016660
20980
Bacteroidota
GGA
Ser
>WENV170085902
CEAB01068697
20980
Bacteroidota
GGA
Ser
>WENV170085930
CEAB01068792
49817
Bacteroidota
TGA
Ser
>WENV170084417
CEAB01015422
448605
Bacteroidota
CTG
Gln
>WENV170084984
CEAB01035968
259272
Bacteroidota
CGT
Thr
>WENV170085151
CEAB01041091
259272
Bacteroidota
CGT
Thr
>WENV170085528
CEAB01052648
141365
Bacteroidota
GGG
Pro
>WENV170086156
CEAB01075589
449089
Bacteroidota
TTG
Gln
>WENV170085450
CEAB01050298
26705
Bacteroidota
GCT
Ser
>WENV170086129
CEAB01074955
26705
Bacteroidota
GCT
Ser
>WENV170084875
CEAB01032351
49945
Bacteroidota
TGA
Ser
>WENV170084300
CEAB01010216
159415
Bacteroidota
>WENV170084126
CEAB01004137
160434
Bacteroidota
GTG
His
>WENV170085223
CEAB01042895
160434
Bacteroidota
GTG
His
>WENV170085951
CEAB01069335
160434
Bacteroidota
GTG
His
>WENV170085041
CEAB01037250
160417
Bacteroidota
GGC
Ala
>WENV170084513
CEAB01019166
378278
Bacteroidota
CCT
Arg
>WENV170084785
CEAB01029257
166971
Bacteroidota
>WENV170084874
CEAB01032351
288732
Bacteroidota
CTT
Lys
>WENV170085031
CEAB01036914
371292
Bacteroidota
CCG
Arg
>WENV170085529
CEAB01052666
448600
Bacteroidota
CTG
Gln
>WENV170086002
CEAB01071844
449090
Bacteroidota
CTG
Gln
>WENV170086003
CEAB01071844
449090
Bacteroidota
CTG
Gln
>WENV170086004
CEAB01071844
449090
Bacteroidota
CTG
Gln
>WENV170084273
CEAB01009059
307992
Bacteroidota
GAA
Phe
>WENV170084367
CEAB01013616
24259
Bacteroidota
GGA
Ser
>WENV170084985
CEAB01035970
261335
Bacteroidota
TTT
Lys
>WENV170085669
CEAB01059106
261335
Bacteroidota
TTT
Lys
>WENV170084627
CEAB01023338
166972
Bacteroidota
TGT
Thr
>WENV170085989
CEAB01071165
216052
Bacteroidota
TCT
Arg
>WENV170084726
CEAB01026917
139253
Bacteroidota
GGG
Pro
>WENV170084531
CEAB01019659
162594
Bacteroidota
GGC
Ala
>WENV170084207
CEAB01007234
65115
Bacteroidota
GAG
Leu
>WENV170084210
CEAB01007234
65115
Bacteroidota
GAG
Leu
>WENV170086193
CEAB01076181
162567
Bacteroidota
>WENV170085676
CEAB01059220
90587
Bacteroidota
TAG
Leu
>WENV170084396
CEAB01014361
414074
Bacteroidota
>WENV170084688
CEAB01025236
414074
Bacteroidota
>WENV170085797
CEAB01063838
414074
Bacteroidota
>WENV170085961
CEAB01069736
414074
Bacteroidota
>WENV170086153
CEAB01075589
261337
Bacteroidota
>WENV170085857
CEAB01066811
293859
Bacteroidota
CCA
Trp
>WENV170085009
CEAB01036638
193541
Bacteroidota
GTT
Asn
>WENV170085010
CEAB01036638
193541
Bacteroidota
GTT
Asn
>WENV170085011
CEAB01036638
193541
Bacteroidota
GTT
Asn
>WENV170085157
CEAB01041092
193541
Bacteroidota
GTT
Asn
>WENV170085158
CEAB01041092
193541
Bacteroidota
GTT
Asn
>WENV170085855
CEAB01066811
95591
Bacteroidota
GTA
Tyr
>WENV170084395
CEAB01014350
142773
Bacteroidota
TGG
Pro
>WENV170084792
CEAB01029379
160459
Bacteroidota
GGC
Ala
>WENV170085148
CEAB01041084
160459
Bacteroidota
GGC
Ala
>WENV170085552
CEAB01053849
160459
Bacteroidota
GGC
Ala
>WENV170085856
CEAB01066811
369579
Bacteroidota
GGT
Thr
>WENV170085681
CEAB01059730
160415
Bacteroidota
TCT
Arg
>WENV170084409
CEAB01015311
448601
Bacteroidota
TTG
Gln
>WENV170085197
CEAB01041640
448601
Bacteroidota
TTG
Gln
>WENV170085970
CEAB01070020
448601
Bacteroidota
TTG
Gln
>WENV170086157
CEAB01075589
371225
Bacteroidota
TTC
Glu
>WENV170084304
CEAB01010216
261432
Bacteroidota
CCA
Trp
>WENV170085471
CEAB01050892
261432
Bacteroidota
CCA
Trp
>WENV170084327
CEAB01010865
324834
Bacteroidota
CCC
Gly
>WENV170085162
CEAB01041096
113804
Bacteroidota
CAA
Leu
>WENV170084095
CEAB01002926
18452
Bacteroidota
GGA
Ser
>WENV170084799
CEAB01029854
18452
Bacteroidota
GGA
Ser
>WENV170085244
CEAB01043463
160435
Bacteroidota
GGC
Ala
>WENV170085832
CEAB01065100
160435
Bacteroidota
GGC
Ala
>WENV170084322
CEAB01010817
371314
Bacteroidota
GCA
Cys
>WENV170084465
CEAB01016671
410456
Bacteroidota
CCC
Gly
>WENV170084681
CEAB01025008
410456
Bacteroidota
CCC
Gly
>WENV170084729
CEAB01026925
414056
Bacteroidota
GGT
Thr
>WENV170084819
CEAB01030473
414056
Bacteroidota
GGT
Thr
>WENV170085166
CEAB01041103
414056
Bacteroidota
GGT
Thr
>WENV170085239
CEAB01043198
105282
Bacteroidota
TAG
Leu
>WENV170085449
CEAB01050258
105282
Bacteroidota
TAG
Leu
>WENV170085630
CEAB01057290
105282
Bacteroidota
TAG
Leu
>WENV170084615
CEAB01022773
278748
Bacteroidota
CCC
Gly
>WENV170085605
CEAB01056104
278748
Bacteroidota
CCC
Gly
>WENV170084742
CEAB01027552
28588
Bacteroidota
GCT
Ser
>WENV170084488
CEAB01017796
449117
Bacteroidota
TTG
Gln
>WENV170085152
CEAB01041091
261340
Bacteroidota
CTC
Glu
>WENV170085950
CEAB01069307
261340
Bacteroidota
CTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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