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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
8 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170111987
CEGC01000373
169570
Alphaproteobacteria
GAT
Ile
>WENV170112077
CEGC01017092
383423
Alphaproteobacteria
GAC
Val
>WENV170112013
CEGC01000955
33043
Alphaproteobacteria
CGA
Ser
>WENV170111995
CEGC01000442
188839
Alphaproteobacteria
GGG
Pro
>WENV170112036
CEGC01002091
258701
Alphaproteobacteria
TTT
Lys
>WENV170111979
CEGC01000153
374019
Alphaproteobacteria
GAC
Val
>WENV170112014
CEGC01000960
275379
Alphaproteobacteria
CGC
Ala
>WENV170111969
CEGC01000032
160648
Alphaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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