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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170089774
CEAF01018681
67626
Thermodesulfobacteriota
CAG
Leu
>WENV170090813
CEAF01059591
67626
Thermodesulfobacteriota
CAG
Leu
>WENV170091025
CEAF01067836
67626
Thermodesulfobacteriota
CAG
Leu
>WENV170091026
CEAF01067836
67626
Thermodesulfobacteriota
CAG
Leu
>WENV170089263
CEAF01001902
169151
Thermodesulfobacteriota
TTC
Glu
>WENV170090445
CEAF01045170
169151
Thermodesulfobacteriota
TTC
Glu
>WENV170090455
CEAF01045515
169151
Thermodesulfobacteriota
TTC
Glu
>WENV170091068
CEAF01069625
270464
Thermodesulfobacteriota
GGT
Thr
>WENV170089914
CEAF01023147
170962
Thermodesulfobacteriota
CAT
Met
>WENV170090407
CEAF01043574
170962
Thermodesulfobacteriota
CAT
Met
>WENV170090408
CEAF01043574
170962
Thermodesulfobacteriota
CAT
Met
>WENV170089799
CEAF01019734
268423
Thermodesulfobacteriota
>WENV170089786
CEAF01019239
174640
Thermodesulfobacteriota
GTC
Asp
>WENV170091075
CEAF01070200
174640
Thermodesulfobacteriota
GTC
Asp
>WENV170091076
CEAF01070200
174640
Thermodesulfobacteriota
GTC
Asp
>WENV170089317
CEAF01002946
170965
Thermodesulfobacteriota
TCT
Arg
>WENV170091110
CEAF01071302
92150
Thermodesulfobacteriota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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