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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
192 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170089977
CEAF01026340
65518
Bacteroidota
GAG
Leu
>WENV170090735
CEAF01057279
449143
Bacteroidota
TTG
Gln
>WENV170090932
CEAF01064501
449143
Bacteroidota
TTG
Gln
>WENV170090679
CEAF01054534
161400
Bacteroidota
>WENV170089405
CEAF01006202
171829
Bacteroidota
CAT
Met
>WENV170090212
CEAF01035199
171829
Bacteroidota
CAT
Met
>WENV170090218
CEAF01035801
171829
Bacteroidota
CAT
Met
>WENV170090647
CEAF01053320
105959
Bacteroidota
TAG
Leu
>WENV170090862
CEAF01062008
261421
Bacteroidota
CCA
Trp
>WENV170089840
CEAF01020920
26247
Bacteroidota
CGA
Ser
>WENV170089461
CEAF01008371
166871
Bacteroidota
TCT
Arg
>WENV170090439
CEAF01044920
166871
Bacteroidota
TCT
Arg
>WENV170090715
CEAF01056302
166871
Bacteroidota
TCT
Arg
>WENV170089646
CEAF01014705
369838
Bacteroidota
CCT
Arg
>WENV170089933
CEAF01024282
448691
Bacteroidota
TTG
Gln
>WENV170090056
CEAF01029401
448691
Bacteroidota
TTG
Gln
>WENV170090079
CEAF01030117
448691
Bacteroidota
TTG
Gln
>WENV170090192
CEAF01034179
448691
Bacteroidota
TTG
Gln
>WENV170090601
CEAF01051156
448691
Bacteroidota
TTG
Gln
>WENV170090155
CEAF01032924
160436
Bacteroidota
GGC
Ala
>WENV170090005
CEAF01027399
293219
Bacteroidota
TTT
Lys
>WENV170089682
CEAF01015316
369581
Bacteroidota
>WENV170090253
CEAF01037487
369581
Bacteroidota
>WENV170091011
CEAF01067688
369581
Bacteroidota
>WENV170089852
CEAF01021397
258780
Bacteroidota
>WENV170090097
CEAF01031202
258780
Bacteroidota
>WENV170090286
CEAF01038531
160416
Bacteroidota
GTG
His
>WENV170090944
CEAF01064991
160416
Bacteroidota
GTG
His
>WENV170090945
CEAF01064991
160416
Bacteroidota
GTG
His
>WENV170090170
CEAF01033524
258777
Bacteroidota
GAA
Phe
>WENV170090411
CEAF01043714
258777
Bacteroidota
GAA
Phe
>WENV170089680
CEAF01015314
65110
Bacteroidota
CAG
Leu
>WENV170090414
CEAF01043718
65110
Bacteroidota
CAG
Leu
>WENV170089546
CEAF01010699
49944
Bacteroidota
TAA
Leu
>WENV170089229
CEAF01000005
54117
Bacteroidota
TGA
Ser
>WENV170089581
CEAF01012330
54117
Bacteroidota
TGA
Ser
>WENV170089925
CEAF01023752
182139
Bacteroidota
CGG
Pro
>WENV170089975
CEAF01026279
182139
Bacteroidota
CGG
Pro
>WENV170091118
CEAF01071464
182139
Bacteroidota
CGG
Pro
>WENV170090392
CEAF01043144
139254
Bacteroidota
GAC
Val
>WENV170090793
CEAF01058982
371242
Bacteroidota
CCT
Arg
>WENV170090203
CEAF01034647
144955
Bacteroidota
GGG
Pro
>WENV170090250
CEAF01037484
144955
Bacteroidota
GGG
Pro
>WENV170090617
CEAF01051558
144955
Bacteroidota
GGG
Pro
>WENV170089984
CEAF01026373
259292
Bacteroidota
CGT
Thr
>WENV170090450
CEAF01045496
65111
Bacteroidota
CAA
Leu
>WENV170090697
CEAF01055119
26362
