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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
88 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170120497
CENJ01327072
277731
Bacteroidota
>WENV170117308
CENJ01004512
165596
Bacteroidota
GGC
Ala
>WENV170119223
CENJ01122634
165596
Bacteroidota
GGC
Ala
>WENV170118260
CENJ01054743
260563
Bacteroidota
>WENV170117994
CENJ01040622
139505
Bacteroidota
TAC
Val
>WENV170118409
CENJ01064665
139505
Bacteroidota
TAC
Val
>WENV170118899
CENJ01097657
139505
Bacteroidota
TAC
Val
>WENV170119175
CENJ01118565
139505
Bacteroidota
TAC
Val
>WENV170119909
CENJ01169710
139505
Bacteroidota
TAC
Val
>WENV170118631
CENJ01078411
116954
Bacteroidota
TAG
Leu
>WENV170117690
CENJ01024060
410439
Bacteroidota
GGT
Thr
>WENV170117894
CENJ01035571
211884
Bacteroidota
TGC
Ala
>WENV170118107
CENJ01045066
211884
Bacteroidota
TGC
Ala
>WENV170118665
CENJ01081272
211884
Bacteroidota
TGC
Ala
>WENV170118729
CENJ01085607
211884
Bacteroidota
TGC
Ala
>WENV170120457
CENJ01320655
27615
Bacteroidota
GGA
Ser
>WENV170117295
CENJ01003477
57357
Bacteroidota
TGA
Ser
>WENV170117676
CENJ01022795
57357
Bacteroidota
TGA
Ser
>WENV170118717
CENJ01084894
57357
Bacteroidota
TGA
Ser
>WENV170118796
CENJ01089854
57357
Bacteroidota
TGA
Ser
>WENV170118878
CENJ01095684
57357
Bacteroidota
TGA
Ser
>WENV170118944
CENJ01100574
57357
Bacteroidota
TGA
Ser
>WENV170119663
CENJ01158710
57357
Bacteroidota
TGA
Ser
>WENV170120255
CENJ01252963
448470
Bacteroidota
GCA
Cys
>WENV170119014
CENJ01105456
258133
Bacteroidota
>WENV170118101
CENJ01045005
200621
Bacteroidota
TGT
Thr
>WENV170117481
CENJ01013143
50019
Bacteroidota
TGA
Ser
>WENV170119620
CENJ01155497
385890
Bacteroidota
TTC
Glu
>WENV170117631
CENJ01020383
310696
Bacteroidota
CCA
Trp
>WENV170119869
CENJ01168176
21418
Bacteroidota
GGA
Ser
>WENV170117666
CENJ01022434
49783
Bacteroidota
TGA
Ser
>WENV170117675
CENJ01022779
177164
Bacteroidota
GTC
Asp
>WENV170117716
CENJ01025836
177164
Bacteroidota
GTC
Asp
>WENV170118060
CENJ01043785
177164
Bacteroidota
GTC
Asp
>WENV170118192
CENJ01050168
177164
Bacteroidota
GTC
Asp
>WENV170118925
CENJ01099259
177164
Bacteroidota
GTC
Asp
>WENV170119454
CENJ01143440
177164
Bacteroidota
GTC
Asp
>WENV170118414
CENJ01064812
138967
Bacteroidota
TGG
Pro
>WENV170117791
CENJ01029510
143948
Bacteroidota
TGG
Pro
>WENV170118577
CENJ01074778
143948
Bacteroidota
TGG
Pro
>WENV170117285
CENJ01002968
188048
Bacteroidota
GGC
Ala
>WENV170117797
CENJ01030097
188048
Bacteroidota
GGC
Ala
>WENV170118195
CENJ01050626
188048
Bacteroidota
GGC
Ala
>WENV170119008
CENJ01105155
188048
Bacteroidota
GGC
Ala
>WENV170119525
CENJ01148613
188048
Bacteroidota
GGC
Ala
>WENV170118885
CENJ01096415
257687
Bacteroidota
TTT
Lys
>WENV170117714
CENJ01025797
144149
Bacteroidota
TGG
Pro
>WENV170118054
CENJ01043654
144149
Bacteroidota
TGG
Pro
>WENV170118227
CENJ01051874
144149
Bacteroidota
TGG
Pro
>WENV170118517
CENJ01071155
144149
Bacteroidota
TGG
Pro
>WENV170118683
CENJ01082615
263162
Bacteroidota
GGG
Pro
>WENV170119153
CENJ01116560
263162
Bacteroidota
GGG
Pro
>WENV170119567
CENJ01151335
263162
Bacteroidota
GGG
Pro
>WENV170117992
CENJ01040594
321470
Bacteroidota
GAA
Phe
>WENV170118191
CENJ01050168
321470
Bacteroidota
GAA
Phe
>WENV170118271
CENJ01055757
321470
Bacteroidota
GAA
Phe
>WENV170119009
CENJ01105200
321470
Bacteroidota
GAA
Phe
>WENV170120107
CENJ01174086
307992
Bacteroidota
GAA
Phe
>WENV170119140
CENJ01115578
370083
Bacteroidota
TTC
Glu
>WENV170117836
CENJ01032786
71400
Bacteroidota
GCT
Ser
>WENV170119376
CENJ01136814
71400
Bacteroidota
GCT
Ser
>WENV170117812
CENJ01031258
168483
Bacteroidota
GTT
Asn
>WENV170118691
CENJ01083503
168483
Bacteroidota
GTT
Asn
>WENV170118898
CENJ01097572
263886
Bacteroidota
TTG
Gln
>WENV170119473
CENJ01145228
263886
Bacteroidota
TTG
Gln
>WENV170117544
CENJ01016425
22472
Bacteroidota
GGA
Ser
>WENV170117384
CENJ01009398
310118
Bacteroidota
CCA
Trp
>WENV170117404
CENJ01010188
310118
Bacteroidota
CCA
Trp
>WENV170117415
CENJ01010762
310118
Bacteroidota
CCA
Trp
>WENV170117520
CENJ01015154
310118
Bacteroidota
CCA
Trp
>WENV170117733
CENJ01026716
310118
Bacteroidota
CCA
Trp
>WENV170117813
CENJ01031267
310118
Bacteroidota
CCA
Trp
>WENV170117933
CENJ01037421
310118
Bacteroidota
CCA
Trp
>WENV170118155
CENJ01047789
310118
Bacteroidota
CCA
Trp
>WENV170119211
CENJ01120695
310118
Bacteroidota
CCA
Trp
>WENV170119212
CENJ01120696
310118
Bacteroidota
CCA
Trp
>WENV170119315
CENJ01131547
310118
Bacteroidota
CCA
Trp
>WENV170118884
CENJ01096359
114734
Bacteroidota
TAG
Leu
>WENV170117995
CENJ01040654
188006
Bacteroidota
TCT
Arg
>WENV170119980
CENJ01172209
18750
Bacteroidota
GGA
Ser
>WENV170118745
CENJ01086877
158985
Bacteroidota
GTC
Asp
>WENV170117330
CENJ01006090
311172
Bacteroidota
GAA
Phe
>WENV170118440
CENJ01066278
301008
Bacteroidota
TTG
Gln
>WENV170117896
CENJ01035618
68352
Bacteroidota
GCT
Ser
>WENV170120341
CENJ01288805
390361
Bacteroidota
CCT
Arg
>WENV170118073
CENJ01044100
139231
Bacteroidota
GAC
Val
>WENV170119410
CENJ01140122
139231
Bacteroidota
GAC
Val
>WENV170118753
CENJ01087255
169560
Bacteroidota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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