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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170120813
CENL01006031
171117
Alphaproteobacteria
>WENV170121125
CENL01052501
275643
Alphaproteobacteria
TTT
Lys
>WENV170121164
CENL01054539
380834
Alphaproteobacteria
GAA
Phe
>WENV170120770
CENL01002254
167093
Alphaproteobacteria
GTC
Asp
>WENV170121067
CENL01043748
167093
Alphaproteobacteria
GTC
Asp
>WENV170121094
CENL01049333
28104
Alphaproteobacteria
TGA
Ser
>WENV170120874
CENL01013669
448621
Alphaproteobacteria
GCA
Cys
>WENV170121048
CENL01041134
125595
Alphaproteobacteria
>WENV170121124
CENL01052500
74611
Alphaproteobacteria
CAG
Leu
>WENV170120842
CENL01009132
26668
Alphaproteobacteria
GCT
Ser
>WENV170120961
CENL01029054
26668
Alphaproteobacteria
GCT
Ser
>WENV170120815
CENL01006180
8431
Alphaproteobacteria
GCT
Ser
>WENV170121166
CENL01054551
448267
Alphaproteobacteria
GCA
Cys
>WENV170120994
CENL01034851
77637
Alphaproteobacteria
TAA
Leu
>WENV170121157
CENL01054280
159287
Alphaproteobacteria
CGG
Pro
>WENV170121313
CENL01105042
258701
Alphaproteobacteria
TTT
Lys
>WENV170121041
CENL01040399
370458
Alphaproteobacteria
GGT
Thr
>WENV170120845
CENL01009327
395582
Alphaproteobacteria
CTC
Glu
>WENV170121049
CENL01041307
395582
Alphaproteobacteria
CTC
Glu
>WENV170121081
CENL01046397
171458
Alphaproteobacteria
TCT
Arg
>WENV170120928
CENL01024447
406246
Alphaproteobacteria
GCC
Gly
>WENV170121105
CENL01050543
162215
Alphaproteobacteria
ACG
Arg
>WENV170121123
CENL01052206
317132
Alphaproteobacteria
CGC
Ala
>WENV170120924
CENL01024042
26352
Alphaproteobacteria
GGA
Ser
>WENV170120967
CENL01030328
105591
Alphaproteobacteria
GTA
Tyr
>WENV170121270
CENL01094544
26118
Alphaproteobacteria
TGA
Ser
>WENV170120843
CENL01009181
382308
Alphaproteobacteria
GAA
Phe
>WENV170121040
CENL01040323
178940
Alphaproteobacteria
GGG
Pro
>WENV170120889
CENL01016012
262836
Alphaproteobacteria
TAC
Val
>WENV170120879
CENL01014402
161006
Alphaproteobacteria
TGG
Pro
>WENV170121054
CENL01043378
115561
Alphaproteobacteria
TAA
Leu
>WENV170120923
CENL01023837
219821
Alphaproteobacteria
GTG
His
>WENV170121078
CENL01046152
175700
Alphaproteobacteria
TGG
Pro
>WENV170121261
CENL01090278
323860
Alphaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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