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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
87 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170112688
CEGF01014569
261991
Gammaproteobacteria
TTT
Lys
>WENV170112650
CEGF01009098
64904
Gammaproteobacteria
CAA
Leu
>WENV170112631
CEGF01007987
188985
Gammaproteobacteria
CAT
Met
>WENV170112633
CEGF01007987
188985
Gammaproteobacteria
CAT
Met
>WENV170112637
CEGF01008372
188985
Gammaproteobacteria
CAT
Met
>WENV170112639
CEGF01008372
188985
Gammaproteobacteria
CAT
Met
>WENV170112546
CEGF01002734
191632
Gammaproteobacteria
>WENV170112576
CEGF01004167
466478
Gammaproteobacteria
GCA
Cys
>WENV170112624
CEGF01007486
307335
Gammaproteobacteria
TGT
Thr
>WENV170112568
CEGF01003853
68241
Gammaproteobacteria
CAG
Leu
>WENV170112569
CEGF01003853
68241
Gammaproteobacteria
CAG
Leu
>WENV170112501
CEGF01001753
161515
Gammaproteobacteria
CCG
Arg
>WENV170112588
CEGF01005255
370729
Gammaproteobacteria
CTG
Gln
>WENV170112634
CEGF01007987
370729
Gammaproteobacteria
CTG
Gln
>WENV170112640
CEGF01008372
370729
Gammaproteobacteria
CTG
Gln
>WENV170112595
CEGF01005582
160126
Gammaproteobacteria
CAT
Met
>WENV170112524
CEGF01002341
64907
Gammaproteobacteria
GAG
Leu
>WENV170112678
CEGF01011851
64907
Gammaproteobacteria
GAG
Leu
>WENV170112481
CEGF01000981
312456
Gammaproteobacteria
TGC
Ala
>WENV170112626
CEGF01007486
369947
Gammaproteobacteria
TCC
Gly
>WENV170112573
CEGF01004151
282403
Gammaproteobacteria
TTT
Lys
>WENV170112574
CEGF01004151
282403
Gammaproteobacteria
TTT
Lys
>WENV170112589
CEGF01005282
125783
Gammaproteobacteria
GTA
Tyr
>WENV170112689
CEGF01014612
125783
Gammaproteobacteria
GTA
Tyr
>WENV170112531
CEGF01002563
260947
Gammaproteobacteria
TTG
Gln
>WENV170112540
CEGF01002690
370515
Gammaproteobacteria
GTG
His
>WENV170112694
CEGF01015424
474505
Gammaproteobacteria
GCA
Cys
>WENV170112683
CEGF01012714
261282
Gammaproteobacteria
TAC
Val
>WENV170112478
CEGF01000890
9771
Gammaproteobacteria
GCT
Ser
>WENV170112612
CEGF01006601
159506
Gammaproteobacteria
CCG
Arg
>WENV170112613
CEGF01006602
159506
Gammaproteobacteria
CCG
Arg
>WENV170112482
CEGF01001035
260453
Gammaproteobacteria
GTT
Asn
>WENV170112483
CEGF01001035
260453
Gammaproteobacteria
GTT
Asn
>WENV170112687
CEGF01014180
263086
Gammaproteobacteria
GTT
Asn
>WENV170112584
CEGF01005020
126541
Gammaproteobacteria
GTA
Tyr
>WENV170112691
CEGF01014996
256945
Gammaproteobacteria
GAA
Phe
>WENV170112516
CEGF01002036
124716
Gammaproteobacteria
GTA
Tyr
>WENV170112623
CEGF01007485
113788
Gammaproteobacteria
GTA
Tyr
>WENV170112625
CEGF01007486
113788
Gammaproteobacteria
GTA
Tyr
>WENV170112614
CEGF01006660
159505
Gammaproteobacteria
CGG
Pro
>WENV170112615
CEGF01007179
10504
Gammaproteobacteria
GCT
Ser
>WENV170112660
CEGF01009926
10504
Gammaproteobacteria
GCT
Ser
>WENV170112698
CEGF01016376
262291
Gammaproteobacteria
TTC
Glu