Bacteroidota
GCT
Ser
>WENV170089625
CEAF01014069
138923
Bacteroidota
TAC
Val
>WENV170089626
CEAF01014069
138923
Bacteroidota
TAC
Val
>WENV170089627
CEAF01014069
138923
Bacteroidota
TAC
Val
>WENV170090140
CEAF01031950
138923
Bacteroidota
TAC
Val
>WENV170090141
CEAF01031950
138923
Bacteroidota
TAC
Val
>WENV170090869
CEAF01062352
138923
Bacteroidota
TAC
Val
>WENV170090870
CEAF01062352
138923
Bacteroidota
TAC
Val
>WENV170089257
CEAF01001693
449113
Bacteroidota
GCA
Cys
>WENV170090539
CEAF01048863
261339
Bacteroidota
CCA
Trp
>WENV170090211
CEAF01035199
143081
Bacteroidota
TGG
Pro
>WENV170090566
CEAF01049911
143081
Bacteroidota
TGG
Pro
>WENV170090542
CEAF01048863
105937
Bacteroidota
GTA
Tyr
>WENV170089399
CEAF01005748
261419
Bacteroidota
CGG
Pro
>WENV170089245
CEAF01001167
162517
Bacteroidota
GTT
Asn
>WENV170090538
CEAF01048863
261338
Bacteroidota
GTT
Asn
>WENV170089336
CEAF01004046
452097
Bacteroidota
CTG
Gln
>WENV170089725
CEAF01016850
452097
Bacteroidota
CTG
Gln
>WENV170090624
CEAF01051826
374505
Bacteroidota
CTC
Glu
>WENV170090332
CEAF01039824
159918
Bacteroidota
GTG
His
>WENV170090483
CEAF01047008
124700
Bacteroidota
>WENV170090708
CEAF01055731
124700
Bacteroidota
>WENV170090711
CEAF01055731
124700
Bacteroidota
>WENV170090073
CEAF01030033
268516
Bacteroidota
TTT
Lys
>WENV170091012
CEAF01067704
107969
Bacteroidota
GTA
Tyr
>WENV170089264
CEAF01002362
370133
Bacteroidota
CCG
Arg
>WENV170089472
CEAF01008476
105470
Bacteroidota
TAG
Leu
>WENV170089318
CEAF01002976
370665
Bacteroidota
CCG
Arg
>WENV170089482
CEAF01009019
52815
Bacteroidota
TAA
Leu
>WENV170089712
CEAF01015950
52815
Bacteroidota
TAA
Leu
>WENV170089404
CEAF01006202
271690
Bacteroidota
TTT
Lys
>WENV170089442
CEAF01007732
271690
Bacteroidota
TTT
Lys
>WENV170091059
CEAF01069084
259289
Bacteroidota
CTC
Glu
>WENV170089447
CEAF01007754
261420
Bacteroidota
ACG
Arg
>WENV170090519
CEAF01048525
261420
Bacteroidota
ACG
Arg
>WENV170090371
CEAF01041946
261333
Bacteroidota
CCC
Gly
>WENV170090970
CEAF01065610
106801
Bacteroidota
CAG
Leu
>WENV170091102
CEAF01070837
106801
Bacteroidota
CAG
Leu
>WENV170090709
CEAF01055731
65114
Bacteroidota
GAG
Leu
>WENV170090712
CEAF01055731
65114
Bacteroidota
GAG
Leu
>WENV170090415
CEAF01043718
71334
Bacteroidota
GAG
Leu
>WENV170089227
CEAF01000005
259271
Bacteroidota
CTT
Lys
>WENV170089748
CEAF01018091
259271
Bacteroidota
CTT
Lys
>WENV170089749
CEAF01018091
259271
Bacteroidota
CTT
Lys
>WENV170090670
CEAF01054040
159953
Bacteroidota
CAT
Met
>WENV170089610
CEAF01013393
20980
Bacteroidota
GGA
Ser
>WENV170090732
CEAF01057273
448605
Bacteroidota
CTG
Gln
>WENV170091088
CEAF01070229
448605
Bacteroidota
CTG
Gln
>WENV170089681
CEAF01015314
259272
Bacteroidota
CGT
Thr
>WENV170090652
CEAF01053441
141365
Bacteroidota
