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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
149 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170098755
CEAO01001403
161400
Bacteroidota
>WENV170099266
CEAO01019553
161400
Bacteroidota
>WENV170099109
CEAO01013095
171829
Bacteroidota
CAT
Met
>WENV170099193
CEAO01015931
171829
Bacteroidota
CAT
Met
>WENV170098752
CEAO01001401
159893
Bacteroidota
TCT
Arg
>WENV170098939
CEAO01007971
369581
Bacteroidota
>WENV170099224
CEAO01017238
369581
Bacteroidota
>WENV170099368
CEAO01023123
286278
Bacteroidota
TTT
Lys
>WENV170099404
CEAO01023522
286278
Bacteroidota
TTT
Lys
>WENV170098828
CEAO01003608
258780
Bacteroidota
>WENV170099126
CEAO01013479
258780
Bacteroidota
>WENV170098781
CEAO01002274
160416
Bacteroidota
GTG
His
>WENV170098789
CEAO01002703
272161
Bacteroidota
CGT
Thr
>WENV170099161
CEAO01014835
272161
Bacteroidota
CGT
Thr
>WENV170098872
CEAO01005647
65110
Bacteroidota
CAG
Leu
>WENV170098940
CEAO01007984
65110
Bacteroidota
CAG
Leu
>WENV170099157
CEAO01014619
49944
Bacteroidota
TAA
Leu
>WENV170099159
CEAO01014619
49944
Bacteroidota
TAA
Leu
>WENV170098799
CEAO01002908
54117
Bacteroidota
TGA
Ser
>WENV170098943
CEAO01007984
182139
Bacteroidota
CGG
Pro
>WENV170098744
CEAO01001008
105701
Bacteroidota
TAG
Leu
>WENV170099214
CEAO01016561
18662
Bacteroidota
GGA
Ser
>WENV170098840
CEAO01004104
144955
Bacteroidota
GGG
Pro
>WENV170098970
CEAO01008692
144955
Bacteroidota
GGG
Pro
>WENV170099026
CEAO01010683
144955
Bacteroidota
GGG
Pro
>WENV170099096
CEAO01012511
144955
Bacteroidota
GGG
Pro
>WENV170099320
CEAO01021992
144955
Bacteroidota
GGG
Pro
>WENV170099022
CEAO01010524
259292
Bacteroidota
CGT
Thr
>WENV170099091
CEAO01012481
65111
Bacteroidota
CAA
Leu
>WENV170098750
CEAO01001185
26362
Bacteroidota
GCT
Ser
>WENV170099440
CEAO01025008
26362
Bacteroidota
GCT
Ser
>WENV170099340
CEAO01022453
138923
Bacteroidota
TAC
Val
>WENV170099341
CEAO01022453
138923
Bacteroidota
TAC
Val
>WENV170099342
CEAO01022453
138923
Bacteroidota
TAC
Val
>WENV170098848
CEAO01004805
449113
Bacteroidota
GCA
Cys
>WENV170099255
CEAO01018841
138971
Bacteroidota
GGG
Pro
>WENV170099293
CEAO01021037
65641
Bacteroidota
GAG
Leu
>WENV170099296
CEAO01021037
65641
Bacteroidota
GAG
Leu
>WENV170098854
CEAO01004866
452097
Bacteroidota
CTG
Gln
>WENV170098999
CEAO01009709
452097
Bacteroidota
CTG
Gln
>WENV170099016
CEAO01010280
452097
Bacteroidota
CTG
Gln
>WENV170099430
CEAO01024632
452097
Bacteroidota
CTG
Gln
>WENV170099124
CEAO01013338
374505
Bacteroidota
CTC
Glu
>WENV170098915
CEAO01006840
166467
Bacteroidota
>WENV170099136
CEAO01013925
124700
Bacteroidota
>WENV170099139
CEAO01013925
124700
Bacteroidota
>WENV170099376
CEAO01023316
124700
Bacteroidota
>WENV170099379
CEAO01023316
124700
Bacteroidota
>WENV170099382
CEAO01023316
124700
Bacteroidota
>WENV170098887
