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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
85 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170096065
CEAK01002056
271702
Bacillota
TGT
Thr
>WENV170095971
CEAK01000006
172175
Bacillota
GAC
Val
>WENV170096757
CEAK01031630
159235
Bacillota
GTC
Asp
>WENV170096632
CEAK01025661
19350
Bacillota
GCT
Ser
>WENV170096171
CEAK01007072
260820
Bacillota
TGC
Ala
>WENV170096146
CEAK01005491
161897
Bacillota
ACG
Arg
>WENV170096232
CEAK01009392
257968
Bacillota
GCC
Gly
>WENV170096758
CEAK01031630
257968
Bacillota
GCC
Gly
>WENV170096190
CEAK01007493
378043
Bacillota
>WENV170096149
CEAK01005804
68274
Bacillota
TAA
Leu
>WENV170096663
CEAK01027711
369774
Bacillota
GGT
Thr
>WENV170096075
CEAK01002416
182782
Bacillota
ACG
Arg
>WENV170096413
CEAK01015610
182782
Bacillota
ACG
Arg
>WENV170096231
CEAK01009392
257970
Bacillota
GAA
Phe
>WENV170096087
CEAK01003079
257963
Bacillota
>WENV170096155
CEAK01006082
159242
Bacillota
CCG
Arg
>WENV170096286
CEAK01011239
258854
Bacillota
TGC
Ala
>WENV170096728
CEAK01030488
161902
Bacillota
CAT
Met
>WENV170096430
CEAK01016267
257972
Bacillota
CGG
Pro
>WENV170096788
CEAK01032779
257972
Bacillota
CGG
Pro
>WENV170096495
CEAK01019618
64854
Bacillota
TAA
Leu
>WENV170096614
CEAK01024883
64854
Bacillota
TAA
Leu
>WENV170096563
CEAK01022654
124618
Bacillota
GAG
Leu
>WENV170096389
CEAK01015028
161901
Bacillota
TCT
Arg
>WENV170096739
CEAK01030787
286917
Bacillota
TGC
Ala
>WENV170096429
CEAK01016267
448255
Bacillota
CTG
Gln
>WENV170096782
CEAK01032531
448255
Bacillota
CTG
Gln
>WENV170096521
CEAK01020524
159234
Bacillota
CAC
Val
>WENV170096069
CEAK01002056
172174
Bacillota
CAT
Met
>WENV170096494
CEAK01019395
272758
Bacillota
GCC
Gly
>WENV170096206
CEAK01008355
171336
Bacillota
CCT
Arg
>WENV170096070
CEAK01002212
162688
Bacillota
GAT
Ile
>WENV170096066
CEAK01002056
107867
Bacillota
GTA
Tyr
>WENV170096633
CEAK01025719
161895
Bacillota
GAC
Val
>WENV170096468
CEAK01017960
90394
Bacillota
TAG
Leu
>WENV170095982
CEAK01000128
159237
Bacillota
TCT
Arg
>WENV170096010
CEAK01000316
159237
Bacillota
TCT
Arg
>WENV170096548
CEAK01021213
90522
Bacillota
CAG
Leu
>WENV170096322
CEAK01012885
189541
Bacillota
GTC
Asp
>WENV170096552
CEAK01021531
369390
Bacillota
TGT
Thr
>WENV170096474
CEAK01018540
271703
Bacillota
GTG
His
>WENV170096168
CEAK01006933
11993
Bacillota
GGA
Ser
>WENV170096405
CEAK01015409
11993
Bacillota
GGA
Ser
>WENV170096503
CEAK01019906
11993
Bacillota
GGA
Ser
>WENV170096499
CEAK01019656
277767
Bacillota
CGC
Ala
>WENV170096032
CEAK01001522
42123
Bacillota
TAA
Leu
>WENV170096040
CEAK01001707
64856
Bacillota
CAA
Leu
>WENV170096229
CEAK01009382
49796
Bacillota
TGA
Ser
>WENV170096249
CEAK01010170
450457
Bacillota
CTG
Gln
>WENV170096550
CEAK01021357
450457
Bacillota
CTG
Gln
>WENV170096230
CEAK01009382
5393
Bacillota
GCT
Ser
>WENV170096212
CEAK01008470
162605
Bacillota
CCT
Arg
>WENV170096475
CEAK01018540
308738
Bacillota
TTG
Gln
>WENV170096368
CEAK01014589
448256
Bacillota
TTG
Gln
>WENV170096799
CEAK01033534
448256
Bacillota
TTG
Gln
>WENV170096807
CEAK01033825
167205
Bacillota
TAC
Val
>WENV170096029
CEAK01001522
296620
Bacillota
GAA
Phe
>WENV170096365
CEAK01014471
296620
Bacillota
GAA
Phe
>WENV170096244
CEAK01009894
261310
Bacillota
CGT
Thr
>WENV170096718
CEAK01029632
257960
Bacillota
CGC
Ala
>WENV170096455
CEAK01017164
18326
Bacillota
CGA
Ser
>WENV170096619
CEAK01025128
18326
Bacillota
CGA
Ser
>WENV170096444
CEAK01016883
265901
Bacillota
TGT
Thr
>WENV170096477
CEAK01018540
125410
Bacillota
TAG
Leu
>WENV170096068
CEAK01002056
265662
Bacillota
GGT
Thr
>WENV170096625
CEAK01025131
448339
Bacillota
GCA
Cys
>WENV170096099
CEAK01003921
159236
Bacillota
GTT
Asn
>WENV170096618
CEAK01025108
159236
Bacillota
GTT
Asn
>WENV170096647
CEAK01026689
159236
Bacillota
GTT
Asn
>WENV170096768
CEAK01031723
159236
Bacillota
GTT
Asn
>WENV170096267
CEAK01010376
257976
Bacillota
CCC
Gly
>WENV170096687
CEAK01028257
172176
Bacillota
TGG
Pro
>WENV170096191
CEAK01007494
258131
Bacillota
TGT
Thr
>WENV170096346
CEAK01013980
159239
Bacillota
CCT
Arg
>WENV170096759
CEAK01031630
369392
Bacillota
GCA
Cys
>WENV170096166
CEAK01006895
292274
Bacillota
TTT
Lys
>WENV170096476
CEAK01018540
292274
Bacillota
TTT
Lys
>WENV170096542
CEAK01021200
257965
Bacillota
TGG
Pro
>WENV170096598
CEAK01023763
64855
Bacillota
CAG
Leu
>WENV170095983
CEAK01000128
159238
Bacillota
GTG
His
>WENV170096011
CEAK01000316
159238
Bacillota
GTG
His
>WENV170096492
CEAK01019354
172178
Bacillota
GGG
Pro
>WENV170096216
CEAK01008658
51347
Bacillota
CGA
Ser
>WENV170096329
CEAK01013249
369391
Bacillota
TCC
Gly
>WENV170096339
CEAK01013771
12159
Bacillota
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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