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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170119136
CENJ01115078
260225
Alphaproteobacteria
GTT
Asn
>WENV170118600
CENJ01076747
214179
Alphaproteobacteria
CCT
Arg
>WENV170120058
CENJ01173588
396582
Alphaproteobacteria
GAC
Val
>WENV170117424
CENJ01011269
179198
Alphaproteobacteria
GTC
Asp
>WENV170118351
CENJ01060804
179198
Alphaproteobacteria
GTC
Asp
>WENV170117339
CENJ01006801
167093
Alphaproteobacteria
GTC
Asp
>WENV170119188
CENJ01119502
380306
Alphaproteobacteria
GGT
Thr
>WENV170118710
CENJ01084406
65727
Alphaproteobacteria
GAG
Leu
>WENV170119372
CENJ01136105
259585
Alphaproteobacteria
CCA
Trp
>WENV170118021
CENJ01041988
159552
Alphaproteobacteria
TGG
Pro
>WENV170117426
CENJ01011269
448621
Alphaproteobacteria
GCA
Cys
>WENV170118353
CENJ01060804
448621
Alphaproteobacteria
GCA
Cys
>WENV170117879
CENJ01034945
32838
Alphaproteobacteria
GCT
Ser
>WENV170117536
CENJ01016160
309312
Alphaproteobacteria
TGC
Ala
>WENV170120368
CENJ01294405
409499
Alphaproteobacteria
TTG
Gln
>WENV170119198
CENJ01119969
159282
Alphaproteobacteria
TCT
Arg
>WENV170118165
CENJ01048181
177263
Alphaproteobacteria
ACG
Arg
>WENV170117779
CENJ01029037
392647
Alphaproteobacteria
GGT
Thr
>WENV170117975
CENJ01039982
393349
Alphaproteobacteria
GGT
Thr
>WENV170119477
CENJ01145448
77637
Alphaproteobacteria
TAA
Leu
>WENV170120525
CENJ01330188
462157
Alphaproteobacteria
TCC
Gly
>WENV170120200
CENJ01218808
451392
Alphaproteobacteria
TCC
Gly
>WENV170120011
CENJ01172859
369860
Alphaproteobacteria
TTG
Gln
>WENV170117802
CENJ01030302
406362
Alphaproteobacteria
GAA
Phe
>WENV170119587
CENJ01153111
406362
Alphaproteobacteria
GAA
Phe
>WENV170119920
CENJ01170169
406362
Alphaproteobacteria
GAA
Phe
>WENV170117547
CENJ01016561
397793
Alphaproteobacteria
GCC
Gly
>WENV170118933
CENJ01099842
274512
Alphaproteobacteria
CCA
Trp
>WENV170118138
CENJ01047077
171458
Alphaproteobacteria
TCT
Arg
>WENV170119428
CENJ01141279
171458
Alphaproteobacteria
TCT
Arg
>WENV170117572
CENJ01017503
166599
Alphaproteobacteria
CAT
Met
>WENV170117811
CENJ01031165
166599
Alphaproteobacteria
CAT
Met
>WENV170119129
CENJ01114527
166599
Alphaproteobacteria
CAT
Met
>WENV170117987
CENJ01040409
377113
Alphaproteobacteria
GAC
Val
>WENV170118473
CENJ01068394
159474
Alphaproteobacteria
ACG
Arg
>WENV170117590
CENJ01018499
369406
Alphaproteobacteria
GAC
Val
>WENV170118115
CENJ01045548
205335
Alphaproteobacteria
GGG
Pro
>WENV170117579
CENJ01018121
372766
Alphaproteobacteria
TTG
Gln
>WENV170119861
CENJ01167789
391624
Alphaproteobacteria
TTG
Gln
>WENV170120411
CENJ01309652
209273
Alphaproteobacteria
GTG
His
>WENV170118403
CENJ01064556
205700
Alphaproteobacteria
CCG
Arg
>WENV170118369
CENJ01061743
302408
Alphaproteobacteria
GAA
Phe
>WENV170119366
CENJ01135437
302408
Alphaproteobacteria
GAA
Phe
>WENV170118605
CENJ01076948
200021
Alphaproteobacteria
CCG
Arg
>WENV170120204
CENJ01222050
453947
Alphaproteobacteria
GCA
Cys
>WENV170117440
CENJ01011910
88722
Alphaproteobacteria
CAG
Leu
>WENV170118364
CENJ01061450
163875
Alphaproteobacteria
ACG
Arg
>WENV170118817
CENJ01091038
219821
Alphaproteobacteria
GTG
His
>WENV170119903
CENJ01169411
219821
Alphaproteobacteria
GTG
His
>WENV170120228
CENJ01235884
175700
Alphaproteobacteria
TGG
Pro
>WENV170118802
CENJ01090177
449739
Alphaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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