CEAO01006223
161250
Bacteroidota
GTT
Asn
>WENV170098888
CEAO01006223
161250
Bacteroidota
GTT
Asn
>WENV170098889
CEAO01006223
161250
Bacteroidota
GTT
Asn
>WENV170098890
CEAO01006223
161250
Bacteroidota
GTT
Asn
>WENV170098917
CEAO01006840
161250
Bacteroidota
GTT
Asn
>WENV170098918
CEAO01006840
161250
Bacteroidota
GTT
Asn
>WENV170098907
CEAO01006796
293347
Bacteroidota
CCA
Trp
>WENV170098765
CEAO01001830
370133
Bacteroidota
CCG
Arg
>WENV170099264
CEAO01019367
105470
Bacteroidota
TAG
Leu
>WENV170099098
CEAO01012688
370665
Bacteroidota
CCG
Arg
>WENV170099094
CEAO01012486
52815
Bacteroidota
TAA
Leu
>WENV170099456
CEAO01025407
52815
Bacteroidota
TAA
Leu
>WENV170099069
CEAO01011861
259289
Bacteroidota
CTC
Glu
>WENV170098927
CEAO01007065
261420
Bacteroidota
ACG
Arg
>WENV170098954
CEAO01008133
106801
Bacteroidota
CAG
Leu
>WENV170099137
CEAO01013925
65114
Bacteroidota
GAG
Leu
>WENV170099140
CEAO01013925
65114
Bacteroidota
GAG
Leu
>WENV170099377
CEAO01023316
65114
Bacteroidota
GAG
Leu
>WENV170099380
CEAO01023316
65114
Bacteroidota
GAG
Leu
>WENV170098873
CEAO01005647
71334
Bacteroidota
GAG
Leu
>WENV170098800
CEAO01002908
259271
Bacteroidota
CTT
Lys
>WENV170098855
CEAO01004903
159953
Bacteroidota
CAT
Met
>WENV170099208
CEAO01016542
159953
Bacteroidota
CAT
Met
>WENV170099128
CEAO01013544
20980
Bacteroidota
GGA
Ser
>WENV170098839
CEAO01004104
448605
Bacteroidota
CTG
Gln
>WENV170099319
CEAO01021992
448605
Bacteroidota
CTG
Gln
>WENV170098941
CEAO01007984
259272
Bacteroidota
CGT
Thr
>WENV170098886
CEAO01006219
141365
Bacteroidota
GGG
Pro
>WENV170099248
CEAO01018434
371246
Bacteroidota
CCT
Arg
>WENV170098804
CEAO01002908
49945
Bacteroidota
TGA
Ser
>WENV170099300
CEAO01021043
159415
Bacteroidota
>WENV170099454
CEAO01025354
160434
Bacteroidota
GTG
His
>WENV170098945
CEAO01007984
160417
Bacteroidota
GGC
Ala
>WENV170098903
CEAO01006762
378278
Bacteroidota
CCT
Arg
>WENV170099011
CEAO01010258
166971
Bacteroidota
>WENV170099082
CEAO01012475
166971
Bacteroidota
>WENV170099190
CEAO01015930
166971
Bacteroidota
>WENV170098801
CEAO01002908
288732
Bacteroidota
CTT
Lys
>WENV170098802
CEAO01002908
288732
Bacteroidota
CTT
Lys
>WENV170098803
CEAO01002908
288732
Bacteroidota
CTT
Lys
>WENV170098747
CEAO01001185
448600
Bacteroidota
CTG
Gln
>WENV170098871
CEAO01005647
285851
Bacteroidota
GCC
Gly
>WENV170099122
CEAO01013336
285851
Bacteroidota
GCC
Gly
>WENV170099156
CEAO01014619
285851
Bacteroidota
GCC
Gly
>WENV170099158
CEAO01014619
285851
Bacteroidota
GCC
Gly
>WENV170099160
CEAO01014619
285851
Bacteroidota
GCC
Gly
>WENV170098865
CEAO01005457
54039
Bacteroidota
TGA
Ser
>WENV170098866
CEAO01005463
54039
Bacteroidota
TGA
Ser
>WENV170099030
CEAO01010891
54039
Bacteroidota
TGA
Ser
>WENV170099207
CEAO01016540
54039
Bacteroidota
TGA
Ser
>WENV170099283
CEAO01020665
54039
Bacteroidota
TGA
Ser
>WENV170099285
