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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
172 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170105600
CEBV01015589
65518
Bacteroidota
GAG
Leu
>WENV170106012
CEBV01031387
152201
Bacteroidota
TAC
Val
>WENV170106013
CEBV01031387
152201
Bacteroidota
TAC
Val
>WENV170106014
CEBV01031387
152201
Bacteroidota
TAC
Val
>WENV170106237
CEBV01040693
152201
Bacteroidota
TAC
Val
>WENV170106238
CEBV01040693
152201
Bacteroidota
TAC
Val
>WENV170106239
CEBV01040693
152201
Bacteroidota
TAC
Val
>WENV170105268
CEBV01000691
159893
Bacteroidota
TCT
Arg
>WENV170106458
CEBV01050506
65502
Bacteroidota
CAA
Leu
>WENV170105335
CEBV01004637
166871
Bacteroidota
TCT
Arg
>WENV170105955
CEBV01028700
369487
Bacteroidota
>WENV170106252
CEBV01041473
369838
Bacteroidota
CCT
Arg
>WENV170106155
CEBV01037671
448691
Bacteroidota
TTG
Gln
>WENV170105541
CEBV01014392
160436
Bacteroidota
GGC
Ala
>WENV170105619
CEBV01016566
160436
Bacteroidota
GGC
Ala
>WENV170105466
CEBV01010901
23774
Bacteroidota
GGA
Ser
>WENV170105488
CEBV01011670
258780
Bacteroidota
>WENV170105489
CEBV01011670
258780
Bacteroidota
>WENV170105603
CEBV01015705
258780
Bacteroidota
>WENV170105515
CEBV01012853
160416
Bacteroidota
GTG
His
>WENV170105516
CEBV01012853
160416
Bacteroidota
GTG
His
>WENV170106323
CEBV01044455
160416
Bacteroidota
GTG
His
>WENV170105498
CEBV01012114
258777
Bacteroidota
GAA
Phe
>WENV170106198
CEBV01039156
65110
Bacteroidota
CAG
Leu
>WENV170106319
CEBV01044403
49944
Bacteroidota
TAA
Leu
>WENV170105375
CEBV01007076
371226
Bacteroidota
CCT
Arg
>WENV170106313
CEBV01043948
182139
Bacteroidota
CGG
Pro
>WENV170105841
CEBV01023492
139254
Bacteroidota
GAC
Val
>WENV170105973
CEBV01029447
105701
Bacteroidota
TAG
Leu
>WENV170106144
CEBV01037169
105701
Bacteroidota
TAG
Leu
>WENV170105530
CEBV01013254
38349
Bacteroidota
CGA
Ser
>WENV170106005
CEBV01031147
259292
Bacteroidota
CGT
Thr
>WENV170105995
CEBV01030374
76307
Bacteroidota
GAG
Leu
>WENV170106149
CEBV01037411
76307
Bacteroidota
GAG
Leu
>WENV170105431
CEBV01009744
261339
Bacteroidota
CCA
Trp
>WENV170105329
CEBV01004205
101772
Bacteroidota
GTA
Tyr
>WENV170105396
CEBV01008237
101772
Bacteroidota
GTA
Tyr
>WENV170105628
CEBV01016891
101772
Bacteroidota
GTA
Tyr
>WENV170105434
CEBV01009744
105937
Bacteroidota
GTA
Tyr
>WENV170105966
CEBV01029036
50713
Bacteroidota
TGA
Ser
>WENV170105430
CEBV01009744
261338
Bacteroidota
GTT
Asn
>WENV170105405
CEBV01008596
452097
Bacteroidota
CTG
Gln
>WENV170105451
CEBV01010115
24636
Bacteroidota
GGA
Ser
>WENV170105925
CEBV01027489
24636
Bacteroidota
GGA
Ser
>WENV170105562
CEBV01014836
374505
Bacteroidota
CTC
Glu
>WENV170105660
CEBV01018184
374505
Bacteroidota
CTC
Glu
>WENV170105948
CEBV01028290
374505
Bacteroidota
CTC
Glu
>WENV170106358
CEBV01045666
374505
Bacteroidota
CTC
Glu
>WENV170105502
CEBV01012165
154165
Bacteroidota
GGG
Pro
>WENV170105934
CEBV01027861
154165
Bacteroidota
GGG
Pro
>WENV170106187
CEBV01038510
154165
Bacteroidota
GGG
Pro
>WENV170106188
CEBV01038518
154165
Bacteroidota
GGG
Pro
>WENV170106350
CEBV01045156
154165
Bacteroidota
GGG
Pro
>WENV170105956
CEBV01028700
159413
Bacteroidota
>WENV170105957
CEBV01028700
159413
Bacteroidota
>WENV170105789
CEBV01022011
124700
Bacteroidota
