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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170098914
CEAO01006815
105930
Actinomycetota
TAA
Leu
>WENV170099364
CEAO01023028
105930
Actinomycetota
TAA
Leu
>WENV170098991
CEAO01009520
105929
Actinomycetota
GTA
Tyr
>WENV170099172
CEAO01015431
162410
Actinomycetota
TCT
Arg
>WENV170098706
CEAO01000236
261299
Actinomycetota
GCC
Gly
>WENV170098777
CEAO01002204
261298
Actinomycetota
CGT
Thr
>WENV170099210
CEAO01016543
26695
Actinomycetota
GAG
Leu
>WENV170099183
CEAO01015809
139249
Actinomycetota
GTC
Asp
>WENV170099029
CEAO01010880
162417
Actinomycetota
CGG
Pro
>WENV170099206
CEAO01016519
261306
Actinomycetota
>WENV170099409
CEAO01023554
162411
Actinomycetota
CCG
Arg
>WENV170099365
CEAO01023105
162414
Actinomycetota
GAT
Ile
>WENV170099367
CEAO01023105
162414
Actinomycetota
GAT
Ile
>WENV170099036
CEAO01010922
26694
Actinomycetota
TGA
Ser
>WENV170098990
CEAO01009520
370050
Actinomycetota
TGT
Thr
>WENV170098992
CEAO01009520
261300
Actinomycetota
GGT
Thr
>WENV170099400
CEAO01023484
449079
Actinomycetota
CTG
Gln
>WENV170099169
CEAO01015316
124817
Actinomycetota
TAG
Leu
>WENV170098827
CEAO01003568
261307
Actinomycetota
TAC
Val
>WENV170098751
CEAO01001345
183611
Actinomycetota
GGG
Pro
>WENV170098926
CEAO01007021
65500
Actinomycetota
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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