>WENV170112599
CEGF01005582
77390
Gammaproteobacteria
CAG
Leu
>WENV170112567
CEGF01003776
189269
Gammaproteobacteria
CGG
Pro
>WENV170112492
CEGF01001358
170513
Gammaproteobacteria
GAC
Val
>WENV170112654
CEGF01009207
170513
Gammaproteobacteria
GAC
Val
>WENV170112676
CEGF01011775
170513
Gammaproteobacteria
GAC
Val
>WENV170112563
CEGF01003581
105274
Gammaproteobacteria
TAG
Leu
>WENV170112635
CEGF01008118
105274
Gammaproteobacteria
TAG
Leu
>WENV170112503
CEGF01001912
189268
Gammaproteobacteria
CCT
Arg
>WENV170112583
CEGF01004988
260455
Gammaproteobacteria
TAC
Val
>WENV170112618
CEGF01007191
260455
Gammaproteobacteria
TAC
Val
>WENV170112451
CEGF01000143
318954
Gammaproteobacteria
TTC
Glu
>WENV170112462
CEGF01000360
318954
Gammaproteobacteria
TTC
Glu
>WENV170112475
CEGF01000884
64905
Gammaproteobacteria
TAA
Leu
>WENV170112653
CEGF01009125
64905
Gammaproteobacteria
TAA
Leu
>WENV170112513
CEGF01002035
162062
Gammaproteobacteria
TCT
Arg
>WENV170112522
CEGF01002340
65495
Gammaproteobacteria
GAG
Leu
>WENV170112458
CEGF01000360
291145
Gammaproteobacteria
TTC
Glu
>WENV170112460
CEGF01000360
291145
Gammaproteobacteria
TTC
Glu
>WENV170112596
CEGF01005582
105406
Gammaproteobacteria
TAG
Leu
>WENV170112471
CEGF01000804
182090
Gammaproteobacteria
GGG
Pro
>WENV170112547
CEGF01002743
182090
Gammaproteobacteria
GGG
Pro
>WENV170112541
CEGF01002695
159512
Gammaproteobacteria
GGG
Pro
>WENV170112597
CEGF01005582
369946
Gammaproteobacteria
TTG
Gln
>WENV170112598
CEGF01005582
369946
Gammaproteobacteria
TTG
Gln
>WENV170112620
CEGF01007239
160116
Gammaproteobacteria
GAC
Val
>WENV170112499
CEGF01001682
159511
Gammaproteobacteria
CCT
Arg
>WENV170112680
CEGF01012000
159511
Gammaproteobacteria
CCT
Arg
>WENV170112681
CEGF01012509
159511
Gammaproteobacteria
CCT
Arg
>WENV170112692
CEGF01015028
159511
Gammaproteobacteria
CCT
Arg
>WENV170112538
CEGF01002690
159514
Gammaproteobacteria
TCT
Arg
>WENV170112587
CEGF01005245
191341
Gammaproteobacteria
CAT
Met
>WENV170112560
CEGF01003495
448350
Gammaproteobacteria
TCC
Gly
>WENV170112561
CEGF01003495
369546
Gammaproteobacteria
GGT
Thr
>WENV170112557
CEGF01003276
220289
Gammaproteobacteria
CAT
Met
>WENV170112558
CEGF01003293
220289
Gammaproteobacteria
CAT
Met
>WENV170112593
CEGF01005580
220289
Gammaproteobacteria
CAT
Met
>WENV170112594
CEGF01005581
220289
Gammaproteobacteria
CAT
Met
>WENV170112489
CEGF01001241
159507
Gammaproteobacteria
GTC
Asp
>WENV170112491
CEGF01001241
159507
Gammaproteobacteria
GTC
Asp
>WENV170112647
CEGF01008923
159507
Gammaproteobacteria
GTC
Asp
>WENV170112649
CEGF01008923
159507
Gammaproteobacteria
GTC
Asp
>WENV170112665
CEGF01010476
159507
Gammaproteobacteria
GTC
Asp
>WENV170112666
CEGF01010476
159507
Gammaproteobacteria
GTC
Asp
>WENV170112668
CEGF01010476
159507
Gammaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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