>WENV170105792
CEBV01022011
124700
Bacteroidota
>WENV170105795
CEBV01022011
124700
Bacteroidota
>WENV170105798
CEBV01022011
124700
Bacteroidota
>WENV170106172
CEBV01038382
124700
Bacteroidota
>WENV170106175
CEBV01038382
124700
Bacteroidota
>WENV170106177
CEBV01038382
124700
Bacteroidota
>WENV170105512
CEBV01012832
161250
Bacteroidota
GTT
Asn
>WENV170105513
CEBV01012832
161250
Bacteroidota
GTT
Asn
>WENV170105738
CEBV01020502
161250
Bacteroidota
GTT
Asn
>WENV170105739
CEBV01020502
161250
Bacteroidota
GTT
Asn
>WENV170105740
CEBV01020502
161250
Bacteroidota
GTT
Asn
>WENV170105741
CEBV01020502
161250
Bacteroidota
GTT
Asn
>WENV170105742
CEBV01020502
161250
Bacteroidota
GTT
Asn
>WENV170105564
CEBV01014850
238847
Bacteroidota
GGC
Ala
>WENV170105720
CEBV01019693
205503
Bacteroidota
GTG
His
>WENV170105685
CEBV01018921
370133
Bacteroidota
CCG
Arg
>WENV170105848
CEBV01023847
370133
Bacteroidota
CCG
Arg
>WENV170105355
CEBV01005514
105470
Bacteroidota
TAG
Leu
>WENV170106121
CEBV01035795
105470
Bacteroidota
TAG
Leu
>WENV170106140
CEBV01036718
105470
Bacteroidota
TAG
Leu
>WENV170105468
CEBV01010912
207722
Bacteroidota
GTT
Asn
>WENV170105470
CEBV01010912
207722
Bacteroidota
GTT
Asn
>WENV170106389
CEBV01046844
236821
Bacteroidota
>WENV170106384
CEBV01046772
370665
Bacteroidota
CCG
Arg
>WENV170105578
CEBV01014954
52815
Bacteroidota
TAA
Leu
>WENV170105718
CEBV01019680
52815
Bacteroidota
TAA
Leu
>WENV170106066
CEBV01033461
52815
Bacteroidota
TAA
Leu
>WENV170105563
CEBV01014850
322169
Bacteroidota
CCA
Trp
>WENV170106210
CEBV01039842
259289
Bacteroidota
CTC
Glu
>WENV170106432
CEBV01049262
259289
Bacteroidota
CTC
Glu
>WENV170106141
CEBV01036766
261333
Bacteroidota
CCC
Gly
>WENV170106298
CEBV01043189
261333
Bacteroidota
CCC
Gly
>WENV170105495
CEBV01012023
106801
Bacteroidota
CAG
Leu
>WENV170105525
CEBV01013233
24628
Bacteroidota
GGA
Ser
>WENV170106173
CEBV01038382
65114
Bacteroidota
GAG
Leu
>WENV170105610
CEBV01015751
322951
Bacteroidota
TTT
Lys
>WENV170106191
CEBV01038766
322951
Bacteroidota
TTT
Lys
>WENV170105518
CEBV01012873
71334
Bacteroidota
GAG
Leu
>WENV170105882
CEBV01025482
22799
Bacteroidota
GGA
Ser
>WENV170105416
CEBV01008987
259271
Bacteroidota
CTT
Lys
>WENV170105417
CEBV01008987
259271
Bacteroidota
CTT
Lys
>WENV170105497
CEBV01012059
259271
Bacteroidota
CTT
Lys
>WENV170105885
CEBV01025488
276085
Bacteroidota
TTT
Lys
>WENV170105471
CEBV01011197
159953
Bacteroidota
CAT
Met
>WENV170105472
CEBV01011197
159953
Bacteroidota
CAT
Met
>WENV170106454
CEBV01050292
20980
Bacteroidota
GGA
Ser
>WENV170106348
CEBV01045154
49817
Bacteroidota
TGA
Ser
>WENV170105501
CEBV01012165
448605
Bacteroidota
CTG
Gln
>WENV170106007
CEBV01031173
259272
Bacteroidota
CGT
Thr
>WENV170105432
CEBV01009744
449089
Bacteroidota
TTG
Gln
>WENV170105950
CEBV01028698
159415
Bacteroidota
>WENV170105475
CEBV01011278
160434
Bacteroidota
GTG
His
>WENV170105977
CEBV01029478
160434
Bacteroidota
GTG
His
>WENV170105863
CEBV01024364
160417
Bacteroidota
GGC
Ala
>WENV170105269
CEBV01000698
166971
Bacteroidota
>WENV170105421
CEBV01009381
166971
Bacteroidota
>WENV170105905
CEBV01026381
166971
Bacteroidota
>WENV170106047
CEBV01032760
449090
Bacteroidota
CTG
Gln
>WENV170106048
CEBV01032760
449090
Bacteroidota
CTG
Gln
>WENV170106049