GGG
Pro
>WENV170090540
CEAF01048863
449089
Bacteroidota
TTG
Gln
>WENV170090873
CEAF01062373
371246
Bacteroidota
CCT
Arg
>WENV170090280
CEAF01038113
49945
Bacteroidota
TGA
Ser
>WENV170089970
CEAF01026044
258386
Bacteroidota
TTT
Lys
>WENV170089727
CEAF01016932
160434
Bacteroidota
GTG
His
>WENV170089677
CEAF01015314
160417
Bacteroidota
GGC
Ala
>WENV170090172
CEAF01033623
160417
Bacteroidota
GGC
Ala
>WENV170089814
CEAF01020284
166971
Bacteroidota
>WENV170090310
CEAF01039236
166971
Bacteroidota
>WENV170089228
CEAF01000005
288732
Bacteroidota
CTT
Lys
>WENV170090278
CEAF01038113
288732
Bacteroidota
CTT
Lys
>WENV170090279
CEAF01038113
288732
Bacteroidota
CTT
Lys
>WENV170089796
CEAF01019710
448600
Bacteroidota
CTG
Gln
>WENV170089393
CEAF01005667
162591
Bacteroidota
GTG
His
>WENV170091106
CEAF01070855
162591
Bacteroidota
GTG
His
>WENV170090669
CEAF01054021
449090
Bacteroidota
CTG
Gln
>WENV170089545
CEAF01010699
285851
Bacteroidota
GCC
Gly
>WENV170089547
CEAF01010699
285851
Bacteroidota
GCC
Gly
>WENV170090191
CEAF01034095
285851
Bacteroidota
GCC
Gly
>WENV170090413
CEAF01043718
285851
Bacteroidota
GCC
Gly
>WENV170090841
CEAF01060705
285851
Bacteroidota
GCC
Gly
>WENV170091060
CEAF01069115
285851
Bacteroidota
GCC
Gly
>WENV170090267
CEAF01038107
261335
Bacteroidota
TTT
Lys
>WENV170091087
CEAF01070225
261335
Bacteroidota
TTT
Lys
>WENV170090654
CEAF01053654
166972
Bacteroidota
TGT
Thr
>WENV170089426
CEAF01006926
54039
Bacteroidota
TGA
Ser
>WENV170089764
CEAF01018628
54039
Bacteroidota
TGA
Ser
>WENV170089948
CEAF01024907
54039
Bacteroidota
TGA
Ser
>WENV170090258
CEAF01037489
54039
Bacteroidota
TGA
Ser
>WENV170090269
CEAF01038111
54039
Bacteroidota
TGA
Ser
>WENV170090328
CEAF01039756
54039
Bacteroidota
TGA
Ser
>WENV170090401
CEAF01043215
54039
Bacteroidota
TGA
Ser
>WENV170090350
CEAF01040861
162594
Bacteroidota
GGC
Ala
>WENV170090581
CEAF01050605
162594
Bacteroidota
GGC
Ala
>WENV170090625
CEAF01052131
162594
Bacteroidota
GGC
Ala
>WENV170090872
CEAF01062369
162594
Bacteroidota
GGC
Ala
>WENV170090537
CEAF01048863
261337
Bacteroidota
>WENV170090216
CEAF01035655
293859
Bacteroidota
CCA
Trp
>WENV170091067
CEAF01069607
193541
Bacteroidota
GTT
Asn
>WENV170089596
CEAF01012904
193541
Bacteroidota
GTT
Asn
>WENV170089597
CEAF01012904
193541
Bacteroidota
GTT
Asn
>WENV170089665
CEAF01015202
193541
Bacteroidota
GTT
Asn
>WENV170089666
CEAF01015202
193541
Bacteroidota
GTT
Asn
>WENV170089667
CEAF01015202
193541
Bacteroidota
GTT
Asn
>WENV170089758
CEAF01018421
193541
Bacteroidota
GTT
Asn
>WENV170089759
CEAF01018421
193541
Bacteroidota
GTT
Asn
>WENV170090011
CEAF01027450
193541
Bacteroidota
GTT
Asn
>WENV170090012
CEAF01027450
193541
Bacteroidota
GTT
Asn
>WENV170090138
CEAF01031905
193541
Bacteroidota
GTT
