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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
130 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170090396
CEAF01043165
269918
Bacillota
CTT
Lys
>WENV170090397
CEAF01043165
269918
Bacillota
CTT
Lys
>WENV170090398
CEAF01043165
269918
Bacillota
CTT
Lys
>WENV170089650
CEAF01014711
271702
Bacillota
TGT
Thr
>WENV170089457
CEAF01008351
283277
Bacillota
GTT
Asn
>WENV170089469
CEAF01008395
453866
Bacillota
GCA
Cys
>WENV170089470
CEAF01008395
453866
Bacillota
GCA
Cys
>WENV170090861
CEAF01061921
387058
Bacillota
CCT
Arg
>WENV170089388
CEAF01005640
453389
Bacillota
TCC
Gly
>WENV170090904
CEAF01062925
453389
Bacillota
TCC
Gly
>WENV170090406
CEAF01043510
172175
Bacillota
GAC
Val
>WENV170090649
CEAF01053417
159247
Bacillota
>WENV170090379
CEAF01042512
261552
Bacillota
CTT
Lys
>WENV170090565
CEAF01049900
451520
Bacillota
GCA
Cys
>WENV170089576
CEAF01011744
19350
Bacillota
GCT
Ser
>WENV170089962
CEAF01025776
261391
Bacillota
GTT
Asn
>WENV170089971
CEAF01026179
162485
Bacillota
CAT
Met
>WENV170090198
CEAF01034630
371253
Bacillota
TTG
Gln
>WENV170090857
CEAF01061748
378043
Bacillota
>WENV170089664
CEAF01015163
369774
Bacillota
GGT
Thr
>WENV170089732
CEAF01017302
369774
Bacillota
GGT
Thr
>WENV170089491
CEAF01009030
182164
Bacillota
CGG
Pro
>WENV170090602
CEAF01051159
182782
Bacillota
ACG
Arg
>WENV170090603
CEAF01051159
182782
Bacillota
ACG
Arg
>WENV170089332
CEAF01003927
269920
Bacillota
CGC
Ala
>WENV170090152
CEAF01032395
393129
Bacillota
CTC
Glu
>WENV170090325
CEAF01039750
43034
Bacillota
TGA
Ser
>WENV170089688
CEAF01015318
270601
Bacillota
TTT
Lys
>WENV170090199
CEAF01034630
270601
Bacillota
TTT
Lys
>WENV170089761
CEAF01018610
159242
Bacillota
CCG
Arg
>WENV170089834
CEAF01020856
159242
Bacillota
CCG
Arg
>WENV170090092
CEAF01031083
159242
Bacillota
CCG
Arg
>WENV170089639
CEAF01014138
177388
Bacillota
ACG
Arg
>WENV170089640
CEAF01014138
177388
Bacillota
ACG
Arg
>WENV170090015
CEAF01027561
161902
Bacillota
CAT
Met
>WENV170089928
CEAF01024214
124618
Bacillota
GAG
Leu
>WENV170089451
CEAF01007927
449103
Bacillota
GCA
Cys
>WENV170089900
CEAF01023086
286917
Bacillota
TGC
Ala
>WENV170090974
CEAF01066050
286917
Bacillota
TGC
Ala
>WENV170090391
CEAF01043085
448255
Bacillota
CTG
Gln
>WENV170090447
CEAF01045352
448255
Bacillota
CTG
Gln
>WENV170090933
CEAF01064689
448255
Bacillota
CTG
Gln
>WENV170090058
CEAF01029458
159234
Bacillota
CAC
Val
>WENV170090209
CEAF01035102
159234
Bacillota
CAC
Val
>WENV170089654
CEAF01014711
172174
Bacillota
CAT
Met
>WENV170089770
CEAF01018633
181889
Bacillota
>WENV170090759
CEAF01058359
143511
Bacillota
TGG
Pro
>WENV170089532
CEAF01010142
272758
Bacillota
GCC
Gly
>WENV170090083
CEAF01030613
269973
Bacillota
CCA
Trp
>WENV170089235
CEAF01000572
162688
Bacillota
GAT
Ile
>WENV170089528
CEAF01010141
162688
Bacillota
GAT
Ile
>WENV170090485
CEAF01047100
162688
Bacillota
GAT
Ile
>WENV170091096
CEAF01070779
162688
Bacillota
GAT
Ile
>WENV170089651
CEAF01014711
107867
Bacillota
GTA
Tyr
>WENV170090071
CEAF01030029
106802
Bacillota
GTA
Tyr
>WENV170091038
CEAF01068374
106802
Bacillota
GTA
Tyr
>WENV170090362
CEAF01041920
159237
Bacillota
TCT
Arg
>WENV170089448
CEAF01007798
90522
Bacillota
CAG
Leu
>WENV170090779
CEAF01058971
177383
Bacillota
CGG
Pro
>WENV170089703
CEAF01015855
374673
Bacillota
CTC
Glu
>WENV170090094
CEAF01031189
374673
Bacillota
CTC
Glu
>WENV170090494
CEAF01047670
90297
Bacillota
CAA
Leu
>WENV170089278
CEAF01002381
189541
Bacillota
GTC
Asp
>WENV170089485
CEAF01009026
189541
Bacillota
GTC
Asp
>WENV170090921
