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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170121007
CENL01037920
168341
Planctomycetota
TCG
Arg
>WENV170121142
CENL01054024
168330
Planctomycetota
GCA
Cys
>WENV170120779
CENL01003134
27474
Planctomycetota
GGA
Ser
>WENV170121148
CENL01054026
278515
Planctomycetota
CTT
Lys
>WENV170121131
CENL01053331
401574
Planctomycetota
GCC
Gly
>WENV170121156
CENL01054248
178293
Planctomycetota
GAC
Val
>WENV170121057
CENL01043528
267647
Planctomycetota
TGT
Thr
>WENV170121144
CENL01054026
168335
Planctomycetota
CCG
Arg
>WENV170121154
CENL01054247
168347
Planctomycetota
CCT
Arg
>WENV170121178
CENL01054689
52190
Planctomycetota
GAG
Leu
>WENV170121009
CENL01037920
267601
Planctomycetota
TGC
Ala
>WENV170121014
CENL01037920
141785
Planctomycetota
GTT
Asn
>WENV170121318
CENL01105629
370766
Planctomycetota
GGT
Thr
>WENV170121153
CENL01054132
140272
Planctomycetota
TTC
Glu
>WENV170121155
CENL01054247
454160
Planctomycetota
TTG
Gln
>WENV170121090
CENL01049047
168332
Planctomycetota
GGG
Pro
>WENV170121103
CENL01050529
278517
Planctomycetota
GTT
Asn
>WENV170121008
CENL01037920
168340
Planctomycetota
GAT
Ile
>WENV170121146
CENL01054026
42594
Planctomycetota
GCT
Ser
>WENV170121062
CENL01043528
166330
Planctomycetota
>WENV170121179
CENL01054706
382443
Planctomycetota
GCC
Gly
>WENV170121259
CENL01089805
382443
Planctomycetota
GCC
Gly
>WENV170121186
CENL01054722
178291
Planctomycetota
CGG
Pro
>WENV170121033
CENL01039568
178292
Planctomycetota
ACG
Arg
>WENV170120757
CENL01001318
168350
Planctomycetota
GTC
Asp
>WENV170120970
CENL01030597
52188
Planctomycetota
CGA
Ser
>WENV170121145
CENL01054026
267619
Planctomycetota
GAA
Phe
>WENV170121015
CENL01037920
454158
Planctomycetota
CCA
Trp
>WENV170120759
CENL01001318
278516
Planctomycetota
CGT
Thr
>WENV170121141
CENL01054024
107115
Planctomycetota
TAG
Leu
>WENV170120895
CENL01017083
178288
Planctomycetota
>WENV170121140
CENL01054024
454159
Planctomycetota
CCC
Gly
>WENV170121184
CENL01054721
267575
Planctomycetota
TTT
Lys
>WENV170121091
CENL01049047
267606
Planctomycetota
GGC
Ala
>WENV170121143
CENL01054026
178289
Planctomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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