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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170121291
CENL01099076
448974
Gammaproteobacteria
GCA
Cys
>WENV170121237
CENL01077563
309836
Gammaproteobacteria
TTC
Glu
>WENV170121234
CENL01075440
319314
Gammaproteobacteria
TGT
Thr
>WENV170120953
CENL01027862
210855
Gammaproteobacteria
ACG
Arg
>WENV170121050
CENL01041549
19344
Gammaproteobacteria
GGA
Ser
>WENV170121075
CENL01045565
206655
Gammaproteobacteria
GTC
Asp
>WENV170120932
CENL01025081
260947
Gammaproteobacteria
TTG
Gln
>WENV170121174
CENL01054629
65163
Gammaproteobacteria
CAA
Leu
>WENV170120846
CENL01009463
271667
Gammaproteobacteria
TTT
Lys
>WENV170120773
CENL01002470
448699
Gammaproteobacteria
GCA
Cys
>WENV170120892
CENL01016546
189269
Gammaproteobacteria
CGG
Pro
>WENV170120870
CENL01013112
52896
Gammaproteobacteria
GGA
Ser
>WENV170121028
CENL01039429
271670
Gammaproteobacteria
GGT
Thr
>WENV170121128
CENL01053196
265381
Gammaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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