CEAO01020665
54039
Bacteroidota
TGA
Ser
>WENV170099315
CEAO01021823
54039
Bacteroidota
TGA
Ser
>WENV170099434
CEAO01024728
162594
Bacteroidota
GGC
Ala
>WENV170099333
CEAO01022223
65115
Bacteroidota
GAG
Leu
>WENV170099336
CEAO01022223
65115
Bacteroidota
GAG
Leu
>WENV170099411
CEAO01023755
90587
Bacteroidota
TAG
Leu
>WENV170098923
CEAO01006986
193541
Bacteroidota
GTT
Asn
>WENV170098924
CEAO01006986
193541
Bacteroidota
GTT
Asn
>WENV170098925
CEAO01006986
193541
Bacteroidota
GTT
Asn
>WENV170099142
CEAO01013927
193541
Bacteroidota
GTT
Asn
>WENV170099176
CEAO01015467
193541
Bacteroidota
GTT
Asn
>WENV170099177
CEAO01015467
193541
Bacteroidota
GTT
Asn
>WENV170099219
CEAO01016871
193541
Bacteroidota
GTT
Asn
>WENV170099220
CEAO01016871
193541
Bacteroidota
GTT
Asn
>WENV170099221
CEAO01016871
193541
Bacteroidota
GTT
Asn
>WENV170099244
CEAO01018434
193541
Bacteroidota
GTT
Asn
>WENV170099245
CEAO01018434
193541
Bacteroidota
GTT
Asn
>WENV170099246
CEAO01018434
193541
Bacteroidota
GTT
Asn
>WENV170099247
CEAO01018434
193541
Bacteroidota
GTT
Asn
>WENV170099279
CEAO01020610
193541
Bacteroidota
GTT
Asn
>WENV170098808
CEAO01003095
20913
Bacteroidota
GGA
Ser
>WENV170098842
CEAO01004442
20913
Bacteroidota
GGA
Ser
>WENV170099213
CEAO01016561
162617
Bacteroidota
CAT
Met
>WENV170098938
CEAO01007971
142773
Bacteroidota
TGG
Pro
>WENV170099402
CEAO01023522
258391
Bacteroidota
CTT
Lys
>WENV170098932
CEAO01007566
160459
Bacteroidota
GGC
Ala
>WENV170099406
CEAO01023522
142668
Bacteroidota
TAC
Val
>WENV170099407
CEAO01023522
142668
Bacteroidota
TAC
Val
>WENV170098935
CEAO01007767
369579
Bacteroidota
GGT
Thr
>WENV170099351
CEAO01022766
369579
Bacteroidota
GGT
Thr
>WENV170098779
CEAO01002274
89183
Bacteroidota
GTA
Tyr
>WENV170098934
CEAO01007767
89183
Bacteroidota
GTA
Tyr
>WENV170099310
CEAO01021626
89183
Bacteroidota
GTA
Tyr
>WENV170099350
CEAO01022766
89183
Bacteroidota
GTA
Tyr
>WENV170098952
CEAO01008126
160415
Bacteroidota
TCT
Arg
>WENV170099178
CEAO01015468
448601
Bacteroidota
TTG
Gln
>WENV170098862
CEAO01005264
294337
Bacteroidota
CCC
Gly
>WENV170099211
CEAO01016547
21025
Bacteroidota
GGA
Ser
>WENV170098899
CEAO01006583
92319
Bacteroidota
GTA
Tyr
>WENV170098906
CEAO01006796
376506
Bacteroidota
GGT
Thr
>WENV170098847
CEAO01004669
18452
Bacteroidota
GGA
Ser
>WENV170098946
CEAO01007984
18452
Bacteroidota
GGA
Ser
>WENV170099225
CEAO01017238
30330
Bacteroidota
CGA
Ser
>WENV170098843
CEAO01004458
160435
Bacteroidota
GGC
Ala
>WENV170098928
CEAO01007324
160435
Bacteroidota
GGC
Ala
>WENV170099047
CEAO01011433
88754
Bacteroidota
GTA
Tyr
>WENV170099084
CEAO01012475
88754
Bacteroidota
GTA
Tyr
>WENV170099090
CEAO01012481
105282
Bacteroidota
TAG
Leu
>WENV170099302
CEAO01021231
278748
Bacteroidota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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