Asn
>WENV170090205
CEAF01034668
193541
Bacteroidota
GTT
Asn
>WENV170090424
CEAF01044287
193541
Bacteroidota
GTT
Asn
>WENV170090425
CEAF01044287
193541
Bacteroidota
GTT
Asn
>WENV170090693
CEAF01055115
193541
Bacteroidota
GTT
Asn
>WENV170090694
CEAF01055115
193541
Bacteroidota
GTT
Asn
>WENV170090790
CEAF01058982
193541
Bacteroidota
GTT
Asn
>WENV170090791
CEAF01058982
193541
Bacteroidota
GTT
Asn
>WENV170090792
CEAF01058982
193541
Bacteroidota
GTT
Asn
>WENV170090926
CEAF01064020
193541
Bacteroidota
GTT
Asn
>WENV170090927
CEAF01064020
193541
Bacteroidota
GTT
Asn
>WENV170091064
CEAF01069607
193541
Bacteroidota
GTT
Asn
>WENV170091065
CEAF01069607
193541
Bacteroidota
GTT
Asn
>WENV170091066
CEAF01069607
193541
Bacteroidota
GTT
Asn
>WENV170089261
CEAF01001796
20913
Bacteroidota
GGA
Ser
>WENV170089859
CEAF01021546
20913
Bacteroidota
GGA
Ser
>WENV170090252
CEAF01037487
142773
Bacteroidota
TGG
Pro
>WENV170089236
CEAF01000604
160459
Bacteroidota
GGC
Ala
>WENV170090444
CEAF01045019
160459
Bacteroidota
GGC
Ala
>WENV170089872
CEAF01022389
142668
Bacteroidota
TAC
Val
>WENV170090048
CEAF01028880
142668
Bacteroidota
TAC
Val
>WENV170090867
CEAF01062351
369579
Bacteroidota
GGT
Thr
>WENV170089910
CEAF01023105
89183
Bacteroidota
GTA
Tyr
>WENV170090866
CEAF01062351
89183
Bacteroidota
GTA
Tyr
>WENV170090942
CEAF01064991
89183
Bacteroidota
GTA
Tyr
>WENV170090201
CEAF01034636
160415
Bacteroidota
TCT
Arg
>WENV170089979
CEAF01026354
448601
Bacteroidota
TTG
Gln
>WENV170090723
CEAF01056861
448601
Bacteroidota
TTG
Gln
>WENV170090541
CEAF01048863
371225
Bacteroidota
TTC
Glu
>WENV170090551
CEAF01049344
294337
Bacteroidota
CCC
Gly
>WENV170091113
CEAF01071448
294337
Bacteroidota
CCC
Gly
>WENV170089638
CEAF01014111
21025
Bacteroidota
GGA
Ser
>WENV170089371
CEAF01005134
92319
Bacteroidota
GTA
Tyr
>WENV170090676
CEAF01054217
92319
Bacteroidota
GTA
Tyr
>WENV170089678
CEAF01015314
18452
Bacteroidota
GGA
Ser
>WENV170090478
CEAF01046593
18452
Bacteroidota
GGA
Ser
>WENV170089716
CEAF01016378
30330
Bacteroidota
CGA
Ser
>WENV170090412
CEAF01043717
160435
Bacteroidota
GGC
Ala
>WENV170090689
CEAF01054876
160435
Bacteroidota
GGC
Ala
>WENV170089811
CEAF01020284
88754
Bacteroidota
GTA
Tyr
>WENV170090655
CEAF01053654
88754
Bacteroidota
GTA
Tyr
>WENV170089721
CEAF01016420
188752
Bacteroidota
TCT
Arg
>WENV170089437
CEAF01007331
105282
Bacteroidota
TAG
Leu
>WENV170090449
CEAF01045496
105282
Bacteroidota
TAG
Leu
>WENV170090493
CEAF01047622
278748
Bacteroidota
CCC
Gly
>WENV170090335
CEAF01040327
28588
Bacteroidota
GCT
Ser
>WENV170090465
CEAF01046001
28588
Bacteroidota
GCT
Ser
>WENV170089432
CEAF01007282
261340
Bacteroidota
CTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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