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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170085066
CEAB01038275
370534
Verrucomicrobiota
TGT
Thr
>WENV170085420
CEAB01049657
370537
Verrucomicrobiota
CCG
Arg
>WENV170084202
CEAB01006836
290976
Verrucomicrobiota
GGC
Ala
>WENV170084565
CEAB01020933
88984
Verrucomicrobiota
GTA
Tyr
>WENV170085481
CEAB01051032
65261
Verrucomicrobiota
CAG
Leu
>WENV170084849
CEAB01031265
370530
Verrucomicrobiota
TAC
Val
>WENV170086128
CEAB01074843
370526
Verrucomicrobiota
CTG
Gln
>WENV170084057
CEAB01001060
50031
Verrucomicrobiota
TGA
Ser
>WENV170084719
CEAB01026489
8030
Verrucomicrobiota
CGA
Ser
>WENV170085367
CEAB01047747
370525
Verrucomicrobiota
TTG
Gln
>WENV170085540
CEAB01053545
105632
Verrucomicrobiota
TAG
Leu
>WENV170085837
CEAB01065523
260057
Verrucomicrobiota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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