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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
86 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170105328
CEBV01003907
257966
Bacillota
CCA
Trp
>WENV170106413
CEBV01048038
257969
Bacillota
TAC
Val
>WENV170106023
CEBV01031915
270088
Bacillota
CGT
Thr
>WENV170105320
CEBV01003496
172175
Bacillota
GAC
Val
>WENV170105474
CEBV01011239
257968
Bacillota
GCC
Gly
>WENV170105912
CEBV01026683
257968
Bacillota
GCC
Gly
>WENV170106412
CEBV01048038
257968
Bacillota
GCC
Gly
>WENV170105395
CEBV01008024
378043
Bacillota
>WENV170106000
CEBV01030767
369774
Bacillota
GGT
Thr
>WENV170105825
CEBV01022889
369809
Bacillota
CTC
Glu
>WENV170105968
CEBV01029066
369809
Bacillota
CTC
Glu
>WENV170105402
CEBV01008547
182782
Bacillota
ACG
Arg
>WENV170105473
CEBV01011239
257970
Bacillota
GAA
Phe
>WENV170105911
CEBV01026683
257970
Bacillota
GAA
Phe
>WENV170106449
CEBV01050127
257963
Bacillota
>WENV170105898
CEBV01026308
159242
Bacillota
CCG
Arg
>WENV170106009
CEBV01031203
159242
Bacillota
CCG
Arg
>WENV170106442
CEBV01049721
159242
Bacillota
CCG
Arg
>WENV170105531
CEBV01013311
161902
Bacillota
CAT
Met
>WENV170105777
CEBV01022010
257972
Bacillota
CGG
Pro
>WENV170106351
CEBV01045424
64854
Bacillota
TAA
Leu
>WENV170106096
CEBV01034700
124618
Bacillota
GAG
Leu
>WENV170105689
CEBV01019274
448255
Bacillota
CTG
Gln
>WENV170105776
CEBV01022010
448255
Bacillota
CTG
Gln
>WENV170106430
CEBV01048851
448255
Bacillota
CTG
Gln
>WENV170105365
CEBV01006567
159234
Bacillota
CAC
Val
>WENV170105601
CEBV01015623
159234
Bacillota
CAC
Val
>WENV170106003
CEBV01031099
159234
Bacillota
CAC
Val
>WENV170105379
CEBV01007435
162688
Bacillota
GAT
Ile
>WENV170106444
CEBV01050050
162688
Bacillota
GAT
Ile
>WENV170106180
CEBV01038383
133221
Bacillota
CAA
Leu
>WENV170105910
CEBV01026678
159237
Bacillota
TCT
Arg
>WENV170106365
CEBV01045941
159237
Bacillota
TCT
Arg
>WENV170105454
CEBV01010124
374673
Bacillota
CTC
Glu
>WENV170105829
CEBV01023123
374673
Bacillota
CTC
Glu
>WENV170105921
CEBV01027253
374673
Bacillota
CTC
Glu
>WENV170105764
CEBV01021351
105206
Bacillota
GTA
Tyr
>WENV170106097
CEBV01034700
131005
Bacillota
TAG
Leu
>WENV170105271
CEBV01001035
369393
Bacillota
TTC
Glu
>WENV170105404
CEBV01008576
369393
Bacillota
TTC
Glu
>WENV170105827
CEBV01023119
369393
Bacillota
TTC
Glu
>WENV170105278
CEBV01001094
293959
Bacillota
GGC
Ala
>WENV170105655
CEBV01017782
293959
Bacillota
GGC
Ala
>WENV170105845
CEBV01023548
293959
Bacillota
GGC
Ala
>WENV170105846
CEBV01023548
293959
Bacillota
GGC
Ala
>WENV170105949
CEBV01028664
64857
Bacillota
TAA
Leu
>WENV170106255
CEBV01041810
64857
Bacillota
TAA
Leu
>WENV170106470
CEBV01050877
369390
Bacillota
TGT
Thr
>WENV170106028
CEBV01032248
166292
Bacillota
GAT
Ile
>WENV170105360
CEBV01005881
11993
Bacillota
GGA
Ser
>WENV170106268
CEBV01042590
11993
Bacillota
GGA
Ser
>WENV170105301
CEBV01003010
277767
Bacillota
CGC
Ala
>WENV170106111
CEBV01035467
64856
Bacillota
CAA
Leu
>WENV170105457
CEBV01010491
131055
Bacillota
TAG
Leu
>WENV170105847
CEBV01023579
131055
Bacillota
TAG
Leu
>WENV170105936
CEBV01027874
49796
Bacillota
TGA
Ser
>WENV170106142
CEBV01037087
49796
Bacillota
TGA
Ser
>WENV170105937
CEBV01027874
5393
Bacillota
GCT
Ser
>WENV170106143
CEBV01037087
5393
Bacillota
GCT
Ser
>WENV170105761
CEBV01021217
5393
Bacillota
GCT
Ser
>WENV170106027
CEBV01032248
320672
Bacillota
TGC
Ala
>WENV170105311
CEBV01003133
448256
Bacillota
TTG
Gln
>WENV170106403
CEBV01047960
448256
Bacillota
TTG
Gln
>WENV170106469
CEBV01050860
448256
Bacillota
TTG
Gln
>WENV170105264
CEBV01000596
167205
Bacillota
TAC
Val
>WENV170106243
CEBV01040828
167205
Bacillota
TAC
Val
>WENV170105967
CEBV01029063
257960
Bacillota
CGC
Ala
>WENV170105962
CEBV01028816
312418
Bacillota
GAA
Phe
>WENV170106063
CEBV01033394
166295
Bacillota
GTT
Asn
>WENV170105613
CEBV01016172
159236
Bacillota
GTT
Asn
>WENV170105976
CEBV01029473
159236
Bacillota
GTT
Asn
>WENV170106152
CEBV01037434
159236
Bacillota
GTT
Asn
>WENV170106329
CEBV01044769
159236
Bacillota
GTT
Asn
>WENV170105437
CEBV01009946
257976
Bacillota
CCC
Gly
>WENV170105935
CEBV01027873
257976
Bacillota
CCC
Gly
>WENV170105775
CEBV01022010
159239
Bacillota
CCT
Arg
>WENV170106043
CEBV01032617
369392
Bacillota
GCA
Cys
>WENV170105581
CEBV01015231
257965
Bacillota
TGG
Pro
>WENV170105821
CEBV01022812
257965
Bacillota
TGG
Pro
>WENV170106184
CEBV01038389
257965
Bacillota
TGG
Pro
>WENV170105376
CEBV01007358
64855
Bacillota
CAG
Leu
>WENV170105724
CEBV01020041
64855
Bacillota
CAG
Leu
>WENV170106179
CEBV01038383
64855
Bacillota
CAG
Leu
>WENV170106366
CEBV01045941
159238
Bacillota
GTG
His
>WENV170105279
CEBV01001094
369391
Bacillota
TCC
Gly
>WENV170106390
CEBV01046854
369391
Bacillota
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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