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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170116817
CENH01025764
256881
Gammaproteobacteria
GTG
His
>WENV170116736
CENH01006382
18367
Gammaproteobacteria
GCT
Ser
>WENV170116783
CENH01016653
291146
Gammaproteobacteria
GTT
Asn
>WENV170116690
CENH01000043
172986
Gammaproteobacteria
CCA
Trp
>WENV170116741
CENH01007004
172986
Gammaproteobacteria
CCA
Trp
>WENV170116802
CENH01023132
172986
Gammaproteobacteria
CCA
Trp
>WENV170116837
CENH01028149
448070
Gammaproteobacteria
GCA
Cys
>WENV170116806
CENH01024513
449061
Gammaproteobacteria
TCC
Gly
>WENV170116737
CENH01006382
188594
Gammaproteobacteria
ACG
Arg
>WENV170116738
CENH01006382
188594
Gammaproteobacteria
ACG
Arg
>WENV170116818
CENH01025764
106574
Gammaproteobacteria
TAG
Leu
>WENV170116822
CENH01026548
290512
Gammaproteobacteria
TGT
Thr
>WENV170116789
CENH01018819
26256
Gammaproteobacteria
CGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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