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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170122986
CENO01010443
18310
Bacteroidota
GGA
Ser
>WENV170124261
CENO01119097
139500
Bacteroidota
TGG
Pro
>WENV170124195
CENO01114905
108977
Bacteroidota
TAG
Leu
>WENV170123831
CENO01081724
166497
Bacteroidota
>WENV170123291
CENO01031125
266737
Bacteroidota
TTT
Lys
>WENV170124328
CENO01121525
266737
Bacteroidota
TTT
Lys
>WENV170123634
CENO01060948
139505
Bacteroidota
TAC
Val
>WENV170124075
CENO01105561
50545
Bacteroidota
TAA
Leu
>WENV170124253
CENO01118635
139484
Bacteroidota
TAC
Val
>WENV170124478
CENO01176845
368963
Bacteroidota
CCT
Arg
>WENV170123735
CENO01071634
50342
Bacteroidota
TGA
Ser
>WENV170123800
CENO01078658
194726
Bacteroidota
TGC
Ala
>WENV170123918
CENO01088926
52492
Bacteroidota
TGA
Ser
>WENV170123656
CENO01062671
263627
Bacteroidota
TTG
Gln
>WENV170124449
CENO01162595
138908
Bacteroidota
TGG
Pro
>WENV170124635
CENO01221490
49783
Bacteroidota
TGA
Ser
>WENV170124056
CENO01104114
177164
Bacteroidota
GTC
Asp
>WENV170123046
CENO01015811
169172
Bacteroidota
TGT
Thr
>WENV170122893
CENO01003574
188048
Bacteroidota
GGC
Ala
>WENV170123019
CENO01013364
188048
Bacteroidota
GGC
Ala
>WENV170124314
CENO01120992
188048
Bacteroidota
GGC
Ala
>WENV170124130
CENO01110359
257687
Bacteroidota
TTT
Lys
>WENV170122863
CENO01001738
144149
Bacteroidota
TGG
Pro
>WENV170122916
CENO01004970
144149
Bacteroidota
TGG
Pro
>WENV170124363
CENO01122399
50353
Bacteroidota
TGA
Ser
>WENV170124247
CENO01118257
265540
Bacteroidota
GAA
Phe
>WENV170123639
CENO01060995
371968
Bacteroidota
CCT
Arg
>WENV170124216
CENO01116095
71400
Bacteroidota
GCT
Ser
>WENV170123567
CENO01054973
168483
Bacteroidota
GTT
Asn
>WENV170124089
CENO01107256
18750
Bacteroidota
GGA
Ser
>WENV170124266
CENO01119225
18750
Bacteroidota
GGA
Ser
>WENV170123908
CENO01088313
158985
Bacteroidota
GTC
Asp
>WENV170124441
CENO01158085
89123
Bacteroidota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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