CEBV01032760
449090
Bacteroidota
CTG
Gln
>WENV170106050
CEBV01032760
449090
Bacteroidota
CTG
Gln
>WENV170106316
CEBV01044400
449090
Bacteroidota
CTG
Gln
>WENV170105743
CEBV01020506
307992
Bacteroidota
GAA
Phe
>WENV170106088
CEBV01034246
24259
Bacteroidota
GGA
Ser
>WENV170106201
CEBV01039460
24259
Bacteroidota
GGA
Ser
>WENV170105658
CEBV01018171
58386
Bacteroidota
TGA
Ser
>WENV170105787
CEBV01022011
58386
Bacteroidota
TGA
Ser
>WENV170105852
CEBV01023922
58386
Bacteroidota
TGA
Ser
>WENV170105853
CEBV01023922
58386
Bacteroidota
TGA
Ser
>WENV170105878
CEBV01025113
58386
Bacteroidota
TGA
Ser
>WENV170105907
CEBV01026457
58386
Bacteroidota
TGA
Ser
>WENV170105975
CEBV01029471
58386
Bacteroidota
TGA
Ser
>WENV170105980
CEBV01029886
58386
Bacteroidota
TGA
Ser
>WENV170106056
CEBV01032953
58386
Bacteroidota
TGA
Ser
>WENV170106362
CEBV01045903
58386
Bacteroidota
TGA
Ser
>WENV170106421
CEBV01048350
58386
Bacteroidota
TGA
Ser
>WENV170105332
CEBV01004237
261335
Bacteroidota
TTT
Lys
>WENV170105485
CEBV01011325
261335
Bacteroidota
TTT
Lys
>WENV170105876
CEBV01024968
166972
Bacteroidota
TGT
Thr
>WENV170105291
CEBV01002264
216052
Bacteroidota
TCT
Arg
>WENV170106215
CEBV01039946
139253
Bacteroidota
GGG
Pro
>WENV170105400
CEBV01008361
162594
Bacteroidota
GGC
Ala
>WENV170106150
CEBV01037412
90587
Bacteroidota
TAG
Leu
>WENV170105527
CEBV01013234
414074
Bacteroidota
>WENV170105629
CEBV01016896
414074
Bacteroidota
>WENV170105803
CEBV01022029
414074
Bacteroidota
>WENV170105804
CEBV01022029
414074
Bacteroidota
>WENV170105429
CEBV01009744
261337
Bacteroidota
>WENV170106282
CEBV01042722
293859
Bacteroidota
CCA
Trp
>WENV170105353
CEBV01005455
193541
Bacteroidota
GTT
Asn
>WENV170105354
CEBV01005455
193541
Bacteroidota
GTT
Asn
>WENV170105865
CEBV01024399
193541
Bacteroidota
GTT
Asn
>WENV170105866
CEBV01024399
193541
Bacteroidota
GTT
Asn
>WENV170105443
CEBV01010110
160459
Bacteroidota
GGC
Ala
>WENV170106024
CEBV01031917
160459
Bacteroidota
GGC
Ala
>WENV170106427
CEBV01048459
160415
Bacteroidota
TCT
Arg
>WENV170105455
CEBV01010197
448601
Bacteroidota
TTG
Gln
>WENV170105618
CEBV01016520
448601
Bacteroidota
TTG
Gln
>WENV170105838
CEBV01023224
448601
Bacteroidota
TTG
Gln
>WENV170105433
CEBV01009744
371225
Bacteroidota
TTC
Glu
>WENV170105854
CEBV01023922
261432
Bacteroidota
CCA
Trp
>WENV170105954
CEBV01028698
261432
Bacteroidota
CCA
Trp
>WENV170105686
CEBV01018938
324834
Bacteroidota
CCC
Gly
>WENV170105958
CEBV01028700
113804
Bacteroidota
CAA
Leu
>WENV170105637
CEBV01017020
18452
Bacteroidota
GGA
Ser
>WENV170106004
CEBV01031106
160435
Bacteroidota
GGC
Ala
>WENV170106302
CEBV01043295
160435
Bacteroidota
GGC
Ala
>WENV170106095
CEBV01034688
371314
Bacteroidota
GCA
Cys
>WENV170106331
CEBV01044826
371314
Bacteroidota
GCA
Cys
>WENV170106315
CEBV01044395
410456
Bacteroidota
CCC
Gly
>WENV170105313
CEBV01003394
410456
Bacteroidota
CCC
Gly
>WENV170105397
CEBV01008253
105282
Bacteroidota
TAG
Leu
>WENV170105711
CEBV01019674
105282
Bacteroidota
TAG
Leu
>WENV170106267
CEBV01042477
278748
Bacteroidota
CCC
Gly
>WENV170105283
CEBV01001552
28588
Bacteroidota
GCT
Ser
>WENV170105538
CEBV01014061
261340
Bacteroidota
CTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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