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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170118897
CENJ01097513
196239
Gammaproteobacteria
TCT
Arg
>WENV170117869
CENJ01034453
277410
Gammaproteobacteria
TTT
Lys
>WENV170119819
CENJ01165820
205994
Gammaproteobacteria
>WENV170118005
CENJ01041079
309075
Gammaproteobacteria
GTT
Asn
>WENV170118526
CENJ01071768
451765
Gammaproteobacteria
GCA
Cys
>WENV170119116
CENJ01113180
451765
Gammaproteobacteria
GCA
Cys
>WENV170119143
CENJ01115973
451765
Gammaproteobacteria
GCA
Cys
>WENV170118630
CENJ01078398
265552
Gammaproteobacteria
GTG
His
>WENV170119780
CENJ01163910
261853
Gammaproteobacteria
GTT
Asn
>WENV170117771
CENJ01028776
458882
Gammaproteobacteria
GCA
Cys
>WENV170119074
CENJ01109516
262285
Gammaproteobacteria
TGC
Ala
>WENV170118775
CENJ01088803
262285
Gammaproteobacteria
TGC
Ala
>WENV170119374
CENJ01136673
319314
Gammaproteobacteria
TGT
Thr
>WENV170117500
CENJ01014199
305458
Gammaproteobacteria
TAC
Val
>WENV170118505
CENJ01070029
206655
Gammaproteobacteria
GTC
Asp
>WENV170120254
CENJ01252486
71882
Gammaproteobacteria
TAA
Leu
>WENV170117868
CENJ01034447
65736
Gammaproteobacteria
TAA
Leu
>WENV170118032
CENJ01042542
65736
Gammaproteobacteria
TAA
Leu
>WENV170119052
CENJ01107923
65736
Gammaproteobacteria
TAA
Leu
>WENV170120055
CENJ01173564
65736
Gammaproteobacteria
TAA
Leu
>WENV170119937
CENJ01170735
21308
Gammaproteobacteria
GGA
Ser
>WENV170119958
CENJ01171530
451853
Gammaproteobacteria
GCA
Cys
>WENV170118474
CENJ01068593
325641
Gammaproteobacteria
CCA
Trp
>WENV170119312
CENJ01131420
164285
Gammaproteobacteria
TCG
Arg
>WENV170117709
CENJ01025426
263086
Gammaproteobacteria
GTT
Asn
>WENV170120119
CENJ01184092
272540
Gammaproteobacteria
GTT
Asn
>WENV170117919
CENJ01036509
316791
Gammaproteobacteria
GAA
Phe
>WENV170119172
CENJ01118139
316791
Gammaproteobacteria
GAA
Phe
>WENV170117447
CENJ01012203
448815
Gammaproteobacteria
TCC
Gly
>WENV170119787
CENJ01164000
172910
Gammaproteobacteria
CCT
Arg
>WENV170119065
CENJ01108822
181298
Gammaproteobacteria
>WENV170117661
CENJ01022257
76183
Gammaproteobacteria
TAA
Leu
>WENV170118811
CENJ01090734
257590
Gammaproteobacteria
GGT
Thr
>WENV170118298
CENJ01057259
260105
Gammaproteobacteria
TTT
Lys
>WENV170118590
CENJ01076096
171915
Gammaproteobacteria
GAC
Val
>WENV170119755
CENJ01162983
214281
Gammaproteobacteria
ACG
Arg
>WENV170119600
CENJ01153987
50028
Gammaproteobacteria
GGA
Ser
>WENV170118527
CENJ01071976
161938
Gammaproteobacteria
CGG
Pro
>WENV170118160
CENJ01047879
275207
Gammaproteobacteria
GGT
Thr
>WENV170117909
CENJ01036069
105812
Gammaproteobacteria
GTA
Tyr
>WENV170118661
CENJ01081223
263987
Gammaproteobacteria
TTT
Lys
>WENV170117637
CENJ01020736
265381
Gammaproteobacteria
GTT
Asn
>WENV170117605
CENJ01019697
64842
Gammaproteobacteria
CAA
Leu
>WENV170117876
CENJ01034735
449736
Gammaproteobacteria
GCA
Cys
>WENV170119144
CENJ01116030
449736
Gammaproteobacteria
GCA
Cys
>WENV170119993
CENJ01172622
449736
Gammaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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