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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170117752
CENJ01027728
323812
Cyanobacteriota
GGC
Ala
>WENV170119250
CENJ01125730
323812
Cyanobacteriota
GGC
Ala
>WENV170120000
CENJ01172732
323812
Cyanobacteriota
GGC
Ala
>WENV170119442
CENJ01142436
400868
Cyanobacteriota
TTG
Gln
>WENV170119674
CENJ01159190
400868
Cyanobacteriota
TTG
Gln
>WENV170118089
CENJ01044701
160110
Cyanobacteriota
CCG
Arg
>WENV170119232
CENJ01123993
160110
Cyanobacteriota
CCG
Arg
>WENV170118347
CENJ01060690
161770
Cyanobacteriota
TCT
Arg
>WENV170119128
CENJ01114406
161770
Cyanobacteriota
TCT
Arg
>WENV170119935
CENJ01170497
161770
Cyanobacteriota
TCT
Arg
>WENV170118512
CENJ01070883
182044
Cyanobacteriota
GTC
Asp
>WENV170119712
CENJ01160821
182044
Cyanobacteriota
GTC
Asp
>WENV170118185
CENJ01049725
302627
Cyanobacteriota
GGC
Ala
>WENV170120446
CENJ01318626
160107
Cyanobacteriota
CAT
Met
>WENV170119133
CENJ01114801
50867
Cyanobacteriota
TGA
Ser
>WENV170118415
CENJ01064827
206157
Cyanobacteriota
CCG
Arg
>WENV170119711
CENJ01160821
258993
Cyanobacteriota
CCA
Trp
>WENV170120293
CENJ01269625
161771
Cyanobacteriota
CAT
Met
>WENV170119148
CENJ01116289
258996
Cyanobacteriota
GTG
His
>WENV170119827
CENJ01166158
258996
Cyanobacteriota
GTG
His
>WENV170118146
CENJ01047376
210553
Cyanobacteriota
CCG
Arg
>WENV170118825
CENJ01091554
114789
Cyanobacteriota
TAG
Leu
>WENV170119849
CENJ01167154
369944
Cyanobacteriota
GAC
Val
>WENV170117989
CENJ01040461
161725
Cyanobacteriota
TCT
Arg
>WENV170118757
CENJ01087631
28527
Cyanobacteriota
CGA
Ser
>WENV170118762
CENJ01087912
28527
Cyanobacteriota
CGA
Ser
>WENV170120049
CENJ01173471
171254
Cyanobacteriota
>WENV170119224
CENJ01123010
369938
Cyanobacteriota
GTT
Asn
>WENV170120206
CENJ01223958
298990
Cyanobacteriota
CCA
Trp
>WENV170120290
CENJ01269223
160106
Cyanobacteriota
TCT
Arg
>WENV170118852
CENJ01093653
260659
Cyanobacteriota
GGC
Ala
>WENV170117246
CENJ01000068
370922
Cyanobacteriota
GAC
Val
>WENV170117523
CENJ01015476
65386
Cyanobacteriota
CAG
Leu
>WENV170118650
CENJ01080334
65386
Cyanobacteriota
CAG
Leu
>WENV170118655
CENJ01080690
65386
Cyanobacteriota
CAG
Leu
>WENV170118435
CENJ01066007
406747
Cyanobacteriota
TGT
Thr
>WENV170118692
CENJ01083507
105814
Cyanobacteriota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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