CEAF01063991
131005
Bacillota
TAG
Leu
>WENV170089797
CEAF01019712
158271
Bacillota
CCT
Arg
>WENV170090110
CEAF01031215
158271
Bacillota
CCT
Arg
>WENV170089287
CEAF01002381
259286
Bacillota
TTT
Lys
>WENV170089244
CEAF01001126
369393
Bacillota
TTC
Glu
>WENV170090301
CEAF01039160
293959
Bacillota
GGC
Ala
>WENV170089303
CEAF01002857
159089
Bacillota
GAT
Ile
>WENV170089265
CEAF01002366
369390
Bacillota
TGT
Thr
>WENV170089901
CEAF01023086
166292
Bacillota
GAT
Ile
>WENV170089890
CEAF01022594
371252
Bacillota
GTT
Asn
>WENV170090270
CEAF01038112
179203
Bacillota
ACG
Arg
>WENV170089713
CEAF01016020
371396
Bacillota
GCC
Gly
>WENV170090230
CEAF01036861
271703
Bacillota
GTG
His
>WENV170091098
CEAF01070782
11993
Bacillota
GGA
Ser
>WENV170089744
CEAF01018031
41297
Bacillota
TGA
Ser
>WENV170090514
CEAF01048284
41297
Bacillota
TGA
Ser
>WENV170089885
CEAF01022590
277767
Bacillota
CGC
Ala
>WENV170090290
CEAF01038665
450551
Bacillota
CCA
Trp
>WENV170089566
CEAF01011728
261358
Bacillota
GAA
Phe
>WENV170090756
CEAF01058345
42123
Bacillota
TAA
Leu
>WENV170091022
CEAF01067807
371335
Bacillota
CTC
Glu
>WENV170089837
CEAF01020879
159246
Bacillota
CGC
Ala
>WENV170089793
CEAF01019700
49796
Bacillota
TGA
Ser
>WENV170090180
CEAF01033999
49796
Bacillota
TGA
Ser
>WENV170090837
CEAF01060595
49796
Bacillota
TGA
Ser
>WENV170090247
CEAF01037397
162457
Bacillota
>WENV170090661
CEAF01053962
162457
Bacillota
>WENV170090181
CEAF01033999
5393
Bacillota
GCT
Ser
>WENV170089348
CEAF01004225
448256
Bacillota
TTG
Gln
>WENV170089851
CEAF01021384
448256
Bacillota
TTG
Gln
>WENV170090657
CEAF01053808
448256
Bacillota
TTG
Gln
>WENV170090658
CEAF01053898
448256
Bacillota
TTG
Gln
>WENV170089766
CEAF01018630
167205
Bacillota
TAC
Val
>WENV170089605
CEAF01013027
182424
Bacillota
CAT
Met
>WENV170089607
CEAF01013027
182424
Bacillota
CAT
Met
>WENV170090720
CEAF01056710
182424
Bacillota
CAT
Met
>WENV170090753
CEAF01058345
296620
Bacillota
GAA
Phe
>WENV170090809
CEAF01059547
296620
Bacillota
GAA
Phe
>WENV170090051
CEAF01028928
376229
Bacillota
CTC
Glu
>WENV170090052
CEAF01028928
376229
Bacillota
CTC
Glu
>WENV170089533
CEAF01010143
261310
Bacillota
CGT
Thr
>WENV170090678
CEAF01054533
452372
Bacillota
CCA
Trp
>WENV170089529
CEAF01010141
283213
Bacillota
CTT
Lys
>WENV170089525
CEAF01010138
181589
Bacillota
CGG
Pro
>WENV170090082
CEAF01030613
159862
Bacillota
>WENV170090875
CEAF01062826
20902
Bacillota
GCT
Ser
>WENV170090200
CEAF01034630
131046
Bacillota
TAG
Leu
>WENV170090233
CEAF01036861
125410
Bacillota
TAG
Leu
>WENV170091128
CEAF01072088
125410
Bacillota
TAG
Leu
>WENV170090479
CEAF01046620
451224
Bacillota
CCC
Gly
>WENV170089653
CEAF01014711
265662
Bacillota
GGT
Thr
>WENV170090285
CEAF01038488
369521
Bacillota
CTC
Glu
>WENV170090451
CEAF01045506
172176
Bacillota
TGG
Pro
>WENV170089919
CEAF01023666
375901
Bacillota
CCG
Arg
>WENV170090070
CEAF01030029
258131
Bacillota
TGT
Thr
>WENV170090940
CEAF01064990
258131
Bacillota
TGT
Thr
>WENV170089873
CEAF01022507
159239
Bacillota
CCT
Arg
>WENV170090124
CEAF01031225
71745
Bacillota
TAA
Leu
>WENV170089435
CEAF01007314
390939
Bacillota
CTG
Gln
>WENV170090232
CEAF01036861
292274
Bacillota
TTT
Lys
>WENV170091127
CEAF01072088
292274
Bacillota
TTT
Lys
>WENV170090727
CEAF01057252
159238
Bacillota
GTG
His
>WENV170090050
CEAF01028919
172178
Bacillota
GGG
Pro
>WENV170089602
CEAF01012915
261470
Bacillota
GTT
Asn
>WENV170090859
CEAF01061750
261470
Bacillota
GTT
Asn
>WENV170090800
CEAF01059354
51347
Bacillota
CGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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